Odobenus rosmarus divergens (Pacific walrus): 101363874
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Entry
101363874 CDS
T05148
Symbol
YTHDC2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oro03041
]
101363874 (YTHDC2)
Enzymes [BR:
oro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101363874 (YTHDC2)
Spliceosome [BR:
oro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101363874 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
Helicase_C
HA2_C
R3H
DEAD
AAA_19
Ank_2
HA2_N
nSTAND3
AAA_22
ATPase
PhoH
AAA_7
AAA_16
AAA_23
UvrD-helicase
AAA_29
T2SSE
ABC_tran
SRP54
Motif
Other DBs
NCBI-GeneID:
101363874
NCBI-ProteinID:
XP_004414391
UniProt:
A0A2U3WXR1
LinkDB
All DBs
Position
Unknown
AA seq
1427 aa
AA seq
DB search
MFRPSSVSPRPPVAGGGGPAQFGPGGGGRAKGLKDIRVDEEVKIAVNIALERFLCGDQRE
MEFPSSFTSTERAFVHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLTHNS
KHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENWEMSKTSWGLNNGIPQIPVKRGE
SEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRI
FCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGILLRTLMAG
DSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSC
PVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQREEKQQTTLTEWYSAQENTFK
PESQRQRTVPNVTEEYDLLDDGGDAVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVD
AFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFSSQVEQLISMGASVHSKASNGWMA
LDWAKHFGQTEVVDLLESYSASLEFGNLDESSLVHTNGSDLSAEDRELLKAYHHSFDDEK
VDLDLIMHLLYNICHGCDAGAILIFLPGYDEIVGLKDRILFDDKRFADNTHRYQVFMLHS
NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML
KMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL
APVNCPIADFLMKAPEPPPALIIRNAIQMLKTIDAMDAWEDLTELGYHLADLPMEPHLGK
MVLCAVVLKCLDPILTIACTLASRDPFVLPAQASQRRAAMLCRKRFAAGTCSDHMALLRA
FQAWQKARCDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFIRARGGGDIRDVNT
NSENWAVVKAALVAGMYPNLVHVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQ
AAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPVRLARNALQKTSSFQAD
GIPNDSSDSEMEDRTTANLAALKLDEWLNFKLEPEAASLLLHLRQKWHSLFLRRMRAPSK
PWSQVDEATTRAIIAVLSTEEQSACLQQPSGIGQRPRPMSSEELPLASSWRSNNSRKTSA
DTEFSDESATAERVLMKSPSPALHPPQKYKDRGILHPKRSTDDRSDQSSVKSTDSSSYPS
PCASPSPPSLGKGSKSPSPRPNMPTRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNQA
FWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWVRKESLPFQF
AHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGDKTATD
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgttcaggccgagcagcgtctccccgcggccgcccgttgctggcgggggcggcccagct
cagttcggccctgggggcggaggccgggccaaggggctgaaggacattcgtgtagacgaa
gaggtgaagatcgcagtcaatatcgctctggagcgcttcctatgcggggatcagagagaa
atggaatttccttcttctttcaccagcactgaaagagcctttgttcatcgattgagtcag
tctcttggtttggtttctaaaagtaaaggaaagggagcaaatagatacctaactgtgaag
aagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgactcataattca
aaacatgctgttaggagcctaattcaaagatttcctgtcaccaataaagagcgtactgaa
cttctgcctaaaacagaaagaggaaatgtgtttgcagttgaagctgaaaactgggaaatg
agcaaaacaagctggggactcaacaatggcatacctcagattccagtgaaaagaggagaa
tctgaatttgattctttcaggcagtctctgcccgtgtttgagaaacaagaagaaattgtt
aaaataattaaagaaaataaagtagttttgattgtaggagaaactggatctggaaagact
acacagattcctcagttccttttagatgattgctttaaaaatggtatcccctgccgtata
ttttgtacccagccaagacggttagcagcaattgctgtggctgaaagagttgctgcagag
agaagggaaaggattggtcaaacaattggatatcagatccgattagaaagcagggtttct
ccaaagacacttctgacattttgcactaatgggatattgcttcgtacgttgatggcagga
gatagtacattgtcaactgtgacacatgttattgtggatgaagtacacgaaagggatcga
