Odobenus rosmarus divergens (Pacific walrus): 101374239
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Entry
101374239 CDS
T05148
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X2
KO
K20225
capicua transcriptional repressor
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101374239 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oro03000
]
101374239 (CIC)
Transcription factors [BR:
oro03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101374239 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101374239
NCBI-ProteinID:
XP_004408209
UniProt:
A0A2U3WHK3
LinkDB
All DBs
Position
Unknown
AA seq
1618 aa
AA seq
DB search
MYSAHRPLVPASGAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHPVASTQSKEPAESAAVAHEQPPGGTGNADPGRPPGATCPESPGPGPPHTLGVVEPG
KGPPPTAEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSM
SETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSGSCGTERLHAVGGPGSARPRAFSHSGV
HSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGAPGPFSASSEGGALAASGRPPLLP
TRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGATDIDLKCKERVTDSESGDSS
GEDPEGSKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPPAPAFGKGYGPTPSSSSSSS
SPASSSASAATSFPLGSGTFKAQESGQGSREGPLRPPPPGAGGPVTPSKATRFLPTDPAA
FRRKRPESVGGLEPPGPSVIAAPPGGGGSVLQTLVLPPNKEEREGGGTRMPSAPAPSLAY
GAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTAGRAEASPNDTAGARTEPVTGSRA
PGSSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPAPPA
VQFIAQGAPGSGAATGSGAGAGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQ
VAPAPAPAPGTKAAAPGGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPP
PKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFSVPVQNGA
QPPSKIIQLTPVPVSTPSGLVPPLSPATLSGPTSQPQKVLLPSSTRITYVQSAGGHALPL
GTSPTSSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSGQAPLLAPGQVGVSPVPSP
QLPPTCTAPGGPVITAFYPGSPAPTSSAPLAQPSQAPPGLVYTVATSTTPPAATILPKGP
PAPATATPAPTSPFPNATGGCSMTYSLVAPKAQRPTPKAPQKVKAAIASIPVGSFEAGAP
GRSGPAARQPLEPGPAREPPTPESELEGQPTTPAPPPPPETWAPTARSSPPPPPPAEERT
STKGPEAMASKFPGSSSDWRVPGLGLESRGEPPTPPSPAPAPAPAPGGGGGGGGSSSEGS
SGRAAGDTPERKEAAGAGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEV
LPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSA
KCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQAT
AAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPTGTAAAPVPT
PSPAGGPDPTSPGSDSGTAPAAPPLPPPPEPGPGQPGWEGPPQPSPPPPGPSPAATGR
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagcccacaggcccctggtgcccgcgtccggcgcggcctctcgtggcctcggc
atgttcgtgtggacgaatgtggaacctcgctctgttgccgtgttcccctggcactcctta
gtcccttttctggcccccagccagcccgacccctctgtgcagccaagtgaggcccagcaa
cctgccagccacccagtggcctccacccagagcaaagaacccgctgagtccgcggctgtc
gctcacgagcagccaccaggtggtacagggaatgctgatcctgggcggccccctggagcc
acctgccctgagagcccagggcctggaccaccccacactttgggggtggtggaacctgga
aagggtccccctcctactgctgaggaggaggcccctggccctccaggagagccccggctg
gacagcgagacggagagtgaccatgatgatgccttcctgtccatcatgtctcctgagatc
cagttgcccctgccacccgggaaacgccggacccagtccctcagtgcgctgccaaaggaa
cgagactcctcttcggagaaggatggacgcagccccaacaagcgggagaaggaccatatc
cggcggcccatgaatgccttcatgatcttcagcaagcggcaccgggccctggtccaccag
cgtcaccccaaccaggacaaccggaccgtcagcaagatcctgggcgagtggtggtacgcc
ctggggcccaaggagaagcagaagtaccatgacctggccttccaggtgaaagaggcccac
tttaaggctcacccagactggaagtggtgcaacaaggaccggaagaagtccagttcagag
gccaagcccacgagcctggggctggcaggcgggcacaaggagactcgggagcggagcatg
tcagagacagggactgctgctgcccctggagtgtcctcggagctcctgtccgttgcagcc
cagacactcttgagctcggataccaaggctccggggagcggctcctgtggaacagagcgt
ctgcatgcggtggggggacctggctcagcccggccccgagccttctcccacagtggggtc
cacagcctggatggtggggaagtagatagccaggcactacaggaactgactcagatggtg
tctggccctgcatcctattctggtccaaagccttccacccaatatggggctccaggcccc
ttctcagcctccagtgagggaggtgccctggcggccagtgggcgacccccgctgctgccc
