Odobenus rosmarus divergens (Pacific walrus): 101372440
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Entry
101372440 CDS
T05148
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oro03009
]
101372440 (IGHMBP2)
03012 Translation factors [BR:
oro03012
]
101372440 (IGHMBP2)
Enzymes [BR:
oro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101372440 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
101372440 (IGHMBP2)
Ribosome biogenesis [BR:
oro03009
]
Eukaryotic type
Other ribosome biogenesis factors
101372440 (IGHMBP2)
Translation factors [BR:
oro03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
101372440 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
zf-AN1
Viral_helicase1
ResIII
DEAD
nSTAND3
AAA_16
IstB_IS21
AAA_22
SLFN-g3_helicase
Helicase_RecD
UvrD-helicase
AAA_25
Flavi_DEAD
AAA
DnaB_C
PhoH
Zot
ABC_tran
UvrD_C_2
NPHP3_N
NTPase_1
ATPase
Motif
Other DBs
NCBI-GeneID:
101372440
NCBI-ProteinID:
XP_004393861
UniProt:
A0A2U3VGH2
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MASATVESFVTRQLDLLELERDAEVEERRSWQENISPKELQSRGVCLLKLQVSSQRTGLY
GRLLVTFEPRRCASPAVLPSNSFTSGDIVGLCDEGSQLATGILTRITQRSVTVAFDESHD
FQLSLDREQAYRLLKLANDVTYKRLKKALITLKKYHSGPAFSLIEVLFGRAAPSPASEIQ
LPPFYNTSLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVRQGLKVLCCAP
SNIAVDNLVERLAQCKQRILRLGHPARLLESTQQHSLDAVLARSDSAQVVADIRKDIDQA
LAKNRQTQGKREKSSVWSEIKLLRKELEEREEAAMLESLTSAAVVLATNAGASSDGPLKL
LPDGHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTTVSHKAALAGLSLSLM
ERLVEEHGARVVRTLTVQYRMHQAIMQWASDALYHGQLTAHPSVAGHLLRDLPGVAATEE
TSIPLLLVDTAGCGLFELEEENDQSKGNPGEVRLVSLHIQALVDAGVQASDIAIITPYNL
QVDLLRQSLAHRHPELEIKSVDGFQGREKEAVVLSFVRSNRKGEVGFLAEDRRINVAVTR
ARRHVAVVCDSHTVSSHTFLKTLVDHFAEHGEVRTAFEYLDDIIPENYSHESSQGHGRAG
TKPHGSAALARKPPGGRPREGAQEARAAEGLERRRPGGKPSGPEVPSQPRLNGGSPEGAG
SGDRAERFRAKIAEFVASEKTQLEFPASLNSHDRMWIHQIAEEHGLRHDSTGEGKNRFIT
VSKRAPPAPPALQPPAGAGSQAPVRPTAPGPTQTKPPLGEQGIQDPLNLKALHLERLQRE
KSRRERPAKEGPAKERPTKEGQQALRSGPRALPEKKKKEAKGHAAVDLPGEEDFEALVAA
AIKADNACGLAKCTASVVTVGQLCLHCGRRYCLSHHLPEIHGCGERARAHARQRISREGV
LYAGSGTKDRTLDPAKRAQLQRRLDKKLDELTSQRKSKRKEKK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcgactgtggagagcttcgtgaccaggcagttggacctgctggagctcgag
agagacgcggaggtcgaggagcgcaggtcttggcaggaaaacatctctccgaaagaactg
cagagccgaggcgtgtgtttgctgaagctgcaggtgtccagccagaggactgggctgtat
gggcggctgctggtcacctttgagcccaggagatgtgcgtctcccgcggtgcttcccagc
aacagctttacttcgggcgatatagtgggtctgtgtgacgaagggagtcagctggccacg
gggatcctgacccggatcacgcagagatcggtcacggtggcctttgacgagtcccatgac
ttccagctgagcttggaccgggagcaggcctacagactgttaaaacttgccaatgatgtc
acttacaagcgactgaagaaggctctgatcaccctaaagaagtaccattctggccccgcc
