Odobenus rosmarus divergens (Pacific walrus): 101373882
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Entry
101373882 CDS
T05148
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain
KO
K06237
collagen type IV alpha
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04151
PI3K-Akt signaling pathway
oro04382
Cornified envelope formation
oro04510
Focal adhesion
oro04512
ECM-receptor interaction
oro04820
Cytoskeleton in muscle cells
oro04926
Relaxin signaling pathway
oro04933
AGE-RAGE signaling pathway in diabetic complications
oro04974
Protein digestion and absorption
oro05146
Amoebiasis
oro05165
Human papillomavirus infection
oro05200
Pathways in cancer
oro05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101373882 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101373882 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101373882 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101373882 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101373882 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
101373882 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
101373882 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101373882 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
101373882 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101373882 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
101373882 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101373882 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oro04147
]
101373882 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
oro00536
]
101373882 (COL4A6)
Exosome [BR:
oro04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101373882 (COL4A6)
Glycosaminoglycan binding proteins [BR:
oro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101373882 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101373882
NCBI-ProteinID:
XP_012422817
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
GEKKSYGKPCGGQDCSGGWKCFPEKGARGRPGPVGIQGPTGPQGSAGPSGLAGLRGERGS
PGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPPGPDGCNGTQGAVGYPGPDGY
PGLLGPPGLPGQKGFKGEPVLTQGTFKGMKGEPGLPGLDGITGPPGAPGSPGAVGLMGPP
GLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAGPPPSTGELEFMGFPKGKKGSK
GEPGLPGFPGISGPPGLPGFGTAGEKGEKGIPGLPGPRGPMGLEGRQGPPGSQGKKGSSG
FPGLNGFPGIKGEKGGIGLPGPDVFIDTDGAVISGYPGDPGMPGLPGLKGDEGIQGLPGP
SGIPGLLALPGVPGALGPQGVPGLKGDQGNPGRTTVGTAGPPGRDGLPGLPGLLGPPGPA
FETGTLQNAEPGFPGLRGERGPKGNPGIKGMKGDSGFCACDGGVPNTGPPGEPGLPGPPG
LIGLPGLKGTRGDPGSGGAQGPSGTPGLFGPPGPAGPKGEKGEPTLSSGSGVPGEQGDPG
PQGLPGETGAPGKEGIPGLPGLPGLPGDGGQGFPGEKGLPGLPGEKGHSGPTGPPGIGLP
GSPGPRGLPGDQGIDGLPGQQGLPGLPGDCCCRESVGKGHLVTEGGITLPCIIPGSYGPS
GLPGAPGFPGPKGARGLPGTPGQPGLRGNKGEPGSPGLVQLPELPGFPGPRGEKGLPGFP
GFPGKDGLPGELGSPGLPGSKGAPGDIFGAEDGAPGEQGLQGLPGDRGFPGDSGLPGPKG
LLGKSGLLGPKGERGSPGTPGHVGQPGPPGPDGLFGVKGKPGLPGAPGFPGPSGHPGKKG
VRGETGPPSSAGKRGLPGLKGLPGSPGLVGFLGSSGLPGNTGLPGLPGLKGEKGSVGLAG
FPGMPGLPGIPGASGLKGISGSAGRVGPSGRVGSVGEKGDRGDPGPAGIPSPRPPTLNIR
FKGDKGSRGSAGSTGFPGPRGDKGEVGPPGPPGLPGAPGFPSTIKGLIGRAGLPGSAGQR
