Odobenus rosmarus divergens (Pacific walrus): 101371308
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Entry
101371308 CDS
T05148
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
101371308 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oro04131
]
101371308 (VPS8)
Membrane trafficking [BR:
oro04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101371308 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
TPR_Vps41
zf-RING_Vps41
WD40_CDC20-Fz
zf-RING_11
zf_RING_Vps8_fungal
Clathrin
zf-RING_2
zf-C3H2C3
zf-RING_UBOX
zf-RING_5
GED
zf-C3HC4
EIF3I
PHD
Motif
Other DBs
NCBI-GeneID:
101371308
NCBI-ProteinID:
XP_004406803
UniProt:
A0A2U3WE03
LinkDB
All DBs
Position
Unknown
AA seq
1428 aa
AA seq
DB search
MENEPDHENVEQSPSAKTTEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGK
DQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDA
HPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEP
LHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVA
VHNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKRLHLYYDLINFTWINSRTVVLLDS
VEKLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSY
GGQIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASK
RKAVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLERKDLLFSQ
MYDKLSENSVAKGVFLECLEPYILSDKLVGMTPQVMKDLIVHFQDKKLMENVEALIVHMD
ITSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGRTLTDEQVV
MGNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASLEEEIYPYVRTL
LHFDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLAR
QLAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMA
EKAEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQK
AMDHIEELVSLRPCKAAELVATHFSEQIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQE
LLQMSPCVTEQFIELLCQFSPNQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKG
DIHGAFLIMLQRLQRKLQEITHQDEKAKEELSLKDVEDTMVETIALCQRNSHNLNQQQRE
ALWFPLLEAMMAPQKLSGSAAPHLHPDALKSLTMQVLNSMAAFIALPSILQRILQDPVYG
KGKLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSI
CLQQYKRRQEMADEIIVFSCGHLYHSFCLQNKECTTETEGQTRWTCYKCSSSNKVGKLSE
NSSEIKTGKTAQSQVKMSPSCHPSKGDSAVKKAASEPVLDPQQIQAFDQLCRLYRGSSRL
ALLTELSQNRSSESYRPFSGSQSGPAFNSIFQNENFQLQLIPPPVTED
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagccccagtgccaagactactgaa
gaagagctgaataagtctttcaatcttgaagcttcgctttcaaaattctcttacatagat
ctggacaaggaactggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgatactcctccaacactggaaagcatactcaatgagactgatgatgaagatgag
tcttttgttcttgaggatcctacattgttaaatattgatactatcgattctcactcctat
gatacttcgtctgtggcaagttcggatagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcactccatgggtcagttatgcgacattcacttttgaaggga
atttctgcccagatagtgtctgcagctgacaaagtggatgctggcttgcctacagcaatt
gcagtgtccagtctgatagctgtgggtacatctcatggattggctttaatatttggaaaa
gatcagaatcaagctttgcgactttgtctgggtagcactagtgttggaggtcagtatgga
gccatctctgccctcagtatcaacaatgactgctcaagacttctctgtggctttgctaaa
ggacagatcacaatgtgggatctggccagtggaaaacttctgagatcaataacagatgct
catcctccaggaacagcaatattgcatattaagtttacagatgatccaactcttgcaatt
tgcaatgacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgaga
acatgtgaatcaagatgcctgttcagtggttccaagggtgaggtttgctgtattgagcct
ctccattcgaagcctgagttgaaagatcatcccatcacacagttttccttattggccatg
gcatccttaacaaagatactggtcattggattgaaaccatccttgaaagtgtggatgact
tttccctatggacggatggatccttccagtgttccattgctggcctggcactttgtggca
