Odobenus rosmarus divergens (Pacific walrus): 101371573
Help
Entry
101371573 CDS
T05148
Symbol
COL5A3
Name
(RefSeq) collagen alpha-3(V) chain isoform X2
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04820
Cytoskeleton in muscle cells
oro04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
101371573 (COL5A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101371573 (COL5A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oro00536
]
101371573 (COL5A3)
Glycosaminoglycan binding proteins [BR:
oro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101371573 (COL5A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_3
Laminin_G_1
Motif
Other DBs
NCBI-GeneID:
101371573
NCBI-ProteinID:
XP_004398900
UniProt:
A0A2U3VU58
LinkDB
All DBs
Position
Unknown
AA seq
1748 aa
AA seq
DB search
MGSRRGLGQPRAGLCLLLTLLQLLLRAQAGPVDVLKALGVQGGQAGVLEGPGLCPHRAPE
GDRAFRVGKASTLGIPTWELFPDGHFPENFSMLITLRGQPANQSVLLSIYDEGGTRQLGL
ALGPALGLLGDSFSPLPQQVNLMDGRWHRVAVSVDGRRVTLVADCEPQPPTLGHGPRFIS
TAGLTVLGTQDLGEETFEGDIQELLISPDPQAAFQACERYLPGCDNLDPITTGVPQGEPE
TPPPRRKGKGKGKKKGRGRKGKGRKKKNKGTLTPSPPPGSLENQTSTDIPRTETPASTLP
PTPTTLVITTTVTTGHNVTMLEGGLDPDNGTELRTLETKLAKEDKEGGGPTMGPDFWAAE
QPSQTQFQIFPGAGEKGAKGEPAVIEQGQQFEGPPGAPGPRGVVGPSGPPGPPGFPGDPG
LPGPAGLPGIPGIDGIRGLPGTVIMMPFQFASSSLKGPPVSFQQAQAQAVLQQAQLSMKG
PPGPVGLTGRPGPVGLPGYPGQKGEMGEMGPQGPRGLQGPLGPPGREGKMGRSGADGARG
LPGDTGPKGDRGFDGLPGLPGEKGQRGDFGHVGQPGRPGEDGEKGAEGPPGPTGQAGEPG
PRGLIGPRGSPGPLGRPGVVGIDGAPGAKGNVGPPGESGPPGQQGNPGSQGLPGPQGPIG
TPGEKGPPGNPGIPGIPGSDGPPGHPGHEGPTGEKGAQGPLGSAGPPGYPGPRGVKGTSG
NRGLQGEKGEKGEDGFPGFKGDGGLKGDRGLPGPPGPRGEDGPEGLKGQEGLAGEEGPPG
SAGEKGKLGVPGLPGYPGRPGPKGSTGFPGPLGPLGEKGKRGKAGQPGLEGERGPPGSRG
ERGQPGATGQPGPKGDVGQDGAAGIPGEKGLPGLQGPPGFSGPKGPPGPQGKDGRPGHPG
QRGELGFQGQTGPPGPAGVVGPQGKTGEAGPLGERGPPGPPGPPGEQGLPGLEGREGVKG
DLGPLGPLGKEGPPGPRGFPGPQGAPGDPGPIGLKGDKGPLGPVGANGSPGERGPLGPAG
GIGLPGQSGGQGPVGPAGEKGSPGERGPPGPTGKDGIPGPLGLPGPPGSVGPPGEDGDKG
EAGPPGNKGDKGGKGDAGPPGPAGVRGPVGHPGSPGADGAQGRRGPPGLFGQKGDEGVRG
FVGLIGPPGLQGLPGPPGEKGEVGDVGSMGPHGAPGPRGTHGPSGSEGPPGLPGGVGQPG
AVGEKGEPGEAGDPGPPGTPGIPGPKGEIGEKGDSGPSGAAGPPGKKGPPGEDGAKGNVG
PTGLPGDLGPPGDPGVSGIDGSPGEKGDPGDVGGPGPPGASGEPGPPGPPGKRGPSGHMG
REGREGEKGAKGEPGPDGPPGMTGPVGARGPPGRVGPEGLRGIPGPVGEPGLLGPPGQMG
PPGPLGPSGLPGLKGDAGLKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPQGEPG
PPGPIGSLGHPGPPGVVGPLGQKGSKGSLGSFGPRGDTGPPGPPGPPGSPAELHGLRRRR
RSLPGPGALEAPEGGMEEVLASLTSLGFELEQMRRPPGTAERPGLVCSELHRNHPHLPDG
EYWIDPNQGCARDSLRVFCNFTAGGETCLYPDKKFEMVKMASWSREKPGNWYSTFRRGKK
FSYVDADGSPVSVVQMTFLKLLSATARQSFTYSCQNSAAWLDEAAGDHSRSLRFLGANGE
ELSFNQMAAATITVPYDGCRLRKGQTKTLLELSSSRVGFLPLWDVAATDFGQTNQKFGFE
LGPVCFSS
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atggggagtcgccgaggcctgggccagccgcgggccggcctctgcctgctcctgactttg
