KEGG   Odobenus rosmarus divergens (Pacific walrus): 101369653
Entry
101369653         CDS       T05148                                 
Symbol
DDB1
Name
(RefSeq) DNA damage-binding protein 1 isoform X1
  KO
K10610  DNA damage-binding protein 1
Organism
oro  Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03420  Nucleotide excision repair
oro04120  Ubiquitin mediated proteolysis
oro05161  Hepatitis B
oro05170  Human immunodeficiency virus 1 infection
oro05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:oro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101369653 (DDB1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    101369653 (DDB1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    101369653 (DDB1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    101369653 (DDB1)
   05161 Hepatitis B
    101369653 (DDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:oro04121]
    101369653 (DDB1)
   03400 DNA repair and recombination proteins [BR:oro03400]
    101369653 (DDB1)
Ubiquitin system [BR:oro04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Adoptor protein
     101369653 (DDB1)
DNA repair and recombination proteins [BR:oro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101369653 (DDB1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      101369653 (DDB1)
SSDB
Motif
Pfam: CPSF_A Beta-prop_RSE1_1st Beta-prop_RSE1_2nd Beta-prop_RIG_2nd Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 101369653
NCBI-ProteinID: XP_004410127
UniProt: A0A2U3WMB2
LinkDB
Position
Unknown
AA seq 1193 aa
MPRAPAALACNVSLGRRQRQWSSPRAGGGPCLFACVHFSIVALECRRAVPDLDMSYNYVV
TAQKPTAVNGCVTGHFTSAEDLNLLIAKNTRLEIYVVTAEGLRPVKEVGMYGKIAVMELF
RPKGESKDLLFILTAKYNACILEYKQSGESIDIITRAHGNVQDRIGRPSETGIIGIIDPE
CRMIGLRLYDGLFKVIPLDRDNKELKAFNIRLEELHVIDVKFLYGCQAPTICFVYQDPQG
RHVKTYEVSLREKEFNKGPWKQENVEAEASMVIAVPEPFGGAIIIGQESITYHNGDKYLA
IAPPIIKQSTIVCHNRVDPNGSRYLLGDMEGRLFMLLLEKEEQMDGTVTLKDLRVELLGE
TSIAECLTYLDNGVVFVGSRLGDSQLVKLNVDSNEQGSYVVAMETFTNLGPIVDMCVVDL
ERQGQGQLVTCSGAFKEGSLRIIRNGIGIHEHASIDLPGIKGLWPLRSDPNRETDDTLVL
SFVGQTRVLMLNGEEVEETELMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALV
GEWKEPQGKNISVASCNCSQVVVAVGRALYYLQIRPQELRQISHTEMEHEVACLDITPLG
DGNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALG
DGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSNHKLV
FSNVNLKEVNYMCPLNSDGYPDSLALANNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQ
EVSQCFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVE
VHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGR
IVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASINSTVRLYEWTTEKELRTECNHYN
NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDDNFLG
AENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETSTPTQGS
VLFGTVNGMIGLVTSLSESWYNLLLDMQNRLNKVIKSVGKIEHSFWRSFHTERKTEPATG
FIDGDLIESFLDISRPKMQEVVANLQYDDGSGMKREATADDLIKVVEELTRIH
NT seq 3582 nt   +upstreamnt  +downstreamnt
atgcctcgcgccccggccgctctggcctgcaacgtgtctctggggcggaggcagcggcag
tggagttcgccgcgcgcgggtgggggcccctgtctcttcgcctgtgtccatttctctatc
gttgcgctcgagtgccgacgggccgtcccagacctcgacatgtcgtacaactacgtggta
acggcacagaagcccaccgccgtgaacggctgcgtgaccggacactttacttcagctgaa
gacttgaacctgttgattgccaaaaacacgagattagagatctatgtggtcactgctgag
gggcttcggcccgtcaaagaggtgggcatgtatgggaagattgcagtcatggagcttttc
aggcccaagggcgagagcaaggacctactgtttatcctgacagctaaatacaatgcctgc
