Odobenus rosmarus divergens (Pacific walrus): 101375295
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Entry
101375295 CDS
T05148
Symbol
YBX1
Name
(RefSeq) nuclease-sensitive element-binding protein 1
KO
K09276
Y-box-binding protein 1
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oro03000
]
101375295 (YBX1)
03019 Messenger RNA biogenesis [BR:
oro03019
]
101375295 (YBX1)
03041 Spliceosome [BR:
oro03041
]
101375295 (YBX1)
Transcription factors [BR:
oro03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
101375295 (YBX1)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
101375295 (YBX1)
mRNA cycle factors
Common to processing body (P body) and stress granule
101375295 (YBX1)
Spliceosome [BR:
oro03041
]
Common components
Common spliceosomal components
General mRNP proteins
101375295 (YBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
DUF8529
OB_RNB
Cpxcr1_C
Motif
Other DBs
NCBI-GeneID:
101375295
NCBI-ProteinID:
XP_012420023
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MAQRSPGRLNEECERSVRVRSVAGAESGPQRALSSPTAAAGLVTITPREEPQLPQPAPVT
ITATMSSEPAPFRVYPEGAARRLRRPKWAGRFPFPHVLPAQQPRPPAGSAPRACLRGLRR
PEPTHVCCGARARPRRRKAVRWSRAAAERARATKVLGTVKWFNVRNGYGFINRNDTKEDV
FVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNH
YRRYPRRRGPPRNYQQNYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGR
RPQYSNPPVQGEVMEGADNQGAGEQGRPVRQNMYRGYRPRFRRYGVLLAKDSLERMAMRK
IRKIKEMRPKVSSHLNVGTAATSITDADAQKTLNHKMAKRQKQPIHQLRIRPLPRLSRAG
LSKCRLTISTIIRFSHPTRRNEDEIPAIRNEQKIGAEDLKCLLFAH
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaagatcacctggaaggttgaatgaggaatgtgaaagaagtgtcagagttcga
tcggtagcgggagcggagagcggaccccagagagccctgagcagccccaccgccgccgcc
ggcctagttaccatcacaccccgggaggagccgcagctgccgcagccggccccagtcacc
atcaccgcaaccatgagcagcgagcccgctcccttccgcgtgtatcctgagggcgcggcg
cgccgcctacgcaggcccaagtgggccgggcgcttcccgttccctcacgtgctccccgcc
cagcagccgcgcccgcccgccggctccgcgccccgggcctgcctgcggggcctccgccgc
cccgagcccacccacgtgtgctgtggggcccgcgcgcggcctcggaggagaaaggctgtc
aggtggtcgcgggccgcggcggagcgcgcgcgggcaacgaaggttttgggaacagtaaaa
tggttcaatgtaagaaacggatatggtttcatcaacaggaatgacaccaaggaagatgta
tttgtacaccagactgccataaagaagaataaccccaggaagtaccttcgcagtgtagga
gatggagagactgtggagtttgatgttgttgaaggagaaaagggtgcggaggcagcaaat
gtgacaggccctggtggagttccagtgcaaggcagtaaatatgcagcagaccgtaaccat
tatagacgctatccacgtcgcaggggtcctccacgcaattaccagcagaattaccagaat
agtgagagtggggaaaagaacgagggatcggaaagtgctcccgaaggccaggcccaacag
cgccggccctaccgcaggcgacggttcccaccttactacatgcggagaccctatgggcgt
cgaccacagtattccaaccctcctgtgcagggagaagtgatggaaggtgctgacaaccag
ggtgcaggagaacaaggtagaccagtgagacagaatatgtatcggggttatagaccacga
ttccgcaggtatggggtcctcctcgccaaagacagcctagagaggatggcaatgaggaag
ataaggaaaatcaaggagatgagacccaaggtcagcagccacctcaacgtcggtaccgcc
gcaacttcaattaccgacgcagacgcccagaaaaccctaaaccacaagatggcaaagaga
caaaagcagccgatccaccagctgagaattcgtccgctcccgaggctgagcagggcgggg
ctgagtaaatgccggcttaccatctctaccatcatccggtttagtcatccaacacgaaga
aatgaagatgaaattccagcaataagaaatgaacaaaagattggagctgaagaccttaag
tgcttgctttttgcccactga
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