ctgcagcttctgctccgggcgcaggccggccctgtggatgtgctgaaggccctgggcgtg
caagggggccaggctggggtccttgaggggcctggcctctgcccccatagggccccagag
ggtgaccgggcattcagggttggcaaggccagcacacttggcatccccacgtgggagctc
tttccagatgggcacttccctgagaacttttccatgctgatcactctgcggggccagcca
gccaaccagtctgtccttctgtccatttatgatgagggtggtactcggcagctgggcctg
gctctggggccagctctgggcctcctaggtgactccttcagccccctcccccagcaagtc
aacctcatggatggcaggtggcaccgtgtggcagtcagtgtggatggcaggagggtgact
ctggtggctgactgtgagcctcagcctcccacgctgggccatgggcctcgattcattagc
acagctggactcactgtgttggggacccaggacctcggggaggagacttttgagggagat
attcaggagttgctgataagcccagatcctcaggctgccttccaggcctgtgagcgatac
cttcccggctgtgacaacctggaccctataaccacaggggtgccccagggtgagccagaa
actcctccccctcgacggaaggggaagggaaaagggaagaaaaaagggcgaggtcgtaag
gggaagggcaggaagaagaagaacaagggaactttgaccccaagcccacctcctggctcc
ctggagaaccagacctccaccgacatccccagaacagagacaccagcttcaactctgcct
ccgactcccacaactttggtcattaccaccactgtgaccactggccacaatgtcaccatg
ctagaggggggcctggacccagacaatggaactgaactaaggaccctggagactaagtta
gccaaagaggacaaagaaggaggtggccccaccatgggccctgacttctgggcagcagaa
cagccatcgcagactcagttccagatctttcctggtgctggagagaagggagcaaaagga
gaaccagcagtgattgaacagggacagcagtttgagggacctccaggagccccaggacct
cgaggggtggttggcccctcaggccctcctggccccccaggattccctggagaccctggt
ctaccgggtcctgctggcctcccaggaatccctggcatcgatgggatccggggtctacca
ggcactgtgatcatgatgccgttccagtttgcaagcagctccctcaaaggacccccagtc
tccttccagcaagcccaggctcaggcagtactgcaacaggctcagctgtctatgaaaggt
ccccctggcccagtagggctcactgggcgcccaggccctgtgggtctccctgggtatccg
ggtcagaaaggagagatgggagaaatggggccacagggtccccgaggccttcagggacct
cttgggcccccgggccgggagggaaagatgggccgctctggagcagatggggctcggggc
ctcccaggagacacaggacctaagggcgatcggggttttgatggcttgccagggctacct
ggagagaaagggcaaaggggtgattttggccatgtggggcaacctggtcgcccaggagag
gatggtgagaagggagccgaaggacctccggggcccactggccaggctggggagccaggc
ccccgaggactgataggccctagaggctcccctggtcccctgggacggccgggtgtagtt
ggaattgatggtgctccaggagccaaaggaaatgtgggtcctccaggagaatcaggccct
ccaggacagcaaggaaatcccgggtcccagggactccctggccctcagggacccattggc
actcctggggagaagggtccccctggaaacccaggaattccaggcattccaggatctgat
ggccctccgggtcacccaggccatgagggccccacgggagagaaaggggcccagggtcca
ctagggtcagcaggacccccgggctatcctggacctcggggtgtgaagggtacctctggc
aaccgcggtctccagggggagaaaggagagaagggagaggatggcttcccaggcttcaag
ggcgatggggggctcaaaggagatcgggggctccccggcccccctggcccccggggagag
gatggtccggaagggctgaaggggcaggaggggctggctggcgaggagggtcccccaggc
tcagctggggagaagggcaagcttggggtgccaggtctcccgggttacccaggacgtcca
ggccctaaggggtctactggctttcccgggcccctggggccattaggagaaaaagggaag
cgggggaaggcggggcagccaggcctggaaggagagcggggaccaccaggctcccgcggg
gagagggggcagcctggtgccaccgggcaaccaggccccaagggcgatgtgggccaggat
ggggccgctgggatccctggagaaaagggcctcccaggtctgcaaggccctcctggattt
