Odobenus rosmarus divergens (Pacific walrus): 101374978
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Entry
101374978 CDS
T05148
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03015
mRNA surveillance pathway
oro04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101374978 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101374978 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oro03021
]
101374978 (SYMPK)
03019 Messenger RNA biogenesis [BR:
oro03019
]
101374978 (SYMPK)
Transcription machinery [BR:
oro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101374978 (SYMPK)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101374978 (SYMPK)
U7-dependent histone pre-mRNA processing factors
101374978 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
101374978
NCBI-ProteinID:
XP_004401016
UniProt:
A0A2U3VZF3
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MAGSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAADIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKPESVLIKRRLSAQGQAISVVGSLSSMSTLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEVPAGPLEEDDLEPLALAPAPAPAPRPPQDL
IGLRLAQEKALKRQLEEEQKLKPGGVGAPSSSSSSSTRPGPPQPEETIDFREEGPECETP
AIFISMDDDSGLTEAALLDSSLEGPLPKEAAGGLTSKEERSPQTLTPAGEDTMKTPSPAA
EESGEPESKGNS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcagtagtggggatagtgtcactcggcggagcgtggcgtcacagttcttcaca
caagaggagggcccgggcatcgatggcatgaccacctcagagagagtggtggatctcctg
aaccaggcagcactgatcaccaatgattcaaagatcacagtactcaagcaggtccaggaa
ttgatcatcaacaaagatcctacactactagacaacttcttggacgagatcatcgctttc
caagcggacaagtcgatcgaagtgcgcaaatttgtcattggcttcatcgaggaggcatgc
aagcgagacattgagttactgctaaaactgatcgcaaacctcaacatgctcttgagggat
gagaatgtgaatgtggtgaagaaggccatcctcactatgacccagctctacaaggtggcc
ttgcaatggatggtaaagtcacgagtcatcagtgagctccaggaggcctgctgggacatg
gtgtctgccatggctgcggacatcattctgctgctggattctgacaatgacggcatccgc
acccacgccatcaagtttgtggagggcctcatcgtcaccttgtcaccccgcatggctgac
tcggaggtgccccgacgccaggagcatgacatcagcctagaccgcatccctcgtgaccac
ccctatatccaatacaatgtgctgtgggaagaaggcaaggcagccttggagcagctgctc
aagttcatggtgcaccccgccatctcctccatcaacctgaccacggcgctgggctccctt
gccaacatcgcccgccagaggcccatgttcatgtcagaggtgatccaggcctatgaaacc
ctgcatgccaacctgcccccgacgctggccaaatctcaggtgagcagtgtgcgcaagaac
ctcaagcttcacctgctgagtgtcctgaagcacccagcctccttggagtttcaggcccag
atcaccaccctgctggtggacctgggcacaccccaggcagagatcgcccgcaatatgccc
agtggcaaggatgcccgcaagcggccccgagatgactcagattccacgctcaagaagatg
aagctagagcccaacctgggggaagatgatgaggacaaggacttggagccaggcccgtcg
ggaacctccaaggcctcagcccaaatctcagggcagtcagacacagacatcacagctgag
ttcctgcagcccttgctgacacctgacaatgtggccaatctggtcctcatcagcatggtg
tatctgcctgaggccatgcccgcctccttccaagccatctataccccagtggagtcagca
ggcactgaagcccagatcaagcacctggctcggctcatggccacacagatgacagctgca
ggactggggccaggtgtggagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtaaagccagagagtgtcctgatcaagcgacgcctgtcagcccagggccaggccatc
tcagtggtgggctccctgagctccatgtctactctggaggaggaggcgccccaggccaag
aggaggccagagcccatcatccctgtcacgcagccccggctggcgggtgctggtgggcgc
aagaaaatcttccgcctgagcgatgtgctgaagcccctgacggacgcccaggtggaggct
atgaagctgggcgctgtgaagcggatccttcgggcggagaaggctgtggcctgcagcggg
gccgcccaggtgcgcataaagatcctggccagcctggtgacacagtttgactcgggcctg
aaggccgaggtcctgtccttcatcctggaggatgtgcgggcccgcctggacttggccttc
gcctggctgtaccaggagtacaacgcctacctggcagccggtgcctcgggcaccctggac
aagtacgaggactgcctcatccgcctgctctccggcctgcaggagaagccagaccagaag
gatgggatcttcactaaagttgtgctggaggcgccactgatcaccgagagtgccctggag
gtgattcgcaagtactgcgaggatgagagtcgcacttacctgggcatgtccactcttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgttctgctagacctc
agctcccacgagaaggacaaggtgcgttcccaggccctactgttcatcaagcgcatgtat
gagaaggaacagctgcgagagtatgtggagaaatttgccctcaactacctgcaactcctg
gtccaccccaacccgccatccgtgctgtttggagccgacaaggatacagaggtggcggcg
ccctggaccgaggagaccgtaaagcagtgtctgtacctgtacctggctctcctgcctcag
aaccacaagctcatccacgaactggcagccgtgtacacggaggccatcgccgacatcaag
cggacggtgctgagggtcatcgaacagccgatccgaggaatgggcatgaactcaccagag
ctgctcctgttggtagaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacggacaaagtcccgccctccccagagctggtgaagcgggtccgggatctc
taccacaagcgattgccagatgtccgcttcctcatccctgtgctcaatggactggagaag
aaagaagtgatccaggccctgccaaagctcatcaaactcaaccccattgtggtgaaagag
gtcttcaaccgcctgctgggcacccagcacggcgaagggaactcagccttgtccccgctg
aaccctggagagcttctgatcgcactgcacaacatcgactcggtgaagtgtgacatgaag
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtctctgaccatgtacccccgcttggggggtttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcaacgcaccaagccccagagtttccaggtcatcctgcagttgccaccccagcag
ctgggtgccgtctttgacaagtgcccagagctccgggagcccctgctggcacacgtccga
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agtggcaagcaggagccagaggccaaggaagtacctgcagggcccctggaagaggacgac
ctggagcccttggccctggccccggccccagccccagccccccggccccctcaggacctc
atcggcctgcggctggcccaggagaaagccttaaagcgtcagctagaggaggaacagaag
ctgaagccaggaggagtgggagccccctcgtcgtcgtcctcttcctccacccggccaggc
cctccccagcccgaagaaaccatagatttccgggaggaggggcctgagtgtgagaccccg
gctatcttcatcagcatggatgacgactcggggctgaccgaggctgcactcctggactct
agtcttgaggggcccctacctaaggaggcagcgggcgggttgacctcaaaggaggagcgc
agtccccagaccctcacccctgccggagaagacaccatgaagacccccagccccgccgct
gaggaatccggggaacccgagagcaaggggaacagctga
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integrated database retrieval system
