Odobenus rosmarus divergens (Pacific walrus): 101374645
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Entry
101374645 CDS
T05148
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain
KO
K06236
collagen type I alpha
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04151
PI3K-Akt signaling pathway
oro04510
Focal adhesion
oro04512
ECM-receptor interaction
oro04611
Platelet activation
oro04820
Cytoskeleton in muscle cells
oro04926
Relaxin signaling pathway
oro04933
AGE-RAGE signaling pathway in diabetic complications
oro04974
Protein digestion and absorption
oro05146
Amoebiasis
oro05165
Human papillomavirus infection
oro05205
Proteoglycans in cancer
oro05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101374645 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101374645 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101374645 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101374645 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
101374645 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
101374645 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
101374645 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
101374645 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101374645 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
101374645 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
101374645 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101374645 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oro00536
]
101374645 (COL1A2)
Glycosaminoglycan binding proteins [BR:
oro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101374645 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
101374645
NCBI-ProteinID:
XP_004394135
UniProt:
A0A2U3VH59
LinkDB
All DBs
Position
Unknown
AA seq
1367 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLQEATARKGPAGDRGPRGERGPPGPPGRDGDDGTPG
PPGPPGPPGPPGLGGNFAAQYDPGKGVGLGPGPMGLMGPRGPPGASGAPGPQGFQGPAGE
PGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGI
RGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGS
VGPLGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGVSGPVGPPGN
PGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGN
KGEPGSAGPQGPPGPSGEEGKRGPNGEAGSTGPSGPPGLRGGPGSRGLPGADGRAGVMGP
PGPRGVTGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNVGPAGKEGPMGLPGIDGRPGP
IGPAGARGEPGNIGFPGPKGPTGDPGKAGEKGHAGLAGARGAPGPDGNNGAQGPPGPQGV
QGGKGEQGPAGPPGFQGLPGPAGTAGEAGKPGERGLPGEFGLPGPAGPRGERGPPGESGA
AGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGPSGPGGLPGERGAAGIPGGKGEKGE
TGLRGEVGNPGRDGARGAPGAVGAPGPAGATGDRGEAGTAGAAGPAGPRGSPGERGEVGA
AGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGSAGPSGPNGPPGPAGSRGD
GGPPGATGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGAHGP
PGFAGEKGPSGEPGTAGPPGTTGPQGLLGSPGILGLPGSRGERGLPGVSGSVGEPGPLGI
AGPSGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGA
VGAPGPHGPVGPTGKHGNRGEPGPAGSVGPVGAAGPRGPSGPQGVRGDKGEPGDKGPRGL
PGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGV
RGSQGSQGPAGPPGPPGPPGPPGPSGGGYDFGYEGDFYRADQPRSPPSLRPKDYEVDATL
KSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFST
GETCIRAQPENIPAKNWYRNSKVKKHIWLGETINGGTQFEYNAEGVTTKEMATQLAFMRL
LANHASQNITYHCKNTIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSK
KTNEWRKTIIEYKTNKPSRLPILDIAPLDIGDTDQEFRVDVGPVCFK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacgtcgtgcctagca
acatgccaatctttacaagaggcaactgcaagaaagggcccagccggagatagaggacca
cgtggagaaaggggtccaccaggcccaccaggcagagatggtgacgacggtaccccaggc
cctccgggtccacctggtcctcctggcccccctggtcttggcgggaattttgcggctcag
tatgatcctggaaaaggagttggccttggccctggaccaatgggtttgatgggacctcga
gggccacctggtgcgtctggagctcctggccctcaaggtttccaaggacctgctggtgag
cccggtgaacctggtcaaactggtcctgcgggtgctcgtggtccacctgggcctcctggc
aaggctggggaggatggtcaccctggaaaacctggacgacctggtgagagaggagttgtt