gtgcataattatgtgaatcccatgcttgccttctgcagaggagatgttgttcattttctg
ttggttaagagagatgagtctggagcaatacatgttactaagcaaaagcgccttcacctc
tactatgacctcatcaactttacttggataaactcacgcacggttgtgctcttggacagt
gtggagaagttgcatgtgattgatcggcagactcaagaggaattggaaacagtggagatc
tcagaagttcagctggtctataacagcagtcatttcaaatccctagccactggaggaaat
gttagccaggcactggctttggttggagagaaggcttgttatcaatccatcagtagctat
ggtggtcaaatcttttatttggggacaaaatctgtttatgtgatgatgctgagaagctgg
agagagagagtggatcatctcctgaaacaagattgtcttacagaagccttggctcttgca
tggtctttccatgaaggaaaagcaaaagcagtagtgggattatccggggatgccagtaag
cgaaaggctgttgttgcagatcgaatggtagaaatcctgttccactatgcagatcgagct
ctgaaaaagtgtccagaccagggaaaaatccaagtgatggagcagcattttcaggacatg
gtgcctgtcatcgttgattactgcctgctgttggagcgaaaggatcttttatttagccag
atgtatgacaaactaagtgagaattcagtggccaaaggagtgtttttggagtgccttgaa
ccatatattttaagtgataaattggtgggaatgaccccccaggtaatgaaagacttgatt
gttcacttccaagataaaaagttaatggaaaatgtggaagccctcattgtacatatggat
atcaccagcctagatattcagcaggtagttctcatgtgttgggaaaatcgtctgtatgat
gctatgatctatgtctacaacagaggcatgaatgaatttattagtccaatggagaaactt
ttcagagtcattgctcctcctctgaatgcaggaaggacgctaacagatgagcaagttgtt
atgggcaacaaacttcttgtatatattagctgttgtctcgcaggcagagcctatcccctt
ggtgacatccctgaagatcttgttcccttggttaaaaaccaggtttttgaatttctgatt
cgcctgcattcagcagaagcgtccctggaggaagaaatctacccgtatgttcggactctg
ctacattttgacacaagagaatttctaaatgtattggcactgacttttgaagattttaaa
aatgacaagcaagctgtagaatatcaacaacgaattgtggatattttgttgaaagttatg
gtggagaattctgattttactccctcacaagtagggtgtctctttacattccttgcccgg
cagcttgcaaagccagacaataccttgtttgtaaacagaaccctttttgatcaggtcctt
gaattcctctgtagtcctgatgatgactcccgacactctgaaagacagcaggtcctttta
gaattgctgcaggctggaggcatagttcagtttgaagagagtcggctcatccgaatggca
gaaaaagcagaattctatcaaatttgcgagtttatgtatgaacgagaacaccaatatgac
aaaataattgattgctacttacgtgacccgctaagggaggaagaagtctttaactacatt
cacaatatcttatccattcctggacacagtgcagaggagaagcagtctgtatggcagaaa
gcaatggatcatatagaggaacttgtatccctgaggccctgtaaagctgcagagctggtt
gctactcacttttctgaacagattgaaacagtcattaaaaaacttcagaaccaggttttg
cttttcaaatttttgaggagtcttcttgacccaagggaaggtattcatgtaaatcaagaa
ttgctgcagatgtctccctgtgttacggagcagttcattgagctgttgtgtcagttcagc
ccaaaccaggttatagagacactgcaggtccttgagtgctaccgcctggaagaaaccatc
cagattacccagaagtatcaacttcatgaagtcactgcctatctattagaaaaaaaagga
gatattcatggtgccttcttaataatgctacagagactacaaagaaaacttcaagagata
acacatcaagatgaaaaggccaaagaggagctctcattgaaggatgttgaagataccatg
gtagagacaattgccctttgccagcgaaattcacataatttgaaccagcagcaacgagag
gcactctggtttccgttgttggaggcaatgatggcccctcagaagctgtctggttcagct
gcacctcatctacaccctgacgctctgaaatctttgaccatgcaagttctaaacagcatg
gctgcatttattgccctaccatcaatcttgcaaagaatcttacaggatccagtttatgga
aaaggaaaacttggagaaatccagggacttattctgggaatgttggatacctttaactat
gaacaaacactgctggaaacaactactagccttctaaaccaagatctccattggtcattg
tgtaacctgagagcgtcagtcaccagaggactgaatcccaagcaggattactgctctata
tgtttgcagcagtacaagagacgccaagaaatggctgatgaaatcattgtctttagctgt
ggccatttgtatcactcattctgtctgcaaaacaaagagtgcaccacagagactgagggg
cagacgagatggacatgctacaaatgcagctcaagtaacaaagtagggaagttaagtgaa
aattcatctgaaattaaaacggggaagacagcccaatcccaggtaaaaatgtctccttct
tgtcatccatccaaaggagattctgctgttaagaaggcagcctcggaacccgtcctggac
ccccagcaaatccaggcgtttgatcagctttgccgtctctaccgaggaagctcccggctg
gctctcctcacagagctctcccagaatcgcagcagtgagagctacaggccattcagtggc
tcccagagtggccctgctttcaacagcatcttccagaatgagaatttccagctgcagctc
attcccccacctgtgactgaggactga
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