Odobenus rosmarus divergens (Pacific walrus): 101376302
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Entry
101376302 CDS
T05148
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03013
Nucleocytoplasmic transport
oro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101376302
03015 mRNA surveillance pathway
101376302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oro03019
]
101376302
03041 Spliceosome [BR:
oro03041
]
101376302
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101376302
Spliceosome [BR:
oro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
101376302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
101376302
NCBI-ProteinID:
XP_012423325
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MDAGFFHGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFKQLEVKNPDSKMMQINLTGFLNGXNARAFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKNKRDKEEKESSREKRERSRSPRRRKSRPP
SPRRRSSPVRRERKRSHSRSPPHRTKSWSPSPALEKKEKTPEVPEPSVKVKEPSVQEATS
SDILKVPKPEPVPEPKEPSPEKFQKEKEKEKTRPRSRSCIKSRSWTRSCSPSHTRPRRRH
RSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSS
SSSRSRSPPKKPLKRTSSPPRKTRRLSPSASPPRRRHKPSPPAAPPPKTRHSPTPQQSNR
TRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVLQR
RQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRQRRHSPSRSASPSPPKLQKETSL
RIQMGKXWQSPVTKSGRRRRSPSPPSTRRRRSPSPAPPPRRRRSPTPPPRLRTPSPAPRR
RSPSPRRYSLPIQRRYSPSPPPKRRTACPPPPPKRRASPSPPPKVSHSPPSKQRSSPVTK
RHSPSLSSKHRKGSSPSQSTREPWSPQPNKRHSPSPWPRAPQTSSSPPPVRRGASSSPQR
RQSPSPSTRPIRRVSRTPEPKKSKKAASPSPQSIRRVSSSRSVSGSPEPAAKKPPGPQSP
VQSQSPSTNWSPAVPVKKAKSPTPSPSPARNSDPEXGGKKKKKKKDKKHKKDKKHKKHKK
EKAVVAAAAAAVTPAAPAAPTTTSAQEEPEAEPEPKKETESEPEDNLDDLENHLCEKALR
SMPKAQVSPQS
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccacggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaagctactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaacgagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaacagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactgggtttttgaatgganaaaatgctagagca
tttatgggagaactgtggcccctgctcttaagtgcacaagaaaacattgctggaatccct
tccgcttttctagaactgaagaaagaagaaataaaacagagacaaattgaacaagaaaag
ttggcatctatgaaaaagcaagatgaagacaagaataagagggataaggaagaaaaagaa
agcagcagagaaaaaagggaaaggtctcgaagcccaagaagacgcaaatccagacctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccctcacagaaccaagagctggagtccttcccctgctctggaaaagaaggaaaaaact
ccagaggtcccagaaccatcagtgaaagtaaaagaaccttcagtacaagaggccacttct
agtgacatcctgaaggttcccaaacctgaacctgtaccagagcctaaagaaccttctcca
gagaaattccaaaaagaaaaggagaaggagaagacccgaccaagatctcggtcatgtatc
aaatcaagatcctggacacggtcttgctctccttctcatactcgacctagacggcgtcat
agatcccgatcaagatcatactcacctagaaggaggccaagtccgagaaggcggccatct
cctcgaagaagaaccccaccaagacgaatgccgcctccacccaggcatagaaggagtaga
tctccagtgagacgaagaaggcgttcatcagcatccttgtctggaagtagctcatcatcc
tcttcatcccgttcccggtcaccgccaaagaagcctcttaagaggacatccagcccccct
cgaaaaactcgtaggttatctccttcagcaagtcctcccaggcgaaggcataagccatca
cctccagcagctccaccgccaaaaactcgtcattccccaacaccccagcagtcaaaccgt
acgagaaaaagtcgtgtttctgtctctccagggagaacttcaggtaaagtgacaaaacat
aaagggactgagaaaagagagtccccttcaccagcacctaagcctagaaaagtagagtta
tctgaatcggaagaagataaaggtggcaaaatggctgcggcagattctgtgctgcagaga
cgtcagtacagacgacagaaccagcagtcctcatctgattctggctcctcttcttcctca
gaagatgagcgacccaagaggtcccatgtgaagaatggtgaggtaggcaggcagcggaga
cattccccttcccggagtgcctctccatcacctccaaagctccagaaagagacttccctt
cggatacaaatgggaaagtgatggcaatcgccagtgactaaaagtggtagacggaggagg
agtccctccccaccatctaccagaaggcgacgttctccttctcctgcccctcctcctcgc
aggcgcaggtcccccactccgccaccacgactaaggactccttctcctgccccccgccgg
cgctcaccttccccaagaagatattctcttccgatacagaggagatactctccttctcca
cctccaaagagaagaacggcttgtccccctccccctcctaaacgaagggcatcaccatct
ccaccaccaaaggtctcccattctccaccttccaaacaaagaagctccccagtcaccaaa
agacattcgccttcattatcatcaaagcataggaaagggtcttccccgagccagtctacc
cgggagccctggtcaccacaaccaaacaaaaggcattcaccctcaccatggcctcgagct
cctcaaacctcctcaagtcctccacctgttcgaagaggagcatcatcatcaccccaaaga
aggcagtccccttctccaagtactaggcccattaggagagtctccaggactccagaaccc
aaaaagtcaaaaaaggctgcctcaccaagccctcagtctataaggagggtctcgtcctcc
cgatctgtctcaggatctcctgagccagcagctaaaaaacccccaggacctcaatctcct
gtccagtcccagtccccctctaccaactggtcaccagcggtaccggtcaaaaaggctaaa
agcccaaccccaagcccatctccagcgaggaactcagacccagaanggggtggaaagaaa
aagaagaaaaagaaggacaagaaacacaaaaaggataagaagcacaaaaaacacaagaag
gaaaaggccgtggtggcagccgctgcagcagccgtcacccctgcggcccccgctgccccc
acgaccacatcggcacaggaggaaccggaggcagagcccgaacctaagaaggagaccgaa
agtgagcccgaagacaacctcgacgacttagaaaaccacctgtgcgaaaaggcgctgagg
tcgatgccgaaggctcaagtgtccccacagtcttag
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