Odobenus rosmarus divergens (Pacific walrus): 101377867
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Entry
101377867 CDS
T05148
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03082
ATP-dependent chromatin remodeling
oro04714
Thermogenesis
oro05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101377867 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101377867 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101377867 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oro03021
]
101377867 (SMARCC1)
03036 Chromosome and associated proteins [BR:
oro03036
]
101377867 (SMARCC1)
Transcription machinery [BR:
oro03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101377867 (SMARCC1)
Chromosome and associated proteins [BR:
oro03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101377867 (SMARCC1)
PBAF complex
101377867 (SMARCC1)
GBAF(ncBAF) complex
101377867 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
SWIRM-assoc_3
Chromo
BRCT_2
DUF919
SpeFL
Motif
Other DBs
NCBI-GeneID:
101377867
NCBI-ProteinID:
XP_004399361
UniProt:
A0A2U3VVL0
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MAAAAGGGGVGAAAGAAGAGGAATAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPNIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPIESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDPSKGDQSRSLDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
GAEEEKMETDTDGQQPEKAENKGENETDEGDKAQDGENEKNSEKEQDSEVSEDTKSEEKE
TEENKELTDTCKERESDLGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKS
LVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRA
RQQMEQQQHGQNPQQAHQHSGGPGLAPLGAAGHPAMMPHQQPPPYPLMHHQMPPPHPPQP
GQIPGPGSMIPGQPMPGRMIPTVAANIHPPGSGPAPPGMPPMPGNILGPRVPLTAPNGMY
APPPPPPPPPPPADGVPPPPAPGPPASAAP
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggcggcgggcggcggcggggtaggggcggcggcgggcgccgcgggcgcggga
ggtgcggcgacggccgcgggcctggccgtttatcggcggaaggacggtggcccggccagc
aagttttgggagagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcatgcggatgctcctaccaacaaaacactcgctgggctg
gtggtacagcttcttcagttccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaaactcccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaagtataaaaatgaacagggatggcgtagatttgatctacag
aatccatcccgaatggatcggaatgttgaaatgtttatgaacattgaaaaaacattggtg
cagagcaactgtctgaccagacccaacatctacctcattccagacattgatctgaagttg
gctaacaaattaaaagatattatcaaacgacatcaggggactttcactgatgagaagtca
aaggcttcccaccacatttatccgtatccttcctcacaagaggatgaagagtggttgaga
ccggtgatgagaaaagataagcaggtgttagtgcattgggggttttacccagacagctat
gatacttgggtccatagtaatgatgttgatgcggaaattgaagatccaccaattccagaa
aagccatggaaggttcatgtgaaatggattttggacactgatgttttcaatgaatggatg
aatgaggaggattatgaggtggacgagaacaggaagcccgtgagctttcgtcagcgaatt
tcaacgaagaatgaagagccagtcagaagtccagagagaagagataggaaagcatcagct
aatgctcgaaagaggaaacattcgccttcccctccacctcctacacccatagaatcccgg
aagaagagtggaaagaaaggccaagctagtctttatgggaagcgcagaagtcagaaagag
gaagatgagcaagaagatcttaccaaggacatggaagacccaacaccggtacccaacata
gaggaagtggtgcttccaaaaaatgtgaacccaaagaaagacagtgaaaacacacctgtt
aaaggaggaactgtcgcagatctagatgagcaggatgaagaaacagtcacaacaggagga
aaggaagatgaagatcctagcaaaggtgatcaaagtcgttcacttgaccctggagaagat
aatgtgacagagcagaccaatcacattattattcctagttatgcgtcgtggtttgattat
aactgtattcatgtgattgaacggcgtgctcttcctgagtttttcaatggaaagaacaaa
tccaagactccagaaatatacttggcatatcgaaattttatgattgacacatatcgccta
aacccccaagaatatttaaccagcactgcttgtcggaggaacttgactggagacgtgtgt
gctgtgatgagggttcatgcctttttagagcaatgggggcttgttaattaccaagtggat
ccagaaagtcggcccatggcaatgggacctcctcctactcctcattttaatgtattagct
gataccccctctgggcttgtgcctctacatcttcgatcacctcaggtccctgctgctcag
cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt
cttcgtactgacatttactccaagaaaaccttagcaaagagtaaaggtgctagtgctgga
agagaatggactgaacaggagacccttttgctcctggaggccctggagatgtataaggat
gattggaacaaagtgtcagagcatgttggaagtcgtactcaggatgaatgcatcctccac
tttctgaggcttcctattgaggacccataccttgagaattcggatgcttccttggggccc
ctggcctaccagcctgtccctttcagtcagtcaggaaacccagtcatgagcactgttgct
tttttggcatctgtggtggaccctcgcgtggcatctgctgcagcaaaagcagctttggaa
ggggctgaagaggaaaaaatggaaacagatactgatggtcaacagcctgaaaaggcagaa
aacaaaggggaaaatgaaacagacgaaggggacaaagcacaagacggagaaaatgaaaaa
aatagtgagaaggagcaggacagtgaagttagtgaggataccaaatcagaagaaaaggaa
actgaagagaacaaggaactcactgatacttgtaaagaaagagaaagcgatctcgggaag
aagaaagtagaacacgaaatttccgaaggaaatgtggccacggctgccgcagctgctctc
gcctcagctgcaaccaaagccaagcatctggctgctgtggaggaaagaaagatcaagtct
ctggtggccctcttggttgagacacaaatgaagaaattggagatcaaacttcgacatttt
gaggaactggaaactatcatggacagagagaaggaagctttagaacaacagaggcagcag
ttgctcactgaacgccagaacttccacatggaacagctgaaatacgctgaattacgagcc
cggcagcagatggaacagcagcagcacgggcagaaccctcagcaggcacaccagcactca
ggaggacctggcctggcgccgcttggagcagcagggcaccccgccatgatgccccatcag
cagccccctccctaccctctgatgcaccaccagatgccaccacctcatccaccgcagcca
ggtcagataccaggtccaggttccatgatccctgggcagcccatgccaggccgcatgatt
cccaccgttgcagccaacatccacccccccggaagtggcccagcccctcctggtatgcct
ccaatgccaggaaacatcttaggaccccgggtacccctcacggcacctaatggcatgtat
gcccctccgccgccgccgccgccgccgccgccgcccgctgatggagtccctccgcctccc
gctccaggcccaccagcctcggccgccccctag
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