atcttggagtataagcagagtggcgagagcattgatatcataacgcgagcccatggcaat
gtccaggaccgtattggccgcccctcggagacgggcattattggcatcatcgaccctgaa
tgccggatgattggcttgcgactctatgatggccttttcaaggttattccgctagatcgg
gacaataaagagctcaaggcctttaacatccgcctcgaggagctgcatgtcatcgacgtc
aagttcctgtatggttgccaagcacctaccatctgctttgtctaccaggaccctcagggg
cggcacgtgaaaacctacgaggtgtctctccgggagaaggagttcaataagggcccttgg
aaacaggaaaacgtagaagctgaagcttccatggtgattgcagtcccagagcccttcgga
ggggccatcatcattggacaggaatcaatcacctatcacaacggtgacaaatacctggca
attgcccctcctatcatcaagcaaagcacgattgtgtgtcacaatcgtgtggaccccaat
ggttcccgctatctgctgggagacatggaaggacggcttttcatgctgcttttggagaag
gaggaacagatggatggcactgtcaccctcaaagatctccgtgtggagctcctcggagag
acctctattgctgaatgcttgacgtacctcgataacggtgttgtgttcgttgggtctcgc
cttggggactcccagcttgtgaagctcaatgttgacagcaatgaacaaggctcctatgta
gtggccatggaaacatttaccaatttaggacccatcgtggacatgtgcgtggtggacctg
gagaggcaggggcagggacagctggttacttgctctggggctttcaaggaaggttccttg
aggatcatccggaacggaattggaatccatgagcatgccagcattgacttacccggcatc
aaaggtctgtggccactgcgctctgaccctaaccgggagactgatgacactctggtgctc
tcctttgtgggccagacgagagttctcatgttaaacggagaagaggtggaagaaactgaa
ctgatgggtttcgtagatgatcagcagactttcttctgtggcaacgtggctcatcagcaa
ctcatccagataacttcagcatctgtgaggttggtctctcaggaacccaaagctctggtc
ggtgagtggaaggagcctcagggcaagaacatcagtgtggcctcctgcaattgcagccag
gtggtggtagcggtgggaagggccctctattacctgcagatccgtcctcaggagctccgg
cagatcagccacacagagatggaacatgaagtggcctgcttggacatcaccccactgggg
gacggcaatgggctgtcccctctttgtgccattggcctctggacagacatctcggcgcgt
atcttgaagctgccctcttttgagctactgcacaaagagatgctgggtggagagatcatt
cctcgttccatcctgatgaccacttttgagagtagccactacctcctttgtgccttggga
gatggggcgcttttctacttcgggctcaacattgagacaggcctgttgagcgaccgtaag
aaggtgactctgggcacccagcccacggtattgaggactttccgttctctttctaccacc
aacgtctttgcttgctctgaccgccccactgtcatctacagcagcaaccacaaattggtc
ttctccaatgtcaacctcaaggaagtcaactacatgtgtcccctcaactctgatggctat
cctgacagcctggcactggccaacaacagcaccctcaccattggcaccatcgacgagatc
cagaagctgcacatccgcacagttcccctctacgagtctcccaggaagatctgctatcag
gaagtgtcccagtgcttcggggtcctctccagccggatcgaagtccaggacacaagtggc
ggcacaacggccctgaggcccagtgccagcacccaggccctgtccagcagcgtcagctcc
agcaagctgttctccagcagcacggcaccacacgagacctcctttggagaagaggtggag
gtgcacaatctcctcatcatcgaccagcacaccttcgaagtgcttcatgcccaccagttc
ctgcagaatgagtatgccctcagcctggtctcctgcaagctgggcaaagaccccaacacg
tacttcatcgtgggcacggccatggtgtatcctgaagaggcggagcccaagcagggtcga
atcgtggtctttcagtattctgacggaaaactacagaccgtggccgagaaggaagtgaaa
ggagccgtgtactccatggtggaattcaacggcaagctgttagccagcatcaacagcacg
gtgcggctttatgagtggacaacggaaaaggagcttcgcaccgagtgcaatcactacaac
aacatcatggccctctacctgaagaccaagggcgacttcatcctggtgggcgacctgatg
cgctcagtgctgctgcttgcctacaagcccatggaggggaactttgaagagattgctcga
gactttaatcctaactggatgagtgctgtggaaatcttggatgatgacaatttcctgggg
gctgaaaatgcctttaacttgtttgtgtgtcagaaggatagcgctgccaccactgacgag
gagcggcaacacctccaggaggtcggtctcttccatctgggcgagttcgtcaacgtcttt
tgccacggctccctggtcatgcagaatctgggcgagacgtccacccccacgcagggctcg
gtgctctttggcacagtcaacggcatgatcgggctggtgacctcgctgtcagagagctgg
tacaacctcctgctggacatgcagaatcggctcaataaagtcatcaagagtgtgggcaag
atcgagcactccttctggagatcttttcatactgagcgaaagacagaaccagccacgggc
ttcatcgatggagacttgatcgagagtttcctggacatcagccggcccaagatgcaggag
gttgtggcaaacctacagtatgatgatggcagcgggatgaagcgagaggccacagcagat
gacctgatcaaggttgtggaggagctgacgcggatccattag

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