Odobenus rosmarus divergens (Pacific walrus): 101370480
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Entry
101370480 CDS
T05148
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04151
PI3K-Akt signaling pathway
oro04510
Focal adhesion
oro04512
ECM-receptor interaction
oro04518
Integrin signaling
oro04974
Protein digestion and absorption
oro05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101370480 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101370480 (COL2A1)
04518 Integrin signaling
101370480 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101370480 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101370480 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101370480 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oro00536
]
101370480 (COL2A1)
Glycosaminoglycan binding proteins [BR:
oro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101370480 (COL2A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
VWC2L_2nd
Motif
Other DBs
NCBI-GeneID:
101370480
NCBI-ProteinID:
XP_004396017
UniProt:
A0A2U3VLX5
LinkDB
All DBs
Position
Unknown
AA seq
1487 aa
AA seq
DB search
MIRFGAPQTLVLLTLLVAAVLRCHGQDVQKAGSCVQDGRRYNDKDVWKPEPCRICVCDTG
TVLCDDIICEDMKDCLSPETPFGECCPICSTDLATASGQPGPKGQKGEPGDIKDIVGPKG
PPGPQGPAGEQGPRGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFA
AQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMG
PRGPPGPPGKPGDDGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKG
EAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVG
PAGGPGFPGAPGAKGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKG
SAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQG
APGPAGEEGKRGARGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAG
PKGANGDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPG
VMGFPGPKGANGEPGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPG
PSGFQGLPGPPGPPGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRG
LPGTPGTDGPKGASGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPG
KDGGRGLTGPIGPPGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPG
ADGQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPG
AAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPG
EDGPSGPDGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPG
PVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRGETGAVGAPGAPGAPGSPGPAG
PTGKQGDRGEAGAQGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQG
LPGPPGPSGDQGASGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAG
PPGNPGPPGPPGPPGPGIDMSAFAGLGQREKGPDPLQYMRADQAAGDLRQHDAEVDATLK
SLNNQIESLRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETG
ETCVYPNPANVPKKNWWSSKSKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRL
LSTEGSQNITYHCKDSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTK
HTGKWGKTLIEYRSQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcttcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc
cttcgatgtcacggccaggatgtccagaaggccggcagctgtgtgcaggacgggcggagg
tataatgataaggatgtgtggaagcccgagccctgccggatctgtgtctgtgacactggg
accgtgctctgtgacgacataatctgtgaagacatgaaagactgcctcagccccgagacc
cccttcggagagtgctgccccatctgctcaactgacctcgccacggccagtgggcaacca
ggaccaaagggacagaaaggagaacccggagacatcaaggatattgtaggacctaaagga
cctcctgggcctcagggaccagcaggtgaacaaggacccagaggtgatcgtggtgacaaa
ggtgaaaaaggtgcccctggacctcgtggcagagatggagagcctgggacccctggcaat
cctggcccccctggtccgcctggcccccctggcccccctggccttggtggaaactttgct
gcccagatggctggaggatttgacgagaaggctggtggcgcccagatgggagtgatgcaa
gggccgatgggccccatgggacctcggggacctccaggccctgctggtgctcccggacct
caaggatttcagggcaaccctggtgaacccggggaacccggtgtctctggtcccatgggt
ccccgtggtcctcctggcccccctggaaaacctggggatgatggcgaagctggaaagcct
ggaaaatctggtgaaagaggcccccctggccctcagggtgctcgaggcttcccaggaacc
ccaggccttcctggtgtcaagggtcacagaggctacccaggtctagatggtgctaaggga
