Odobenus rosmarus divergens (Pacific walrus): 101375854
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Entry
101375854 CDS
T05148
Symbol
PABPC4L
Name
(RefSeq) polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03015
mRNA surveillance pathway
oro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101375854 (PABPC4L)
09123 Folding, sorting and degradation
03018 RNA degradation
101375854 (PABPC4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oro03019
]
101375854 (PABPC4L)
03041 Spliceosome [BR:
oro03041
]
101375854 (PABPC4L)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
101375854 (PABPC4L)
mRNA cycle factors
Stress granule specific factors
101375854 (PABPC4L)
Spliceosome [BR:
oro03041
]
Complex C
Other components
Complex C specific factors
101375854 (PABPC4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_7
RRM_Nup35
RBD_DEAH11
RRM_10
RRM_occluded
RRM_MARF1
RBD_RDR6
Nup35_RRM_2
DUF4523
RRM_3
Motif
Other DBs
NCBI-GeneID:
101375854
NCBI-ProteinID:
XP_012418076
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MNVAAKYRQASLYVGDLNADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLK
LADAQKALDTMNFDMIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSA
FGKILSSKVMSDDHGSRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREA
ELQNKVNEFTNVYIKNFGDDMDDERLKEAFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSH
EAAKKAVEEMNGKDINGQLLFVGRAQKKSERQAELKQMFEQLKQERFRRCQGMKLYIKNL
DDTIDDEKLWREFSSFGSISRVKIMREEGRSKGFGLICFSSPEEATKAMAEMNGRILGSK
PLYVALAQRP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagcagccaagtaccgccaggcatccctgtatgtgggtgatctcaatgcagat
gtcaccgaggacctgctgttcaaaaagttcagcgctgtggggcctgtgctgtccatccgc
atctgcagggacctggtcacccgccgctctctgggctatgcctacgtgaactttctgaag
ctggctgatgcccagaaggccctggacacaatgaactttgacatgataaaaggcaaaccc
atccgtctcatgtggtctcaacgtgatgcctacttaaggaaatctggcattgggaacgtg
ttcatcaagaatctggacaaatctattgataacaaaaccctttatgaacatttttcagct
tttgggaagatcctgtcctccaaggtgatgagtgatgatcacggctctaggggctatgca
tttgtgcacttccagaaccagatcgcggccgacagggccatcgaggagatgaatggggcc
ctgcttaaggactgcaggctgtttgttggcaggttcaaaaaccgtaaagatcgggaagcc
gagctccaaaacaaggtcaatgaattcaccaatgtttacatcaaaaactttggagatgac
atggatgatgagagactgaaggaagcttttagtaaatatggcaaaaccctgagtgttaag
gtgatgacagattccagtgggaaatccaaaggctttggctttgtgagttttgatagccat
gaggctgccaaaaaggctgttgaagaaatgaatggaaaggacataaacggacagctgctt
tttgtaggccgggcgcaaaagaaatcagagcggcaggctgagttaaagcaaatgtttgag
cagctgaaacaggaaagatttcggagatgccagggcatgaagctctatattaagaacctc
gatgataccattgatgatgaaaaactgtggagggaattttcttcgtttgggtcaattagc
agagtcaagataatgcgggaagaagggcgaagcaaagggtttggcttgatctgcttctct
tctcctgaggaggccactaaagcaatggctgagatgaatggccgaatcttgggctctaag
ccactctacgttgccctggcccagaggccctag
DBGET
integrated database retrieval system