GLPGLKGSPGITGFPGIPGESGSKGLNGTPGLPGTSGLPGSKGDQGQTIGISGSPGPKGQ
PGESGFKGEKGTDGFVGDVGFPGSKGEDGNVGISGDVGLPGSPGLPGIAGMRGNPGFPGS
PGHPGSTGPLGPSGLMGTKGFPGLPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLPGPK
GERGSPGTGLSTPGKPGVKGQKGGRGFPGLQGPAGLPGAPGLSLPSVIVGQPGDPGRPGL
DGERGRPGSPGPPGPPGPSSDQGDPGDPGFPGVPGPQGSKGDQGIPGFSGLPGELGLKGV
RGEPGFMGIPGKVGPPGDPGLPGMKGKAGPRGFSGPRGAPGQTPIAEAVQVPPGPMGLPG
IDGIPGLTGDPGVQGPVGLQGSKGFPGIPGKNGLNGLPGPPGALGDPGLPGLQGPPGFEG
APGKKGPFGRGGVPGQSVRVGYTLVKHSQSEQVPLCPVGTSRLWVGYSLLFVEGQEKAHN
QDLGFAGSCLPRFSTMPFIYCNVDEVCHYAGRNDKSYWLSTTAPIPMMPVGQAQIPQYIS
RCSVCEAPSQAIAVHSQDVTIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQALVSPGSCLE
DFRATPFIECSGARGTCHYFANKYSFWLTAVEERQQFREEPVSETLKAGRLHTRVSRCQV
CMKSL
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
ggagagaagaagtcctatggaaagccatgtgggggccaagactgcagtgggggctggaaa
tgctttcctgagaaaggcgcaagagggcgaccgggaccagtcggaattcaaggtccaaca
ggtccacagggatctgccggccctagtggtttagcagggttgagaggagagagaggctcc
ccaggccctctgggaccatacggaccaaaaggagataagggtcccatgggagttcctggc
tttctcggcatcaatgggattccgggccaccccggacagccagggcccaggggcccacct
ggcccggatggctgtaatggcactcaaggagctgttggatatccgggccctgatggctat
cctgggcttctcggaccacccgggcttcctggtcagaaaggctttaaaggtgaacctgtc
ctcacccaaggtactttcaaaggaatgaagggggagcctgggctgcctggactggatgga
ataactggcccaccaggagcacccgggtccccaggagctgtaggactcatggggccacca
ggattgcaaggtcctccaggcccccccggcttccctggtcctgatgggaatatggggtta
ggtttccaaggagagaaaggagtcaagggagatgttggcctcccaggccctgcaggaccc
ccaccatctaccggggaactggaatttatgggatttcccaaagggaagaaaggatccaag
ggtgaaccagggcttccgggtttcccaggaataagtggccctccaggtctcccgggattt
ggaactgctggagaaaagggagaaaagggaatccctggtttgccaggacctaggggtcca
atgggtttagaaggacgccaaggccctccagggagtcagggcaagaaggggtcctcaggt
ttccctgggcttaatggattcccaggaattaagggtgaaaagggtggcattggcctgcca
ggcccagatgttttcatcgatacagatggtgctgtgatctcaggttatcctggagacccc
gggatgccaggcctcccaggacttaaaggagacgaaggtatccagggcctgcctggccct
tctggcatccccggcttactggctttaccaggtgtcccaggtgcgctagggccccaagga
gttccaggtctgaagggggaccaaggaaacccaggccgcaccacagttgggacagctggt
ccccctggcagagacggtttgccaggcctgcccggcctactgggcccacccggtccagca
tttgagactggaaccctccagaacgcagagccaggcttccctggtctccgaggagaacga
ggtccaaaaggaaacccaggcatcaaaggaatgaaaggggactcgggcttttgtgcctgt
gacggtggtgtcccaaacaccggaccacctggggagccaggcctgcctgggccacctggc
ctcataggccttccaggccttaaaggaaccagaggagatccaggctctgggggtgcacag
ggcccatcagggactccaggtttatttgggcctcctggtcctgcgggccccaaaggagag
aaaggggaaccaactctcagttcaggatcaggggtgccgggggagcagggtgatcctggc
ccccaggggctccctggggagaccggagccccaggcaaggaaggaataccaggtttgcca
ggtctgccaggcctcccgggtgacggtggacagggcttcccaggtgaaaaggggttacca
ggacttcctggtgaaaagggccacagtggtccaaccggccccccaggaattgggctgccg
ggctctcctggacctcgtgggcttcctggagatcaaggaattgatggattaccagggcaa
caaggcctccctgggcttcccggtgattgctgctgcagggagagcgttggtaaaggacac
ttagtcacagagggaggcatcaccttgccatgtataattcctgggtcctatggtccatca
ggcttaccaggagctcccggattcccaggccctaaaggggcccgcggcctccctgggacc
ccaggccagcctggactgcgtggaaataaaggagagcctggaagtccaggattggttcaa
cttcctgaattgccaggatttcctggacctcgtggggagaagggcttgcctgggtttcct
