Odobenus rosmarus divergens (Pacific walrus): 101366517
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Entry
101366517 CDS
T05148
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04151
PI3K-Akt signaling pathway
oro04510
Focal adhesion
oro04512
ECM-receptor interaction
oro04820
Cytoskeleton in muscle cells
oro04926
Relaxin signaling pathway
oro04933
AGE-RAGE signaling pathway in diabetic complications
oro04974
Protein digestion and absorption
oro05146
Amoebiasis
oro05165
Human papillomavirus infection
oro05200
Pathways in cancer
oro05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101366517 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101366517 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101366517 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101366517 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101366517 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
101366517 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101366517 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
101366517 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101366517 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
101366517 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101366517 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oro04147
]
101366517 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
oro00536
]
101366517 (COL4A3)
Exosome [BR:
oro04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101366517 (COL4A3)
Glycosaminoglycan binding proteins [BR:
oro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101366517 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101366517
NCBI-ProteinID:
XP_004409818
UniProt:
A0A2U3WLJ3
LinkDB
All DBs
Position
Unknown
AA seq
1670 aa
AA seq
DB search
MRPGTAPRSPALLLPLLLVLLAAAPTTGKGCVCKDKGPCFCDGIKGEKGEKGLPGPAGSP
GQKGFPGPEGLPGPQGPKGSPGLPGLTGPKGVRGITGLPGFSGPPGLPGTPGHPGPYGPA
GVPGCNGSKGEQGFPGLPGTPGYPGIPGAVGLKGEKGAPAAGGIELDGRGDPGLPGAPGF
QGLPGLPGFPGPVGPPGPPGFSGFPGTMGPPGPKGHMGDKVIGQKGERGVKGLTGPPGPP
GTVIVTLTGPDNRTDLKGEKGDKGALGKSGPPGPSGPPGESYESQKGAPGEPGPQGKPGE
DGAPGFPGTEGSKGNRGFPGLRGKDGIKGWKGDIGPPGFRGPTEYYDSYQEKGDEGLPGP
PGPKGARGPQGPSGSPGVPGSAGSLRLGPRGAPGSPGVKGSKGERGPPGDNAVGPPGSPG
CPGLPGPIGLPGYPGPPGDIVFRKGPPGDGGLPGLVGFPGIPGADGPKGEPGLLCIQCPC
VPGPAGLPGLPGLDGIKGVPGGQGPSGIKGSPGSPGSTGLPGFPGFPGAPGDPGLNGEKG
GASPPEGEVGAPGDPGLRGHPGRRGLDGTPGTPGVKGSPGPKGERALSGEKGDQGPPGYP
GTPGSPGPAGPPGPSNYGPQGEPGPKGTQGVPGAPGPRGEAGPKGEFVISTPVPGPPGPP
GPPGRAGPQGPPGVPGSIGKCVDPGLPGPDGEPGIPGIGFPGPPGPKGEQGFPGAKGAPG
CPGEMGKPGSPGEPGLPGAKGEPGLAMPGEPGTPGFPGERGGSGENGEIGLPGPPGLPGI
PGTGGLDGPQGDPGKPGPPGEKGPPGRCMEGPRGAQGLPGLNGLEGQQGRRGETGPKGDP
GIPGLDRSGFPGEPGPPGMPGHRGEMGPPGQKGYPGNPGFFGLPGEKGLMGMMGYPGNTG
PPGPPGNPGTPGQRGSFGIPGAKGEKGPPGAKGEEGDKGPRGPSQISNLLGDKGEPGLKG
SAGKPGEKGNRGIPGLPGLKGLEGPPGPPGPPGLRGDPGSTGNPGEPGLHGRPGSMGNMG
VPGPKGQRGTLGPPGLTGRTGLPGVHGLQGDKGEPGYSPGTRPGPTGPKGDPGLPGDTGR