tctgggccaaagggtccccctggtccccaggggaaagatggacgtcctgggcaccctggt
cagagaggagaattgggcttccaaggtcagacaggcccacctggaccagctggtgtcgtg
ggtccccagggaaagacaggagaagctggacctctgggtgagaggggccccccaggccct
cctgggcctcccggtgaacaaggtcttccgggcctggaaggcagagagggtgtcaagggg
gacctgggaccactgggaccccttgggaaggaaggaccacctggacccaggggcttcccc
ggcccccaaggagcccctggggacccaggacctattggtttaaagggtgacaaaggcccc
ctgggccctgttggagccaacggctcccctggggagcgggggccactgggcccagcagga
ggcattgggcttcctggccaaagcggaggccaaggccctgttggccctgcaggcgagaag
gggtctccgggtgaacgtggcccccctggacccacaggcaaagatgggatcccggggccc
ctggggcttcccggaccccctggatctgttgggccgcctggcgaggatggggacaagggg
gaagcgggcccccctggaaacaaaggggacaaaggcggcaaaggggatgcgggcccacct
ggaccagcaggagtacggggtcccgtgggacacccaggctccccgggagcagatggggct
cagggacgccggggaccgccgggcctctttgggcagaaaggagatgaaggagtgagaggc
ttcgtggggctgattggcccccctggcctgcaggggttgccaggtcctcctggagagaaa
ggggaggtcggagacgtagggtccatgggtccccacggagctccagggcctaggggtacc
cacggccccagtggatcagagggccctccagggctgcctgggggagttggtcagccgggc
gctgtgggcgagaagggtgagccaggggaggctggagacccaggacccccagggacccca
ggcatccctgggcccaagggagaaattggtgaaaagggggactcaggcccatctggggct
gctggacctccaggcaagaaaggcccccctggagaggatggagccaaagggaacgtgggc
cccactgggctcccaggagatctaggaccccccggagaccctggagtttcgggtatcgat
ggctccccaggagagaagggagaccctggtgatgttgggggaccgggtccacctggggct
tctggggaacctggcccccctgggcctccaggcaagaggggtccttcaggccacatgggt
cgagaaggcagagaaggggagaaaggggccaagggggagccaggtcctgatggaccccca
gggatgacaggcccagtgggggctcgagggccccctggacgtgtggggcctgagggtctt
cgagggatccctggccctgtgggtgaaccaggcctcctgggacctcctgggcagatgggc
cctcctggacccctggggccctctggccttccaggattgaagggggatgctggcctcaag
ggggaaaagggccacattggattaattggccttatcggcccccctggggaagctggtgag
aaaggggatcaggggttgccaggcgtgcagggcccccctggcccccagggagaacctggt
ccccccggtcccattggctctctgggccaccctgggcccccaggcgtggtgggtcctctg
ggacagaaaggctccaaggggtccctgggatcctttggtccccgtggcgatactggcccc
ccgggaccccccggccccccgggttccccagctgagctgcatgggctgcgccggcgccgg
cgctctctcccaggcccaggggcgctagaggccccggagggcggcatggaggaggtgctg
gcctcactcacttcgctgggctttgagctggagcagatgcggcgccctccgggcacggct
gagcgcccgggcctcgtgtgcagtgagctgcaccgcaaccacccacacctgcctgatggg
gaatactggattgaccccaaccagggctgtgcgagggactcgctcagggttttctgcaac
ttcacggccggaggagagacctgcctctatcccgacaagaagtttgagatggtaaaaatg
gcctcctggtccagggaaaagccgggaaactggtatagcacattccgtcgagggaagaag
ttctcctacgtggacgctgatgggtccccggtgagtgtggtccagatgaccttcctaaag
ttgctgagcgccacggcccgccagagcttcacctactcctgccagaactctgccgcctgg
ctggacgaagctgcaggggaccacagccgctccctccgcttcctgggagccaacggggag
gagctgtctttcaaccagatggcagcagccaccatcactgtcccctatgatggctgccgg
ctccggaagggacagacgaagaccctcttggagttgagctcttcccgagtgggctttctg
cctctgtgggatgtggcggctactgactttggccagacgaaccagaagtttgggtttgaa
ctaggccctgtctgttttagcagctga
DBGET
integrated database retrieval system
