Odobenus rosmarus divergens (Pacific walrus): 101373888
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Entry
101373888 CDS
T05148
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101373888 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oro03019
]
101373888 (FIP1L1)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101373888 (FIP1L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
101373888
NCBI-ProteinID:
XP_004396331
UniProt:
A0A2U3VN13
LinkDB
All DBs
Position
Unknown
AA seq
594 aa
AA seq
DB search
MSAGEVERLVSELSGGTGGDEEEEWLYGGPWDVHVHSDLAKDLDENEVERPEEENASANP
PSGIEDETAENGVPKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNL
NIKTGGRVYGTTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGF
NEDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDGRFNLFKVQQGR
TGNSEKEAALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKANSSVGKWQDRYG
RAESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSERSATEVDNNFSKPPPFF
PPGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRS
ARAFPYGNVAFPHLPGSAPSWPSLVDTSKQWDYYSRREKDRDRDRDRDRERDRDRDRERE
RTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRERRHREKEETR
HKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtcgagcgcctagtgtcggagctgagcggcgggaccggaggggat
gaggaggaagagtggctctatggcggcccatgggacgtgcatgtgcacagtgatttggca
aaggacctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcct
ccatctggaattgaagatgaaactgctgaaaacggcgtacctaaaccgaaagtgaccgag
actgaagatgatagtgatagtgacagtgatgatgatgaggatgatgttcatgtcactata
ggagacattaaaacgggagcaccacagtatgggagttatggtacagcacctgtaaatctt
aacatcaaaacagggggaagagtttatggaactacaggaacaaaagtcaaaggggtggac
cttgatgcacctggaagcattaatggagttccactcttggaggtagatttggattctttt
gaagataaaccatggcgtaaacctggtgctgatctttctgattattttaattatgggttt
aatgaagatacctggaaagcttactgtgaaaaacaaaagaggatacgaatgggacttgaa
gttataccagttacctctactacaaataaaatcacggccgaagactgtactatggaagtt
acaccaggtgcagagatccaagatggcagattcaatctttttaaggtacagcagggaaga
actggaaattcagagaaggaagcagctcttccatctacaaaagctgagtttacttctcct
ccttctttgttcaagactggactcccaccaagcagaaacagcacctcttctcagtctcag
acaagtactgcctccagaaaagccaattccagcgttgggaagtggcaggaccggtatggg
agggccgaatcacctgacctaaggagattacctggggcaattgatgttattggtcagact
ataacaattagccgagttgaaggaaggcgacgggcaaatgaaaacagcaacatacaggtc
ctttctgaaagatctgctactgaagtagacaacaattttagcaaaccacctccatttttc
cccccaggagctcctcccacccaccttccacctcctccatttcttccacctcctccaact
gtcagcactgctccacctctgattccaccaccaggttttcctcctccaccaggcgctcca
cctccatctcttataccaacaatagaaagtggacattcctctggttatgatagtcgttct
gcacgtgcttttccatatggcaatgttgcctttccccaccttcctggttctgctccttcg
tggcctagtctggtggataccagcaagcagtgggactattattcaagaagagagaaagat
cgagacagagacagagacagagaccgggaacgagatcgtgatcgggacagagaaagagaa
cgtaccagagagagagagcgggagcgcgatcacagtcctacaccaagtgtttttaacagt
gacgaagaacgatacagatacagggagtatgcagaaaggggctacgagcgccacagagcg
agtcgggagaaagaagaacggcaccgagaacgacgccacagggagaaagaggaaaccaga
cacaagtcatctcgaagtaatagtagacgtcgccacgaaagtgaagaaggagacagtcac
aggagacacaagcacaaaaaatctaagagaagcaaagaaggaaaagaagctggcagtgag
cctgcccctgaacaggagagcaccgaagctgcacctgcggaatag
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