Odobenus rosmarus divergens (Pacific walrus): 101370054
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Entry
101370054 CDS
T05148
Symbol
PARN
Name
(RefSeq) poly(A)-specific ribonuclease PARN isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101370054 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oro03019
]
101370054 (PARN)
Enzymes [BR:
oro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
101370054 (PARN)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
101370054 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
RRM_Thc1
NCBP3
RRM_1
T6PP_C
Motif
Other DBs
NCBI-GeneID:
101370054
NCBI-ProteinID:
XP_004408976
UniProt:
A0A2U3WJF9
LinkDB
All DBs
Position
Unknown
AA seq
638 aa
AA seq
DB search
MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVTALTNGFDTPEERYQKLKKH
SMDFLLFQFGLCTFKYDHTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG
FDFNKVFRNGIPYLNQEEERQLREQYDEKRLQSNGAGTLSYVSPNTSKCPVTIPEDQKKF
IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVDTLETEKKERYIV
ISKVNEEERKRKEQQKLAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQF
CCPLPVDLNEFKEMTTCVFPRLLDTKLMASTQPFKDIINNTSLAELEKRLKETPFNPPKV
ESAEGFPSYDTATEQLHEAGYDAYITGLCFISMANYLGSFLSPPKIHVSARSKLIEPFFN
KLFLMRVMDIPYLNLEGPDLQPKRDHVLHVTFPKEWKTSDLYQLFSAFGNIQISWIDDTS
AFVSLSQPEQVQIAVNTSKYAESYRIQTYAEYVGKKHKEKQIKRKWTEDTWQEDERKRLN
TQCISYALQNHYYHTNSLTATSAVGKRNLSPSPAEADLEARISGDISDPELEQTESCAEP
LSEGRKKAKKLKRMKKDLSPAGGIPDSPAKLFEVPDTW
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggagataatcaggagcaattttaagagtaatcttcacaaagtgtaccaggccatagag
gaggccgacttcttcgccatcgatggggagttttcaggaatcagtgatggaccttcagtc
actgcattgacaaatggttttgacactccagaagaaaggtatcagaagcttaaaaagcat
tccatggactttttgctgtttcagtttggcctttgcacttttaagtatgaccacacagat
tcaaagtatataacaaagtcatttaacttctatgtattcccgaaacccttcaatagatcc
tcaccagatgtcaagtttgtttgtcagagctcaagcattgactttctagcaagccaagga
tttgattttaataaagttttccgcaatggaatcccatatttaaatcaggaagaggaaaga
cagttaagagaacagtatgatgaaaaacgtctgcagtccaatggcgcaggaactctgtct
tatgtatcaccaaatacttccaaatgtcctgtgacaattcctgaagaccagaagaagttt
attgaccaagtggtagagaaaatagaagatttattacaaagtgaagaaaacaagaacttg
gatttagagccatgtactgggttccaaagaaaactaatttatcagactttgagctggaag
tatcccaaaggcattcacgttgacactttagaaactgaaaagaaagagcgctacatcgtc
atcagcaaagtaaatgaagaagagcgtaagaggaaggagcagcagaaactcgctaaggaa
caggaagaactgaatgatgctgtgggattttctagagtcattcatgccattgccaattcg
ggaaaactcgttattggacacaacatgctcttggatgtcatgcacactgttcatcagttc
tgctgccctctgcctgtggacctaaatgagtttaaggagatgacgacatgtgttttcccc
agactcttggatacaaaattgatggccagcacacaaccttttaaggatatcattaacaac
acatcccttgcagaattggaaaagcggttaaaagagacgcctttcaaccctcctaaagtt
gaaagtgcagaaggctttccaagttatgacacagctactgaacagctccacgaggcaggc
tatgatgcttatatcacagggctgtgcttcatctccatggcgaactacctaggttctttc
cttagccctccaaaaattcatgtgtctgccagatcaaaactcattgaacctttttttaac
aagttatttcttatgagagtcatggatatcccctatctaaacttggaaggaccagacttg
caaccgaaacgtgatcatgttctccatgtgactttccccaaagagtggaaaaccagcgac
ctttaccagctttttagtgcctttggtaacattcagatatcctggattgatgacacatca
gcatttgtttctctcagccagcccgaacaagtgcagattgctgtcaataccagcaaatat
gcagaaagctatcggatccagacctacgccgaatatgtggggaaaaaacacaaggagaag
cagatcaagagaaagtggacagaagatacttggcaggaggatgagagaaaacggttaaac
actcagtgcatatcctatgctctgcagaatcactactaccacaccaatagtcttacagcg
accagtgctgtaggaaagagaaacctgagtcccagcccagcagaagctgacttggaggcc
agaatatcgggggatatttctgaccctgagctcgaacagacagagtcctgtgcagaaccc
ctctctgagggaaggaaaaaggccaagaaattaaaaagaatgaagaaggacctttcacca
gcaggaggcatccccgacagccctgccaagctcttcgaggtccccgacacgtggtaa
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