KGERGLPGTAGHSGPTGTEGAPGHPGSPGHPGKPGPDGDLGLKGIKGFPGSPGVKGPPGP
PGFLGSPGPMGMRGSQGHDGIPGPAGEKGETGLLGAHPGPRGSPGAPGAKGDRGAPGLPG
LPGRKGAVGDAGPQGPPGVTGLPGPPGFPGAIIPGQKGNRGPPGFRGNPGEPGPPGPPGS
HVRGIKGDKGLMGEPGPRGLPGTVGAEGPPGPPGAPGSPGLPGLRGDPGFHGFPGVKGEK
GNPGFRGPAGPPGQIGPKGPPGVRGDPGTIKIISLPGSPGPPGRAGGPGMQGKPGPPGPP
GILGPCGPRGKPGKDGRPGTPGPIGGKGNKGCKGGQGPPGSDGLPGLKGKPGHIGPPATV
TMMRGFIFTRHSQTTAIPSCPEGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTM
PFLFCNINDVCNFASRNDYSYWLSTPAPMPTDMAPITGRALEPYISRCTVCEGPTNAIAI
HSQTTDIPSCPDGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
ACNYYSNSYSFWLASLNPQRMFRKPIPSTVKAGELEKIISRCRVCMKRRQ
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccggcacggcgcccaggtcgcccgcgctgctactgccgctcctgctggtgctc
ctggcggcggcgcccaccacaggcaagggttgtgtctgtaaagacaaaggcccgtgcttc
tgtgatgggatcaaaggggagaagggggagaaaggccttcctggacctgctggttctcct
ggccagaagggattcccaggtcccgaaggcttgcctggaccacagggacccaagggctca
ccaggactcccaggactcactggtcccaaaggtgtgaggggaataactggattgccggga
ttttcaggtcctcctggactgccaggcacccctggccatcctgggccttatggacctgct
ggtgtcccaggatgcaatgggtctaagggtgagcaagggtttccaggccttccggggaca
ccaggctacccggggatcccaggtgctgttggtttgaaaggagaaaagggtgctcctgct
gcaggaggtatagaacttgatggaagaggtgaccccgggttgccaggagctccgggattc
cagggtttgccaggccttccaggctttccaggacctgttggtccacctggccctccggga
ttctctggctttccaggaaccatgggacctccaggacctaagggtcacatgggcgataaa
gtgataggacaaaaaggagagcggggtgtgaaaggattaacaggaccccccggaccacca
ggaacggttattgtgacgctaacaggcccagataacagaacggacctcaagggggagaag
ggagacaagggagccctggggaaatccggacctcctggaccctcaggaccacctggagaa
tcttatgaatctcaaaaaggtgctcctggagaacctggcccacagggaaaacctggcgaa
gatggtgcccctggtttccctggcactgagggatccaaaggcaacaggggcttccctggg
ttacggggtaaagacggcattaaggggtggaaaggggacattggccctccaggatttcgt
ggtccaacagaatattatgattcataccaggaaaagggagatgaaggacttccaggccca
ccagggcccaaaggagctcgtggcccacagggtcccagcggctcccctggggttcccgga
agtgctgggtcattgaggcttggccccagaggagcccctggatctccaggagtgaaagga
agtaaaggggaacgggggcccccaggagacaacgcagtggggcctcctgggtccccaggt
tgtcctggtttgccaggccctatagggctgccaggatatccaggaccaccaggtgacatc
gtctttcgcaaaggtccacctggagatggtggactcccaggccttgtagggtttccagga
atcccaggagccgatgggcccaaaggggaacctggccttttgtgcatacaatgtccttgt
gtcccagggcccgcgggtctcccaggactgccagggttggacggcataaaaggagtccca
ggaggacaagggccatctggcattaaaggaagccccgggtccccaggaagtacgggtctt
ccaggatttccaggattcccgggtgctccgggggatccaggacttaacggagaaaaaggt
ggagcgtctccgcctgagggagaagtgggtgccccaggggaccccgggctcagagggcat
cctggaagaaggggcttggatggaactcctggaactcccggggtcaaagggtcaccaggg
cccaaaggtgaacgggccctgagtggtgagaagggggaccagggtcctccagggtatcct
ggcacccctgggtccccaggacctgcaggaccacctggaccatcaaactatggaccacag
ggagagcctggtccaaagggcacccaaggagttcctggagcccctggaccacgtggagaa
gccggtcctaagggagaattcgttatttcgacaccagtcccagggcccccaggacctcca
gggccccctggccgtgctggcccccaaggtccacctggtgtccctggatccataggaaaa
tgtgttgatccgggtcttcctgggcctgatggcgaaccaggaattccaggaatcggcttc
cctgggccccctggacctaagggagagcaaggttttccaggagcaaaaggagcgccgggt
tgtccaggagaaatggggaagcccgggtcacctggagaaccgggtctcccaggagccaag