ggaccacagggtgctcgtggtttccctgggactcctggacttcctggcttcaagggcatt
aggggacacaatggtctggatggattgaagggacagcccggagctccaggtgtgaagggt
gaacccggtgcccctggtgaaaatggaactccaggtcaaacaggagcccgtgggcttcct
ggtgagagaggacgcgtcggtgcccctggaccagctggtgcccgtggaagtgatggaagt
gtgggtcctttgggtcctgctggtcccattgggtctgctggccctccaggctttccaggt
gctcctggccccaagggtgaactcggacctgttggcaaccctggtcctgctggtcccgcg
ggtccccgcggtgaagtgggtcttccgggtgtctccggccccgttggacctcctggtaac
cctggagccaacggcctgactggtgctaagggtgctgctggcctgcccggtgtggctggg
gctcccggcctccctggaccccgcggaattcctggccctgttggcgctgctggtgctact
ggggccagaggactcgtcggtgagcctggtccagctggttccaaaggagagagcggcaac
aagggtgagcccggctctgctgggccccaaggtcctcccggtcccagtggtgaagaagga
aagagaggccccaatggtgaagccggatccactggcccctctggacctcctgggctgaga
ggaggtcctggttctcgtggtcttcctggagctgacggcagagctggtgtcatgggccct
cccggccctcgtggtgtgactggccctgctggtgtccgaggtcccaacggagattctggt
cgccctggagagcctggcctcatggggccccgaggttttcctggtgcccctggaaatgtt
ggcccagctggtaaagaaggtcccatgggcctccctggtattgatggcaggcctggtcca
attggcccagctggagcaagaggagagcctggcaacatcggattccctggacccaagggc
cccaccggtgatcctggcaaagctggtgagaaaggtcatgctggtcttgctggtgctcgg
ggtgccccaggtcctgatggaaacaatggtgctcaggggcctcctggaccacagggtgtc
caaggtggaaaaggtgaacaaggtcccgctggtcctccaggcttccagggtctgccgggc
cccgcaggtacagctggtgaagctggcaaaccaggagaaaggggtctccctggtgaattt
ggtctccctggtcctgctggtccaagaggggagcgtgggccccctggagaaagtggcgct
gctggtccttctggacctattgggagccgaggtccttctggaccccctgggcccgacgga
aacaagggtgaacctggggtgcttggtgctccgggcaccgcgggtccatctggtcccggc
ggcctcccaggagagaggggtgctgccggcatacctggaggcaagggagaaaagggtgaa
actggtctcagaggggaagttggtaacccaggcagagatggtgcccgtggtgcccctggt
gctgtgggtgcccctggtcctgctggagccactggtgaccggggtgaagccggtactgcc
ggtgctgccggtcctgctggtcctcgaggtagccctggtgaacgtggtgaagtcggtgcc
gctggccccaatggatttgctggtcctgctggtgctgctggtcaacctggtgctaaagga
gagagaggaaccaaagggcccaagggtgaaaatggtcccgtcggtcccacaggccctgtc
ggatctgctggcccatctggtccaaatggtccccctggtcctgctggaagtcgtggtgat
ggcggcccccctggtgctactggttttcctggtgctgctggacggactggtcctcctggg
ccctctggtatcaccggcccccctggtccccctggcgctgctggtaaggaaggactccgt
gggcctcggggtgaccaaggtccagttggccgaacaggagaaaccggcgcacatggtccc
cccggctttgccggcgagaagggtccctctggagagcccggtaccgctggccctcctggc
accacaggtcctcaaggtctccttggttctcctggcattctgggtctcccaggctctcga
ggtgaacgtggtctaccaggtgtttctggatctgtgggtgaacctggacctctcggcatc
gctggcccgtctggggctcgtgggccccccggggctgtgggcgcaccgggagtgaacggc
gctcctggcgaagctggtcgtgatggcaaccctgggaacgatggccccccaggccgcgat
ggtcaacccggacacaagggagagcgtggttaccctggcaacatcggtcccgttggcgct
gtgggcgcacctggtcctcacggccccgtgggtcccactggcaaacacggaaaccgtggt
gaacccggtcctgctggttctgtgggtccagtcggtgctgccggcccgagaggccctagt
ggcccacaaggtgttcgaggtgataagggagagcctggtgacaaggggcccagaggtctt
cctggcttaaagggacacaatggactgcaaggtcttcctggtctcgctggtcaacatggc
gatcaaggtgcacctggttctgtggggcctgccggtcctaggggccctgctggtccttcc
ggccctgctggcaaggacggtcgcaccggccatcccggtacagtcggccctgctggcgtc
cgtggctctcaggggagccaaggtcctgctggccctcccggcccccctggtcctcctggc
cctcccggcccaagtggtggcggctatgactttggttacgaaggggacttctacagggct
gaccagcctcgctcgccaccttctctcagacccaaggattatgaagttgatgctactctg
aaatccctcaacaaccagatcgagacccttctcactcctgaaggctctaggaagaaccca
gctcgcacatgccgtgacttgagactcagccacccagagtggagcagcggttactactgg
attgaccctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctact
ggcgaaacctgcatccgggctcaacctgaaaacatcccagccaagaactggtacagaaat
tccaaggtcaagaagcacatctggttaggagaaactatcaatggtggtacccagtttgaa
tataatgctgaaggagtaaccaccaaggaaatggccactcaactcgccttcatgcgcctg
ctggccaaccatgcctctcaaaacatcacctaccactgcaagaacaccattgcctacatg
gatgaggagactggcaacctaaagaaggctgtcattctgcaaggctccaatgatgttgaa
ctggttgccgagggcaacagcaggttcacctacactgttcttgtagatggctgctctaaa
aagacgaatgaatggagaaagacaatcattgaatataaaacaaataagccatcccgcctg
cctatccttgatattgcacctttggacatcggtgatactgaccaagaattcagggtggac
gttggcccagtctgtttcaaataa
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