Odobenus rosmarus divergens (Pacific walrus): 101374037
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Entry
101374037 CDS
T05148
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101374037 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oro03019
]
101374037 (PATL1)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101374037 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
101374037 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
101374037
NCBI-ProteinID:
XP_004409363
UniProt:
A0A2U3WKF9
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKL
PVAVNEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRPVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQMAVPSFNQQILCPKPVHVRPPMPPRYPAPYGDRVSPNQLCSV
ANSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLPPGRMSPSQFARVPGFVGSPLAAMNPKL
LQGRVGQVLPPAPGFRAFFSAAPPAAPPPPPQHSPGPGPHLQNLRSQAPMFRPDTTHLHP
QHRRLLHQRQQQNRNQHRSLNGAGDRGSHRSSQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEVQGEGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLSLEEERPALADERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLPSVTVTSLLQQLM
NLPQSTAAPAPSNPHLTAVLQNKFGLSLLLVVLSRGEDLQSSDPATESTQNNQWTEVMFM
ATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttagaggattgtcctctggatgaagatgaagatgcatttcag
ggcttgggagaagaagatgaagagattgatcaattcaatgatgatacatttgggtcaggt
gccgttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagagaagctg
ccagtggcagttaatgaacaaacaggcaatggagaaagggatgagatggacttgttgggt
gaccatgaggagaatctggcagaaaggctcagtaagatggtgattgaaaatgagctagaa
gatccagctatcatgagggcagtgcagaccaggccagttctgcaaccccaaccaggaagt
ctcaattccagcatctgggatggatctgaagttctgagacgaatccgagggccactgctt
gctcaggaaatgcctacggtgtctgtattagaatatgccctgcctcagaggcccccacag
ggtccagaagatgatcgagacctttctgagcgcgcattaccacggcggtcaacttcacct
atcattgggagtcctcctgttagagccgtccccataggcaccccacctaagcagatggct
gtacccagcttcaaccaacagatcctgtgtccgaagcctgttcatgtccgacccccaatg
ccaccacgttatcctgctccctatggtgacagagtatctccaaaccagctctgcagtgtc
gcgaattcttccctactcggtcaccctttccctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctaccgcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccgcttgctgccatgaatcccaagttg
ctgcaagggcgagtagggcaggtgcttcccccagcacctggcttccgtgccttctttagt
gctgcgccccctgccgctccgccgcctccgccccagcactctcctggcccagggccgcac
ctgcaaaacctaagatctcaggccccaatgtttagaccagacacaactcacctccatcca
cagcaccgtcggctcttgcatcagagacagcaacagaacagaaatcagcatcgcagtctc
aatggtgccggagacagagggagtcaccggagcagtcaggaccatctccgcaaggacccc
tatgccaacctcatgctgcagcgagagaaggattgggtctctaaaatccagatgatgcag
ctgcagagcactgatccctacctggatgatttctattaccagaattactttgaaaaactg
gagaaactgtcagctgctgaagaagtacaaggcgaaggcccgaaaaaggagcgcaccaag
ctcattacccctcaggtggccaaactggagcacgcctataagccagtgcagttcgagggc
tctttgggaaagcttactgtctctagtgtgaataacccccgaaaaatgatcgatgctgtg
gtgacatcacggagtgaggatgatgagacaaaagaaaagcaggttcgggacaagagacga
aaaacccttgtcatcattgaaaaaacctatagtttactcctggatgtggaggattatgaa
aggcggtacctcctaagtctagaagaagagcgacctgccctggcggatgaaagaaagcac
aaaatttgtagcatgtatgacaacttaagggggaaattgcctggacaagagaggccaagt
gatgaccactttgtacagatcatgtgtatccgaaaagggaagagaatggttgcccgtatt
cttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaatctc
ccttttcttatcaagaaggatgcacaagatgaggtgctgccatgcttactgagtcccttc
tctctgctcctctatcaccttccgtcagtgactgtcaccagccttctgcaacagctaatg
aacctacctcagagcacagccgcaccagcaccctccaaccctcacctcactgctgtgctc
cagaacaagtttggcctgtcactgctcctcgtcgtcctgagccgtggggaagacctgcag
agttcagaccctgctacagaatcaacacagaacaaccagtggacggaggtgatgttcatg
gcgacccgagaacttctgcggattccccaagcagccctggccaagccaatctctataccc
acaaacctggtgtccctcttttctcgctatgttgaccgacagaaactgaacttgctggag
acaaagctgcagctagttcaggggatccgataa
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