tttagtgattttttacttacgaagttaagagatcttttgcaaaagcacccaactttgaaa
cttattctttctagtgccgccttggatgtaaatctttttataagatattttggaagttgt
ccagtgatatatatacagggaagaccatttgaagtaaaagaaatgtttctggaagacatc
ttaagaactactggatacacaaacaaagaaatgctaaaatacaaaaaggaaaaacaacga
gaagagaaacagcaaaccacccttacagaatggtattcagctcaagagaatactttcaag
cctgagtctcagaggcagagaactgttcccaatgtgactgaagagtatgatttattggat
gacggtggtgatgctgtcttcagccagttgacagaaaaagatgtgaattgccttgaacca
tggttaataaaagaaatggatgcttgtctctctgacatatggctacataaagatgttgat
gcctttgctcaggtctttcaccttattttaactgaaaatgttagtgttgattacaggcat
agtgaaaccagtgcaacagctctgatggttgctgcaggacgaggtttttcaagtcaagta
gagcagttaattagtatgggagccagcgttcatagtaaagcatcaaacggctggatggct
ttagattgggctaaacactttggacagactgaagttgtggatcttctagaatcttacagt
gcttcactggaatttggaaatctagatgaaagttctctggttcacacaaacggaagtgac
ctcagtgcagaagacagagagctcctgaaagcttatcatcacagttttgatgatgaaaaa
gtagacttggatttgatcatgcaccttctatacaatatctgccatggttgtgatgctggt
gcaatattaattttcctacctggatatgatgaaattgttggactgaaggatcgcatcctg
tttgatgacaagcggtttgctgacaacacacatagataccaagtctttatgcttcattca
aatatgcaaacatctgatcaaaagaaagtattaaaaaacccacctgctggtgttcgaaaa
ataatcctttccaccaatattgctgaaaccagcatcacagtgaacgatgttgtctttgtt
attgattctggtaaggtgaaagagaaatcctttgatgcactgaattttgttacaatgtta
aaaatggtgtggatttccaaagctagtgccatacaacgaaaaggcagggcagggagatgc
agacctggaatttgtttccgactgttcagtagactccgattccagaatatgttggaattt
cagactccagaacttttgagaatgccattacaggaactttgtttacatactaagctgtta
gccccagtgaattgtcctattgctgatttcctaatgaaagctccagaaccaccaccagct
ctaattataagaaatgctatacaaatgcttaagacaatagatgcaatggacgcatgggag
gatctcactgagctaggctatcatttggctgacctgcccatggagccacatcttggtaaa
atggtcctgtgcgctgtcgtcttaaagtgtctggaccccatcctcacaattgcctgcaca
ctagcctctcgagacccctttgtcctgccagcccaggcctctcagagacgggcggccatg
ctttgtaggaaacgcttcgctgcaggaacttgcagtgaccacatggcccttctcagagcg
ttccaggcatggcagaaagcacgatgtgatggatgggaacgagccttttgtgaaaagaat
tttctttcacaagctaccatggaaataatcattggcatgagaactcaattgcttggtcaa
cttcgagcatcaggttttattagagcacgaggtggtggtgacatccgagatgttaacaca
aattccgagaactgggctgtcgttaaagctgcgttggtggcaggcatgtatcctaattta
gtccatgtggacagagagaatgtagtattgacagggccaaaggagaaaaaagttcggttt
catcccacttcagttctcagtcagcctcaatataaaaagattcctccagccaatggtcag
gctgcagcgattcaggcactgcccacagattggcttatttatgatgagatgaccagagcc
cacagaatagctaatattagatgttgttcggcagtgacccccgtcaccgtgttggtgttc
tgtggaccggtgaggctggcaagaaacgctcttcagaaaacttcctcgtttcaagcggat
ggtattcctaatgacagtagtgacagtgaaatggaagatagaactactgctaatttggca
gctttgaagcttgatgagtggcttaatttcaaactagagcctgaggcagccagtttgctg
ctgcacctccggcagaagtggcacagcttgttcttacgccgaatgagagctccgtctaaa
ccctggtctcaagttgatgaagccaccacacgagccatcatagctgttctcagcaccgaa
gaacagtctgcatgcctacagcagccatctgggataggccagaggccaaggcctatgtct
tcagaagaactccctctggcatcgtcttggaggtcaaataacagtaggaaaacctcagca
gatacggaattttcggatgagtctgcgactgcagaaagagtattgatgaaatctccatct
ccagcgctgcacccacctcagaaatacaaagatagaggaattttacatcctaaacgaagc
accgatgaccgatcggatcaatcttctgtgaaatctacagacagcagtagctacccaagt
ccttgtgctagtccttctcctccatccttgggaaagggctcaaaatctccttcaccaaga
ccaaacatgcctactcgatacttcataatgaagagtagcaatttgagaaaccttgaaatt
tctcaacagaagggtatctggtctacaacccctagtaatgagcggaagttaaatcaagcc
ttttgggaaagcagcatggtttacttggtattttctgttcaaggatcgggacatttccag
ggattttctaggatgtcttctgagataggaagggagaagagccaggactggggctcagct
ggactgggaggagtatttaaggtggagtgggtccggaaggaaagtcttccctttcagttt
gctcaccacttactcaatccctggaacgacaacaagaaagtccagatcagcagagatggg
caggaactagagcctcaggttggtgaacagttgctgcagttatgggaacgccttccactg
ggagacaaaactgcaactgactga
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