Odobenus rosmarus divergens (Pacific walrus): 101378464
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Entry
101378464 CDS
T05148
Symbol
SYNPO
Name
(RefSeq) synaptopodin isoform X1
KO
K21112
synaptopodin
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
101378464 (SYNPO)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
101378464
NCBI-ProteinID:
XP_004402879
UniProt:
A0A2U3W4B4
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MLGPHLPPPPRGLSEDRPTPCTFRIPDGSYRCLALEAEESSSEEGLQGEAGLVNLEEDRN
GDNSACRATQGAPELPNALGIQPPSCSREARGGPQHDNHASQDWDVVKAQQVVTARSSSN
PSPGPRVAQKPALGPSTSLTERDLKEAKARSRQIAAQLTTPPSSSSRGVQLFNRRRQRVN
EFTLENHGRRGQKPSQESLRVPPASPTGYASGLSLSPTSLPEPGPPRNANNQSPDVGVPA
HSMEGCSEKATLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSPASPP
TAEVHSPAADVNKNVSSLSATLIVPASNSTHSLPAADNNQNPPAPVTPQSLPLSNSQQPS
EAQLPPNGTVSDSKPGTLCSSGQPPEPAAEVRSSTLLIDKVSAPPTTTNTFSKETTPLSS
SGTPAPDFMSSSLLIDVQPSAPAVSAEQETSGWAATPTPAKLYSEVHFTLAKPPSVVNRT
ARPFGIQAPGSTSQMERSPMVERRHLGEKALAPQPPSVADRSPRPQRHVMSHSPMVERRS
VAQRSPALERRPLGNFTPPPTYAETLSTAPLASRVRSPPSYSALYPSSDPKPSPLKGQAV
PASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEAGVDDE
PFALGAEASNFQQESAPRDRASPAAAEEILPEWASCLKSPRIQAKPKPKPNQNLSEASGK
GAELYARRQSRMEKYVIESSGHTELARCPSPTMSLPSSWKYSTNAPGAFRVASRSPARTP
PASLYHGYLPENGVLRPEPTKQPAYQLRPSLFVLSPIKEPVKPSPRAASPAKPSSLDLVP
SLPKGALPASPALPRPSRSSPGLYTSPGQDGLQPTAVSPTYSSDLSPVSPSRAWSPRARQ
APRPSFSTRNAGIEAQVWKPSFCFK
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtccccacctcccacctccaccccgtggactcagcgaagacaggcctacccct
tgcaccttccggatccctgatgggagctacaggtgtctggccttggaggctgaggagagc
agcagcgaggagggcctgcagggagaggcagggctcgtgaacttggaggaggacaggaat
ggggacaactcggcttgcagagccacccaaggagcaccagagctgcccaatgccctgggc
atccagccacccagctgctccagggaagcacgaggggggccccagcatgataaccatgcc
agccaggactgggacgtggtgaaggctcagcaggtggtgacagcccgctccagctccaac
cccagccctgggcccagggttgcccagaaaccagccttgggcccgagcactagcctcact
gagagagatctgaaagaggcgaaggcccggagccggcagatcgcagcccagctgaccacc
ccccccagctccagctcccgcggcgtccagctcttcaacaggcggcggcagagggtgaac
gagttcaccttggaaaaccacggccggaggggacagaagcccagccaggagtccctcaga
gtgccccctgccagccccacaggctatgcctcagggctcagcttgagtcccacctcactc
cctgaaccaggccctccaaggaacgccaacaaccagagccctgacgtaggggtccctgct
cacagcatggagggatgctcggagaaggccaccttgctgcggcacctggagaaggtggcc
agcgaggaggaggaggtacccctggtggtttatttgaaggagaacgcagccctgctgacg
gccaacgggctgcacctgtcccagaaccgagaagcccagcagagcccagcaagcccgccg
acggctgaggtccacagccccgctgcagatgtcaacaaaaacgtttcctcactcagtgcc
accctcatcgtgccagcctctaacagcactcacagcctgccggccgcagacaacaaccag
aaccccccggcacctgtcaccccgcagagcctgccgctttcaaacagccaacagccctcg
gaggcacagctccctcccaatggcacggtgtcagattccaaacccggcaccctgtgttcc
agcgggcagcccccagagccggctgcggaggtgagatccagcacactcctaattgataag
gtgtcagctccacctaccaccaccaacaccttctccaaagaaacgactcccctctccagc
tccgggaccccagcgccagatttcatgtcaagctccctgctcatcgatgtacagcccagt
gccccagcggtgtcagcagaacaagagacgtctgggtgggcggccacgcccacgcccgcc
aagctatacagtgaggtccacttcacactggccaagcccccatcagtggtcaacaggacc
gccagacccttcgggatccaggcgccagggagcaccagccagatggagcggagccccatg
gtagagagacgacatctcggggagaaggccctggctccccagccccccagcgtggcagac
aggagccctcggccacagagacacgtgatgtcccatagccccatggtggaaaggaggtct
gtggcacagcgaagccctgccttggagagacgccccttggggaacttcactccacccccc
acctatgccgagaccttgtccacggcccccctggcttcccgggttaggtctcccccgtcc
tactctgccctttaccccagctctgaccccaagccttctcctctgaagggccaggcagtt
cctgccagcaagacgggcattttggaggagtcgatggcccgcaggggcagccggaaatcc
atgttcaccttcgtggagaagcctaaggtgaccccgaatccagacctgctggatctggta
cagacggccgatgagaagcggaggcagagggaccagggggaggcaggcgtggacgacgag
cccttcgcgctgggggccgaggcctccaactttcagcaggagtcagcaccccgggacagg
gccagccctgcggcggccgaggagatcctcccggagtgggcctcgtgcctcaagtcaccg
cgcatccaggccaagccgaagcccaagcccaaccagaacctgtccgaggcctccgggaag
ggggccgagctctacgcccgccgccagtcccggatggagaagtacgtcatcgagtcctcg
ggccacaccgaactggcccgctgcccttcgcccaccatgtccctgccttcatcctggaaa
tattccaccaatgctcctggcgccttccgagtggcatcccggagcccagctcggaccccg
cccgcctccctctaccacggctacctgcctgagaacggggtcctgcgccccgagcccacc
aagcagccggcctaccagctgcggccctcgctcttcgtcctctcgcccatcaaggagcct
gtcaagccctcgccgagagccgcctctcctgccaagccgagctccctggacctggtgccc
agcctccccaagggggccctcccggcgtccccggccctgcctcggccctcccgctcctcc
ccgggcctctacacctcgcccggccaggatggcctccagcccacagccgtgagcccgacc
tacagcagtgatctctctcccgtgtcgccctccagggcgtggtctccccgtgccaggcag
gcccccaggccctccttctccacccggaatgctgggatcgaggctcaggtgtggaagcct
tccttctgcttcaagtaa
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