acccgggcctcccgttcccagcgtgcagccagtgaggacatgaccagtgacgaggaacgc
atggtcatctgtgaggaggagggagatgatgatgtcatcgctgacgacggctttggcgcc
actgacattgacctcaagtgcaaggagcgggtgactgacagcgagagcggagatagctct
ggggaggacccggagggcagcaagggctttggccggaaggtgttctcgcctgtgatccgt
tcctcctttacccactgccgcccaccgctggaccctgagcccccagggcccccggatcca
ccagctccagcctttggcaaaggctacgggcccaccccatcctcctcctcctcctcgtcc
tcacctgcctcctcctcagcctctgccgccacctccttccccctgggctcagggaccttc
aaggcccaggagtcagggcagggcagcagggaaggcccactgcggcccccacctcctggg
gctgggggtccggtgacaccttccaaggccacccggttcctcccaacggatcctgctgcc
ttccggcgcaagagacctgaaagtgtgggaggcctggagccaccgggaccctcggtcatt
gcggcacctcctggcgggggaggaagtgtcctgcagacgctggtcctgcccccaaataag
gaggaacgggaaggcggcggaacccgcatgccctcggccccagccccatcactggcctat
ggggccccagcagcccccctgtcccgcccagctgctaccatggtcaccaacgtggtgcgg
cctgtcagtagcactcctgtgcccatcgcctctaagcccttccccaccgctggccgggct
gaggcatctccaaatgacacagcaggtgccaggactgagccggtcacagggtcccgggcg
cctgggagctccccgctgggcgtaagcttggtgtattcggacaagaagtcggcagcagcc
acctcgccagccccacatctggtggctgggcccctcctgggcactgtggggaaggcccct
gccacagtcaccaacctgctggtgggcacacccggttatggggccccggcgccccctgct
gttcagttcatagcccagggggcccctggcagtggggccgctacaggctcaggagcaggt
gctgggagtggccccaatgggccagtgcccctgggcatcctgcagccaggtgccttgggc
aaggctgggggaatcacccaggtgcagtacatcctgcccacgctgccccagcagcttcag
gtggcgcctgccccagcaccagcccctgggaccaaggcagcagctcctggtggccccgca
cccaccaccagcatccgtttcaccctcccaccgggcacctccaccaacggcaaagttctg
gcggccaccgcacccactcctggcatccccatcctgcaatccgtaccctccgccccgccc
cccaaagcccaatcggtttctcctgtgcaggccccacccccgggcggctcagcccagctg
ctacctgggaaggtcctggtgcccctggcggcccctagcatgtcggtgcggggcggaggg
gctggccagccactgcccctggtgagcccgccgttctcggtacctgtgcagaatggggcc
cagccacccagcaagatcatccagctgactccggtgcccgtgagcacacccagcggcctg
gtgccgcccctcagcccagccacactctctggacccacctcgcagcctcagaaggtcctg
ctaccctcctccaccagaatcacctacgtgcagtcggcgggtgggcacgcgttgcccctg
ggcaccagccctacgtccagccaggctggaacagtcacctcgtatgggcccacgagctcg
gtagccctaggcttcacctcgctggggcccagcggacccgcctttgtgcagcccctactt
tcaggccaagccccgctgctggctcctggccaggtgggcgtgtcacccgtgcccagtccc
cagctgccgcccacctgcacagcccccggaggtcccgtcatcacggcgttttaccctggc
agccctgcacccacctcctcagcacccctggcccagccatcccaggcgcccccaggcctg
gtctacaccgtggccactagcaccaccccacctgctgccaccatcctgcccaagggccca
ccagcccctgccactgccaccccggcccccaccagccctttccctaatgccacaggtggg
tgctctatgacctacagcttagtggcccccaaggcccagcggcccacccccaaggccccc
cagaaagtgaaggcggccatcgccagcattcccgtgggttcctttgaggcaggtgcccct
gggcggtcaggccctgcagcccggcagcccttggagcctggcccagctcgggagccccct
acccccgaatctgagcttgaggggcagcctacgacaccggcccctccaccgcccccagag
acctgggctcccacagcccggagcagccccccgccgcccccacctgctgaggagcgaaca
agcaccaagggccctgaggccatggccagcaaattccccggctcgtcttcagactggcga
gtccctgggctgggtctggagagccggggggagcctcccacccctcccagcccagcgcca
gctccagccccagcccctggcggcggcggcggcggcggcggcagcagcagtgagggcagc
agtgggagggcagctggggacacccccgagcgcaaggaggccgctggtgccggcaagaag
gtgaaggtgcggcccccgcccctgaagaagacctttgactctgtggacaacagggtcctg
tcggaggtggacttcgaagagcgctttgccgagctgcctgagttccggcctgaggaggtg
ctgccctcgccgaccctgcagtctctggccacgtcgccccgggccatcctgggctcctac
cgcaagaagaggaagaactccaccgacctggactcagcccccgaggaccccacctcgccc
aagcgcaagatgaggagacgctccagttgcagctccgagcccaacacccctaagagtgcc
aagtgcgagggggatatcttcacctttgaccgcacaggtacggaagccgaggatgtgctc
ggggaactggagtacgagaaggtgccgtactcctccttgcggcgcaccctggaccagcgc
cgggccctggtcatgcagctcttccaggaccatggcttcttcccatcagcccaggccacg
gcagccttccaggcccgctacgcagacatcttcccctccaaggtctgtctgcagttgaag
atccgcgaggtgcgccagaagatcatgcaggcggccactcccacggagcagccccctgga
gccgaggcccccctccccggaccaccccccactggcactgctgctgcccctgtccccact
cccagccctgctgggggccctgaccccacctcacctggctcggactctggcacagctccg
gctgccccgccactgcccccacctccagagccgggtcccggacagcctggctgggagggg
cccccccagccctcccccccaccccccggcccctccccagctgccacaggcaggtga
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