ggagaaccaggactagccatgcctggagagccaggtacaccaggttttccaggagaaaga
ggcggttctggggaaaatggagaaattggactccctggacctccaggtctccctgggatt
ccaggaactggagggcttgatggaccccaaggagatccagggaagcctggaccacctgga
gaaaaaggacccccaggaaggtgcatggagggtcccaggggggcccaaggacttccagga
ttaaatgggttggaagggcaacaaggcagaagaggtgaaacagggccaaagggagaccca
ggtattccaggcttggataggtcaggctttcctggagaacctggaccaccaggaatgcca
ggtcatcgaggtgaaatggggccacctggtcaaaaaggatatccaggaaatccaggattt
tttggactaccaggtgaaaaaggactgatggggatgatgggctatccgggaaatactggc
cctcctgggccccccggaaacccaggcaccccaggacagaggggtagctttggaattcca
ggagcaaagggtgagaaagggcccccaggagccaagggggaagaaggagataaaggacct
cgggggccttctcaaatatccaatttgctgggggacaaaggagaaccgggcctcaaagga
tctgctggaaagcctggtgagaaaggaaacagaggcattccagggttaccaggtttaaaa
ggactggaaggaccacctggaccaccaggtccaccaggcctcaggggagatccaggcagc
actgggaatcctggagaaccaggactgcatggcaggccaggaagcatggggaacatgggg
gtgccaggtcctaaaggacaaaggggaactttgggaccaccaggtttaactggaagaacg
ggtctcccaggtgttcatggtctccaaggagataagggagagccaggttattcgccaggt
acaaggccaggaccaacaggaccaaagggagatccaggattgccaggtgacacaggaagg
aaaggagagagagggctccctggcaccgctggacattcgggccctactggaactgaggga
gcccctggacatcccggaagtcctggccatccaggcaagccgggccctgatggtgatttg
gggttaaaaggcatcaaaggcttccctggttctccgggagtcaaaggccctccaggacct
ccaggatttctaggatctcctggaccaatgggtatgagaggcagccagggacatgatgga
attcctggtccagcaggagaaaagggagaaacaggtttgctgggggcacatccaggcccg
agagggagccctggtgctccaggagccaaaggagacaggggcgccccgggcttacctggc
ctcccgggcaggaaaggggcagtgggagatgcggggccacagggaccccctggcgtgaca
ggactcccagggccaccaggttttcctggcgcaatcatccctggccagaaaggaaatcga
ggcccaccaggcttcagaggaaacccaggtgagcctggtcctccgggacctccagggagc
cacgtaagaggcatcaaaggagacaagggactcatgggcgagcctggccccaggggtctg
cccggaactgtaggagccgaggggccaccgggtccgccgggagcaccaggaagcccaggt
ctgccagggctcagaggtgatcctggattccatggatttccaggtgtgaaaggggagaag
ggtaatccgggatttcgaggaccagctggacctccagggcaaattgggccaaaaggacca
cccggtgtacgtggagaccctggcaccattaagatcatctcccttccaggaagcccaggg
ccacctggccgtgctggaggaccaggaatgcaaggaaaacctgggccaccagggccacca
ggaatcctaggaccctgtgggccaagaggtaaaccaggcaaggatggaagaccaggaact
cctgggccaattggaggaaaaggaaacaaaggttgtaaaggagggcaaggaccacctgga
tcagatggactgccaggcttgaaggggaaacctggacacattggaccacctgcaactgtg
acaatgatgagaggctttatcttcaccaggcatagtcagaccacagcgattccctcctgt
ccagaagggacagagccgctctatagtgggttttctcttctctttgtacaaggaaatgaa
caagcccatggacaagacctgggaactcttggcagctgtctgcagcggtttaccacaatg
ccattcttgttctgtaacatcaatgatgtatgtaattttgcatctcgaaatgattattca
tactggctgtcaactccagctccgatgccgacggacatggctccaattactggcagggcc
ttagagccttatattagcagatgcactgtctgtgaaggtcctacgaatgccatagccatt
cacagccaaaccactgacattccctcatgtcccgatggctggatttctctctggaaagga
ttttcgtttatcatgttcacaagtgcgggttctgagggcgctgggcaagcactggcctcc
cctggctcttgcttggaagaattccgagccagtccatttatagaatgtcatggaagagga
gcgtgcaactactattcaaattcctacagtttctggttggcttcattaaacccccaaaga
atgttcagaaaacctattccatcaactgtgaaagctggggagttagaaaagataataagt
cgctgtcgggtgtgcatgaagagaagacaatga
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