ttctcactcatagaggtcctctttggtagagcagcccccagtcctgccagtgagatacag
ctgccgccattctataacacttccctggatgcctcccagaaggaagcggtctccttcgca
ctgtcccagaaagagcttgccatcatccatgggcctcctggcaccgggaagaccaccacc
gtggttgagatcattctgcaggctgtgaggcagggcttaaaggttctgtgctgtgctccc
tctaacatcgctgtggataatctggtagagcgtctggctcagtgtaagcagagaatcctg
cgcctcgggcaccccgcccgcctgctggagtccactcagcagcattccctcgacgcagtg
ttagcgcggagtgacagcgcccaggttgttgcagacatcaggaaggacatcgaccaggcc
ctcgcgaagaacaggcagacccagggtaagagagagaagagtagtgtttggagtgaaatc
aagctgttgaggaaggagctggaggagagggaagaagctgcgatgctggagagcctcacg
tcagcagccgtggtgctggcgacaaacgcaggtgcttcttccgacggccctctgaagctg
ctgcccgatggccacttcgacgtggtggtcatcgacgagtgcgcccaggccctggaagcc
agctgctggatccccctgctgaaggccaggaagtgcatcctggctggagatcacaagcag
ctgccccccaccacggtctctcacaaggctgccctggcggggctgtcgctgagcctgatg
gagcgcctggtggaggagcacggtgcgcgggtggtgcggacgctgactgtgcagtaccgc
atgcaccaggccatcatgcagtgggcctcagacgccctgtaccatgggcagctcacggcc
cacccttctgtggctgggcacctcctgcgggacctcccaggagtggctgccacggaggag
accagcatccccctgctgctcgtggacacggccggctgtgggctatttgaactggaagag
gagaacgaccagtctaaggggaaccctggtgaagtgcgcctcgtcagtctgcacatccag
gccctggtggacgctggtgtccaagcgagtgacattgccatcatcacgccatacaacctc
caggtggacctgctcaggcagagccttgcccacaggcaccccgagcttgaaattaagtcc
gtcgatggcttccaaggccgagagaaggaggctgtggtcctgtccttcgtcagatccaat
aggaaaggtgaagtgggcttccttgccgaggaccggcggatcaatgttgctgtcacccgc
gcgcggcgccacgtggcggtcgtatgtgattctcacaccgttagcagccacaccttcttg
aagaccctggtggatcacttcgcggagcacggggaagtgcgcacggcctttgaatatctt
gacgacatcatccctgaaaactactcccatgagagttcccagggccacggccgagctggc
acgaagccccacggctctgcggcgttggccaggaagcctcctgggggccggccgcgggag
ggggcccaggaggccagagcagctgaggggctggagcggaggaggccgggtgggaagccc
tcaggccctgaggtcccttctcagcccaggctcaatggaggcagcccagagggagccggg
agcggagaccgtgcagaacgcttcagggccaagatcgctgagtttgtggcgagtgagaaa
actcagttggagtttcctgcttccctgaactcccacgacagaatgtggatccaccagata
gccgaagagcacgggctgaggcatgacagcaccggggaagggaagaacaggttcatcact
gtgagcaagagagccccgcccgccccgccagccctgcagcctccagcaggggccggcagc
caagcccctgtcaggcccacggcccccggccccacacagaccaagccccctcttggggag
cagggcattcaggaccccctgaatctgaaggccctgcacctggaaaggctgcagagggag
aagagcaggcgggagcggccggccaaggaggggccggccaaggagcggccaaccaaggag
gggcagcaggccttgcgctccgggccgcgcgcgttaccagagaagaagaagaaagaagca
aaaggacacgcggctgtagatttgcccggtgaggaggacttcgaggccctggtcgcggcc
gccatcaaggctgataacgcgtgcggcctcgctaagtgcacggccagcgtcgtgaccgtg
ggccagctctgtctgcactgcggccgccgctactgcctcagccaccacctgcccgagatc
catggctgtggggagagggctcgtgcccacgcccggcagagaatcagccgggaaggagtc
ctctacgccggcagtgggaccaaggacaggaccctggacccagccaagagggcccagctc
cagaggaggctggataagaagctggatgagctgaccagccagaggaagagtaaacggaag
gagaagaagtga
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