Odobenus rosmarus divergens (Pacific walrus): 101375815
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Entry
101375815 CDS
T05148
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro00100
Steroid biosynthesis
oro01100
Metabolic pathways
Module
oro_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
101375815 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
oro01006
]
101375815 (FDFT1)
Enzymes [BR:
oro01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
101375815 (FDFT1)
Prenyltransferases [BR:
oro01006
]
Terpene biosynthesis
Squalene/phytoene synthase
101375815 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SQS_PSY
HAUS4
Motif
Other DBs
NCBI-GeneID:
101375815
NCBI-ProteinID:
XP_004395308
UniProt:
A0A2U3VK73
LinkDB
All DBs
Position
Unknown
AA seq
487 aa
AA seq
DB search
MEEKLYAGPTTPMAVAACGIKAMSLFKRTLVLSPAAAPRGTGTAAGSAPRGCPLSPAAWP
SKDWPRGEGVCGRLRTPPAAGRLPLSHSCCSASPTSVCLLCPQDSLSSSLKTCYKYLNQT
SRSFAAVIEALDGEMRHAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSYLYEPDWR
YMDSKEKDRQVLEDFPTISLEFRNLAEKYQTVIVDICRKMGIGMAEFLDKHVTSEQEWDK
YCHYVAGLVGIGLSRLFSASELEDPLVGEDIECANSMGLFLQKTNIIRDYLEDQREGREF
WPQEVWSKYVKKLGDFAKPQNIDSAVKCLNELITNALHHIPDVITYLSRLRNQSVFNFCA
IPQVMAIATLAACYNNQQVFKGVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIP
SSHPSSGKTRQIISTIRTQNLPNCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTED
YVQTGEH
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaactctacgcgggccctacgactccgatggccgtggccgcctgcggcatc
aaggccatgtccctgttcaagcggaccttggtgctgagccccgccgcggcaccccggggc
acgggcactgccgcaggctctgcgccgcgcggctgccccttgtctcccgccgcctggccc
tccaaggactggccgcgcggggagggcgtctgcggcaggctgcggaccccgccggcggcc
ggccgcctgcccctgtcccactcctgctgctctgcatctcccacctccgtgtgtcttctc
tgcccccaggactcgctgagcagcagcttgaaaacttgttacaagtacctcaatcagacc
agtcgcagttttgcagctgtcatcgaggcgctggatggggaaatgcgtcatgcggtatgc
atattttatctggtcctccgagctctggacactctggaagatgacatgaccatcagtgta
gaaaaaaaagttccactgctacacaactttcactcttacctttatgaaccagactggcgg
tatatggacagcaaggagaaggatcgacaagtgctagaggacttcccaacgatctccctt
gagtttagaaatttggctgagaaatatcaaacagtgattgttgacatttgccggaaaatg
ggaattgggatggcggagtttttggataaacacgtaacatctgaacaggagtgggacaag
tactgtcactatgtcgccgggctggtgggaattggcctttcccgtctattctcagcctca
gagttagaagaccccttagttggtgaagacatagagtgtgccaattctatgggcctgttt
ctgcagaaaacaaacatcattcgtgattatctggaagaccagcgagaaggaagagagttt
tggcctcaagaggtttggagcaaatatgttaagaagttgggcgattttgctaagccacag
aatattgactcggctgtgaagtgcctgaacgaacttataaccaacgcactacaccacatc
ccagatgtcatcacttacctttcaagacttagaaaccaaagtgtgtttaacttctgcgct
attccacaggtgatggccattgccactctggctgcctgttataataatcagcaggtgttc
aaaggcgtagtgaagatccgaaaagggcaagcagtaactctaatgatggacgccaccaat
atgccggcggtcaaagctataatctaccagtacatggaagagatttatcatagaatcccc
agctcacacccatcttctggtaaaacaaggcagatcatctccaccatcaggacacagaat
cttcccaattgtcagctgatctcccgaagtcactactcccctatttacctgtcatttgtc
atgctcttggctgccctgagctggcagtacctgagcaccctgtcccaggtcacagaagac
tatgttcagaccggagagcactga
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