gggttccctgggaaagatggcttgcccggggaacttggcagtccaggtttacccggttcc
aagggagcccctggtgacatctttggtgctgaggatggtgctccgggggagcaaggcctg
cagggattgccaggggacagaggatttcctggagactctggccttccgggacccaagggt
ttgcttgggaagtcgggcctgctaggccccaaaggtgaacggggcagccccggcacaccg
ggccacgtgggacagccagggccccctgggcctgatggtctatttggcgtcaagggcaaa
cccgggctcccgggtgcaccaggctttccgggcccttcaggacatcctggaaagaaaggt
gtaagaggcgagacaggtcccccttcatcagctggaaagagaggcctgccggggctgaaa
ggccttccgggatctccagggctggttggcttcttggggagctcaggcttgccagggaac
actgggttgccaggcctgccaggtctgaagggtgagaaggggtctgttgggctggctggt
ttcccggggatgcctggtctcccaggtattcctggcgcaagtggattaaagggcatttct
gggtcagccggaagagtgggaccatctggacgggtcggtagtgtgggtgaaaaaggagac
agaggcgacccagggccagctggaatacccagcccaagacctcccacactgaacattcgg
ttcaaaggagacaaaggctcgagaggctcagctggatccaccggatttcctgggcccaga
ggtgacaaaggagaggttggccccccggggccaccaggattgcctggagctcccggcttc
cccagtaccatcaagggactcattgggagagcaggtctccctggctccgcaggacaacgg
ggcttacctggcctgaaggggtcccctggaatcacaggtttcccaggaataccaggggaa
agcggttcaaagggtctcaatggaactcccggactcccaggaacatctggtctcccaggt
tcaaaaggagatcaaggtcagacaattggaatttccggtagcccaggacccaagggacaa
cctggggagtccggttttaaaggcgagaaaggaacagatggattcgttggtgatgtgggt
ttcccaggaagcaaaggtgaagatgggaatgttggtatttctggagatgttggccttccc
ggctccccaggactccccgggattgcaggcatgagaggaaatccagggtttccgggttct
ccaggccatccagggtcaactgggcccctgggaccctctggcctaatgggaaccaaaggt
ttccctggacttcctggtttacatggactgaatgggcttccaggaaccaagggaacccat
ggaactccaggacctagtataaccggcgtgcctgggccagccggcctgcctggtcccaaa
ggggaaagaggttctccaggaactggcctcagtaccccagggaagccaggcgtgaaagga
caaaaaggtggccgaggtttcccaggtctccagggccctgctggtctgcccggtgcccca
ggcctctccttgccctcagtcatagtgggacagcctggcgaccctgggcgaccaggccta
gatggagagcgaggccgcccaggctccccggggcccccggggccccctgggccgtcctcc
gatcaaggtgaccctggagaccccggcttccctggagttcctggccctcaagggtccaag
ggagaccaaggaattccaggtttctccggcctccctggagagctaggactgaaaggcgtg
agaggcgagcctggcttcatggggattccaggcaaggttgggccacccggagacccagga
cttcccggaatgaaggggaaggcagggcccagaggcttttctggaccccgaggtgctcct
ggacaaacaccaattgcagaagctgtccaggttcctcctggacccatgggtctaccaggc
attgatggcatccctggtcttacaggagaccctggggttcaaggccctgtcggcctccaa
ggctccaaaggtttccctggcatccctggcaaaaatggtctcaacggactccccggcccg
cctggggctcttggtgaccctggtctccccggactgcaaggccctccaggatttgaaggc
gccccagggaagaagggccccttcgggaggggtggagtgcccgggcagagcgtgagagtg
gggtacacgttggtgaagcacagccagtcggaacaggtgcccctgtgccccgtcgggacg
agccggctgtgggtgggctacagcttgctgttcgtggaggggcaggagaaagcccacaac
caggacctgggctttgctggctcctgcctgccccgcttcagcaccatgcccttcatctac
tgcaacgtcgacgaggtgtgccactacgccgggcgcaacgataaatcctactggctctcc
accactgcccccattcccatgatgcccgtcggccaggcccagatcccccagtacatcagc
cgctgttctgtgtgcgaggcgccctcgcaggccatcgccgtgcacagccaggacgtcacc
atcccgcagtgccccctgggctggcgcagcctctggatcggatactccttcctcatgcac
actgcggcgggcgccgagggcggcggccaggccctggtctccccgggctcctgcctggag
gatttccgagccactcctttcatcgagtgcagtggggcccggggcacctgccactacttt
gccaacaagtacagtttctggctgacggcggtggaagagaggcagcagtttagggaggaa
ccggtatcggaaacgctcaaggccgggcggctccacacccgggtcagccgctgccaggtg
tgtatgaaaagcctgtag
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