gaagctggtgctccaggtgtgaagggagagagtggttcaccgggtgagaatggttctccg
ggcccaatgggtccccgcggcctgcctggtgagcgaggacgaactggccctgctggtgct
gcaggagcccggggcaacgacggccaaccaggccccgcaggccctccgggtcccgtgggt
cccgctggtggtcctggcttccctggtgctcccggggccaagggtgaagctggccccact
ggtgctcgcggtcccgaaggcgctcaaggtcctcgcggcgaacctggtactcctgggtcc
cctgggccggccggtgcctctggtaaccccggaactgatggaattcctggagccaaagga
tctgctggtgctcctggcattgccggtgcccccggcttccctgggccccgtggtccacct
ggccctcaaggtgcaactgggcctctgggcccgaaaggtcagacgggcgagcctggtatt
gctggcttcaaaggtgaacaaggccccaaaggagaacctggccctgctggcccccaagga
gcccctggtcctgctggtgaagaaggcaaaagaggtgcccgtggagagcctggtggtgct
gggcccgtcggtccccctggagagagaggtgctcctggcaaccgtggtttcccaggtcag
gatggtctggcaggtccaaagggagcccctggagaacgagggcccagcggccttgctggt
cccaaaggagccaatggtgaccctggccgtcctggagagcctggccttcctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggtccttctggagcc
cccggtgaagatggccgccctggtcctccaggtcctcagggtgctcgtgggcagcctggc
gtcatgggtttccctggccccaaaggtgccaacggtgagcctggcaaggccggggagaag
ggactgcctggtgctcctggtctgagaggtcttcctggcaaagatggtgagacaggtgct
gcaggaccccctggacctgctggacctgcaggtgaacgaggcgaacagggtgctcctggg
ccatctgggttccagggacttcctggccctcctggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgtccccggtgaagctggagcccccggcctcgtgggtcccaggggcgaa
cgaggtttcccaggagaacgtggctctcccggggcccagggcctccagggtccccgtggc
ctccccggcactcctggcacggacggtcccaaaggcgcatctggcccagctggcccccct
ggggctcagggccctccaggtctgcagggcatgccgggagagaggggagcagcgggcatc
gcggggcccaagggagacaggggtgatgttggcgagaaaggccctgagggagcccccggg
aaggacggtggacgaggcctgactggtcccattggcccccctgggcccgctggtgccaac
ggtgagaagggagaagttgggcctcctggtcctgcaggaactgctggtgctcgcggcgcc
ccaggtgaacgcggagagaccggaccccccgggcccgctggattcgcagggcctcccggt
gctgatggccagccaggtgccaagggcgagcaaggagaggccggccagaaaggtgatgct
ggtgccccaggtcctcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggccccccgggagccaccggattccctgga
gctgctggccgcgtcggacccccaggctccaatggaaaccctgggcccccagggccccct
ggtccttctggaaaagatggtcccaaaggcgctcgaggagacagtggcccccctggccgt
gccggtgaccccggtctccaaggtcctgccggaccccctggcgagaagggggagcctgga
gaggatggaccctctggccccgatggtcccccaggtccccaaggtctggctggtcagagg
ggcatcgtcggtctacctgggcagcgtggtgagagaggatttcctggcttgcctggccca
tcgggtgagcccggcaagcagggagctcctggtgcatctggagaccgaggtcctcccggg
cccgtgggtcctcctggcctgaccggtcctgccggtgaacctggacgagagggaagccct
ggtgctgacggcccccctggcagagatggcgcggctggagtcaagggtgatcgtggtgag
accggtgccgtgggtgcccccggagcccccggggcccctggctctcccggccccgccggc
ccgactggaaagcagggagaccgaggagaagctggtgcacaaggccccatgggtcccgca
ggaccggcaggagcccggggaatcccaggccctcaaggcccccggggtgacaaaggagaa
gctggtgaagccggcgagaggggactgaagggacaccgtggattcaccggtctgcagggt
ctgcctggccctcctggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggccctagaggtcctcctggccccgtcggtccctccggcaaagatggtgctaatggaatc
cctggccccatcgggccccctggtccccgtggacgttcaggcgaaactggccctgcgggc
cctcctggaaaccctggaccccctggccctccaggtccccctggccctggcatcgacatg
tctgcctttgctggcctcggccagagagagaagggccccgaccccctgcagtacatgcgg
gctgaccaggcagctggcgacctgagacagcatgatgccgaggtggacgccacgctcaag
tccctcaacaaccagatcgagagcctccgcagccctgagggctcgcgcaagaaccctgct
cgcacctgccgggacctgaaactctgccaccccgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgaacgttcccaagaagaactggtggagcagcaag
agcaaggacaagaaacatatctggtttggggaaaccatcaatggtggcttccacttcagc
tacggtgatgacaacctagctcccaacacggccaacgtccagatgaccttcctgcgcctg
ctgtccaccgagggctcccagaatatcacctaccactgcaaggacagcattgcttacctg
gacgaagcagccggcaacctcaagaaggccctgctcatccagggctccaatgacgtggag
atccgggctgagggcaacagccggttcacatacaccgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactctgatcgagtaccggtcacagaagacctcgcgcctc
cccatcattgacattgcgcccatggacataggagggcctgagcaggaattcggtgtggac
atagggcctgtctgcttcttgtaa
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integrated database retrieval system
