Odobenus rosmarus divergens (Pacific walrus): 101373198
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Entry
101373198 CDS
T05148
Symbol
CIRH1A
Name
(RefSeq) cirhin isoform X2
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101373198 (CIRH1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oro03009
]
101373198 (CIRH1A)
Ribosome biogenesis [BR:
oro03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101373198 (CIRH1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
PQQ_2
CPSF_A
Motif
Other DBs
NCBI-GeneID:
101373198
NCBI-ProteinID:
XP_004393387
UniProt:
A0A2U3VF91
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MGEFKVHRVRFFNYVPSGIRCVAYNNQSNRLAVSRTDGTVEIYNLSANYFQEKFFPGHES
RATEALCWAKGQRLFSAGLNGEIIEYDLQALNIKYAVDAFGGPIWSMAISPHGSQLLVGC
EDGSLKLFQITLDKIQFERNFDRQKSRILSLSWHPSGTHVAAGSIDYISVFDVKSGSAVH
KMLVDRQYMSVSKRKCIIWGVAFLSDGTVISVDSAGKVQFWDSATGTLVKNHLIANADVQ
SIAVSDVSMVPQEDSFVVGTAEGTVFHFQLVSVTSNSSEKQWVRTKPFQHHTHDVRAVAH
SPTALISGGTDTHLVIRPLMEKVEVKNYDAALRKITFPHRRLISCSKKRQLLLFQFAHHL
ELWRLGSTVATGKNGDTLPLSKDADHLLHLKTKGPENIICSCISPCGSWIAYSTTSRFFL
YRLNYEHDNISLQRVSKMPAFLRSALQILFSEDSTKLFVASNQGSLHVIRLLEGSFKHLH
TFQPQSGTVESMCLLAVSPDGNWLAASGTSAGVHVYNIKHLKLHCTVPSYNFPVTALAIA
PNTNNLVIAHSDQQVFEYSIPDKQYTEWSRTIQKQGFHYLWLQRDTPITHISFHPKRPMH
ILLHDAYMFCIIDKSLPLPNDKTLLYNPLPPTNESDVIRRRTAHAFKISKIYKPLLFMDL
LDERTLVAVERPLDDIIAQLPPPIKKKKFGT
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaatttaaggtccatcgagtacgtttctttaattatgttccatcagggatccgc
tgcgtggcttacaataaccagtcaaacagattggctgtttctcgaacagatggcactgtg
gaaatttataacttgtcagcaaactactttcaggaaaaattttttccaggtcatgaatct
cgggctacagaagctctgtgttgggcaaaaggacagcgactctttagtgctggactcaat
ggagaaattatcgagtatgatttgcaggcattaaacatcaagtatgccgtggatgccttt
ggaggacccatttggagcatggctatcagtccccatggttctcagcttttggttggctgt
gaagatggatccctgaagctatttcaaatcaccctagacaaaatccagtttgaaagaaat
tttgatcggcagaaaagtcgcatcctgagtctcagctggcatccctctggtacccacgtt
gcagctggctccatagactacatcagtgtgtttgatgtcaaatcagggagcgctgttcat
aagatgctggtggataggcagtatatgagtgtgtctaagcggaagtgtatcatatggggc
gtggccttcttgtctgatggcactgtcataagtgtggactctgctgggaaggtgcagttc
tgggactcagcgactgggacgcttgtgaagaaccatctcattgccaatgctgatgtgcag
tccattgcggtatctgatgtgagtatggtccctcaagaagacagtttcgtggtgggcaca
gccgaggggacagtattccattttcagctggtctctgtgacttccaacagcagtgagaag
cagtgggtgcggacaaagccattccagcatcatacacatgacgttcgagccgtggcgcac
agcccgacagcactgatatctggaggcactgacacccatttagttatccgacctctcatg
gagaaggtggaggttaagaattacgatgctgctctccgaaaaatcacttttccccatcga
cgtctcatttcctgttcaaaaaagaggcagcttctccttttccagtttgctcatcacttg
gaactttggcgactgggatctacagttgcaacaggaaagaatggggatacccttccactt
tctaaagatgcagatcatttgctgcaccttaagacaaagggtcctgagaacattatttgc
agctgtatctccccttgtggaagttggatagcctattctacaacttctcggtttttcctt
tatcggttgaattatgaacatgacaacataagcctccaaagggtttccaaaatgccagcg
ttccttcgctctgctcttcagattttgttttctgaagattcaacaaaactctttgtggca
tcaaatcaagggtctctacatgtcattcggctattggaaggaagtttcaagcacctgcat
actttccagcctcagtcagggacagtggagtccatgtgtcttttggcagtcagtccggat
gggaattggctagctgcatcaggtaccagtgctggagtccatgtgtacaacataaaacat
ctaaagcttcactgcaccgtaccttcctataatttccctgtgactgctctagccattgcc
cccaataccaacaaccttgtcattgctcattctgaccagcaggtatttgagtacagtatc
ccggacaaacagtatacagagtggagccggaccatccaaaagcagggctttcattacctt
tggctccagagagatactcccatcacacacatcagttttcatcccaagagaccaatgcac
atccttctccatgatgcctacatgttctgcatcatcgacaagtcgttgcctcttccaaat
gacaaaaccttactctacaatccacttcctcccacgaacgaatcagatgttatcaggagg
cgtaccgcccatgcctttaaaatttctaagatatataagcctctgctcttcatggatctt
ttggatgaaagaacactggttgctgtagaacggcccctggatgacatcatcgctcagctt
ccaccacccatcaaaaagaagaaatttgggacctaa
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