Odobenus rosmarus divergens (Pacific walrus): 101376887
Help
Entry
101376887 CDS
T05148
Symbol
PRPF39
Name
(RefSeq) pre-mRNA-processing factor 39 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oro03041
]
101376887 (PRPF39)
Spliceosome [BR:
oro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101376887 (PRPF39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
101376887
NCBI-ProteinID:
XP_004415030
UniProt:
A0A2U3WZA2
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MQNSHMDEYRNSSNGSTGNSSEVVVEQSADFSTEIMNVTEMEQSPDGSPNVNATTEENEI
TNAVDLPVTETEANFPPEYEKFWKTVENNPQDFTGWVYLLQYVEQENHLMAARKAFDKFF
IHYPYCYGYWKKYADLEKRHDNMKQSDEVYRRGLQAIPLSVDLWIHYINFLKETLDPGES
ETNSTIRGTFEHAVLAAGTDFRSDRLWEMYINWENEQGNLREVTAIYDRILGIPTQLYSH
HFQRFKEHVQNNLPRDLLTGEQFIQLRRELASVNGHSGDDGPPGDDLPSGIEDITDPAKL
ITEIENMRHRIIEIHQEMFNYNEHEVSKRWTFEEGIKRPYFHVKPLEKAQLKNWKEYLEF
EIENGTHERVVVLFERCVISCALYEEFWIKYAKYMENHSIEGVRHVFSRACTIHLPKKPM
VHMLWAAFEEQQGNINEARNILRTFEECVLGLAMVRLRRVSLERRHGNMEEAEHLLQDAI
KNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIERDKENTKLYLNLLEMEYSGDL
KQNEENILNCFDKAIHGSLPIKMRITFSQRKVEFLEDFGSDVNKLLNAYDEHQTLLKEQD
SLKRKAENGSEEPEEKKAHTEDTTSSSTQMIDGDLQANQAAYNYSAWYQYNYQNPWNYGQ
YYPPPPT
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattctcacatggatgagtacagaaattctagtaatggcagcacaggcaacagt
tcagaggtagtggtagaacagtctgctgatttcagtactgagattatgaatgttacggaa
atggaacagtcccctgatggatctcctaatgtgaatgcaactacagaagaaaatgaaata
acaaatgctgtggaccttccagtgacagaaacggaagcaaatttccctccagaatatgaa
aagttctggaaaactgtagaaaacaatcctcaggattttacaggctgggtatatttgctt
cagtatgtagaacaggagaatcacttgatggctgccaggaaagcatttgacaaatttttc
atacactatccgtattgctatggttactggaaaaagtatgcagaccttgaaaagcggcat
gacaacatgaaacaatcagatgaggtgtatcgtcgggggcttcaggcaatacctcttagt
gttgacctgtggatacattatataaacttcttaaaggaaacattggaccctggtgaatct
gagacaaacagtacaataagaggaactttcgagcatgcggttctagctgcaggaacagat
ttccgatctgacagactgtgggaaatgtatataaactgggaaaatgaacagggaaacctg
agagaagttacagctatatatgatcgtattcttggtattccaacacagctgtatagtcac
cattttcagagatttaaagaacatgtacagaataacttgcctagagatctgctaactggt
gaacagtttattcagctgcgaagggaattagcttctgtaaacggacatagtggtgatgat
ggtcctcctggtgatgatctaccgtcaggaattgaagacattactgatccagcaaagcta
attacggaaatagaaaacatgagacatagaatcattgaaattcatcaagaaatgtttaat
tataatgagcatgaagttagtaaaaggtggacatttgaagaaggtattaaaagaccttat
tttcatgtgaaaccattggaaaaggcacaactaaaaaactggaaagaatacttagaattt
gaaattgaaaatgggactcatgaacgagttgtggttctctttgaaagatgtgtcatatca
tgtgccctctatgaggagttttggattaagtatgccaagtacatggaaaaccatagcatt
gaaggagtgaggcatgtcttcagcagagcttgcactattcatcttccaaagaaacccatg
gtgcatatgctttgggcagcttttgaggaacagcagggtaatattaatgaagccaggaat
atcttgagaacatttgaagaatgtgttctaggattggcaatggttcgtttgagaagagta
agtttagaacgacggcacggaaatatggaagaagctgaacatttgcttcaggatgccatt
aagaatgccaaatcaaataatgaatcatcgttttatgctatcaaactagcccggcatctt
ttcaaaatacaaaaaaaccttccaaaatcaagaaaggtgcttttggaagcaatcgaaaga
gacaaagagaatacaaagttatacctcaatttacttgaaatggaatatagtggtgacctc
aaacaaaatgaagaaaatatcctaaattgttttgacaaagctatacatggttcattacct
attaaaatgagaattacattttctcagagaaaagtggaatttcttgaagattttggttca
gatgttaataagcttttgaatgcttatgatgaacatcaaacactcctaaaagaacaggat
tccttaaaaaggaaagcagaaaatggatcagaagaaccagaggaaaagaaagctcacaca
gaagatacaacttcatcatctacacagatgattgatggtgatttacaggcaaatcaagct
gcatataattatagtgcctggtatcaatacaattatcagaatccttggaattatggacag
tattaccctccccctccaacctga
DBGET
integrated database retrieval system
