Odobenus rosmarus divergens (Pacific walrus): 101364808
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Entry
101364808 CDS
T05148
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03030
DNA replication
oro03420
Nucleotide excision repair
oro03430
Mismatch repair
oro03440
Homologous recombination
oro03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101364808 (RPA1)
03420 Nucleotide excision repair
101364808 (RPA1)
03430 Mismatch repair
101364808 (RPA1)
03440 Homologous recombination
101364808 (RPA1)
03460 Fanconi anemia pathway
101364808 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oro03000
]
101364808 (RPA1)
03032 DNA replication proteins [BR:
oro03032
]
101364808 (RPA1)
03400 DNA repair and recombination proteins [BR:
oro03400
]
101364808 (RPA1)
Transcription factors [BR:
oro03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101364808 (RPA1)
DNA replication proteins [BR:
oro03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101364808 (RPA1)
DNA repair and recombination proteins [BR:
oro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101364808 (RPA1)
MMR (mismatch excision repair)
101364808 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
101364808 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
A_deaminase
Motif
Other DBs
NCBI-GeneID:
101364808
NCBI-ProteinID:
XP_012419132
UniProt:
A0A9B0GQ35
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVGHLSEGAIAVIMQQGDTSIKPILQVINIRPIITGTSPPRYRLLMSDGLNTLSSFMLAT
QLNPLVEEEQLSSNCICQINRFIVNTLKDGRRVVILMELEILKSAEAVGLKIGNPVPYNE
GHGQQQIVPSSVSAANPPASKPQQQNGSSAMGSTASKTYGVSKTLGKAGGTSLVNSSGGT
QVKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLIDMNKVYYISKGTLKIANKQFTAVKNDYEMTFNNETSVMPCEHGHHLPTVQF
DFTGISELENKPKDSLIDIIGICKSYEDATKITVKSNNREVSKRNIYLMDMSGKVVTTTL
WGEDADRFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTVIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGIGGSNTNWKTLYEVKSENLGHGDKADYFSSVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDSEFPSFKYRMILSVNIADFQENQWVTCFQESAETII
GQSTAYLGELKEKNEQAFEEVFQNANFRSFTFRIRVKLETYNDESRIKATVMDVKPVDYR
EYSRRLIMNIRRNALM
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtgggccacctgagcgagggggccattgcggtcataatgcaacagggagatacatcc
ataaaacccatcctccaagtcattaacatccgtcccattattacagggactagtccaccc
cgttatcgactgcttatgagtgatggattgaacactctatcctctttcatgttggcaaca
cagttgaaccctctggttgaggaagaacaattgtctagcaattgtatttgccagattaac
cgattcattgttaacactctgaaagatggaaggagagtggttattttgatggagttagag
attttgaaatccgctgaagcagttggattaaagattggcaatcccgtgccctataatgaa
ggacatgggcagcagcagatagttccttcctcggtctcagcggccaacccaccagccagc
aagccccagcagcagaatggaagctcagcaatgggttccactgcatctaagacttacggt
gtctcaaagacacttggaaaagctggaggtaccagcctcgtgaacagttctggaggaacg
caggtcaaagtggtacccattgccagcctcaccccttaccaatccaagtggactatctgt
gctcgagttaccaacaaaagtcagatccgtacctggagcaattcccgaggggaagggaag
cttttctccatagaactagttgatgaaagtggtgaaatcagagctactgctttcaatgag
caagtggacaagttctttccccttatcgacatgaacaaggtctattatatctccaaaggc
accctgaagattgctaacaaacagttcacagctgttaaaaatgactatgagatgaccttc
aacaatgagacttctgtcatgccctgtgaacatggtcatcatttacctacagttcagttt
gatttcacagggattagtgagctggagaacaagcctaaagactcacttatagacataatt
gggatctgcaagagctacgaagatgccaccaaaatcacagtgaaatctaacaacagagaa
gtttctaagcgaaatatctatttgatggacatgtcagggaaagtggtcaccactactctg
tggggggaggatgctgatagatttgatggttctagacaacccgtgatggctatcaaagga
gccagagtttctgattttggtggacggagcctctctgtactgtcttcaagcacggtcatt
gtgaatcctgacatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggtgtttccatctctgatctaaagagtggaggaataggagggagcaacacc
aactggaaaactttatatgaggttaaatcagagaacctgggccatggtgacaaggccgac
tactttagctctgtggcgacagtagtgtatcttcgcaaagagaactgtatgtatcaggcc
tgcccaactcaggactgcaataagaaagtgattgaccaacagaatggattataccgctgt
gaaaagtgtgacagtgaatttcccagcttcaagtaccgcatgatcctgtcagtaaatatt
gctgattttcaagagaatcagtgggtcacttgtttccaggagtctgcagagaccatcatt
ggacaaagcactgcttatcttggggagttaaaagagaagaatgagcaagcatttgaggaa
gttttccagaatgccaacttccgatctttcacattcaggatcagggtgaaactggagacc
tacaatgacgagtctcgaattaaggccaccgtgatggacgtgaagccggtggactacaga
gaatatagcagaaggctgatcatgaacatcaggagaaacgcgctgatgtga
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integrated database retrieval system
