Odobenus rosmarus divergens (Pacific walrus): 101379171
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Entry
101379171 CDS
T05148
Symbol
COL15A1
Name
(RefSeq) collagen alpha-1(XV) chain
KO
K08135
collagen type XV alpha
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101379171 (COL15A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oro00535
]
101379171 (COL15A1)
Proteoglycans [BR:
oro00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
101379171 (COL15A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
101379171
NCBI-ProteinID:
XP_004392392
UniProt:
A0A2U3VD98
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MAPRRNARCWRLLWLLSVSALLPAVTRTRSATELASQGHLDLTELIGVPLPSSVSFVTGY
GGFPAYSFGPGANVGRPARTLIPPAFFRDFAISVTVKPSSDRGGVLFAVTDAFQKIIYLG
LRLSGVEDGRQRVILYYTEPGSHVSHEAAAFLVPVMTHRWTRFAVVVQGEEVMLLVDCEE
HSHVPFQRSSQPLAFEPSAGIFVGNAGATGLERFTGSIQQLTVHPDPRIPEEMCEAEESS
ASGEASGLLETEGVAEILEAVTYTQAPSKEAEVEPINTPPTPSPPSEDAELSGEPVPEGT
PETTDLSVVVHRSPEQGSGEVLNDTLEGVHTMDGAPITDVGSGDGAFIHVSEEVSLAATA
AVGEAEVPTSTAREAETSGVPTGGPALSLSTEVMGEGVTLGADAEEGSAAAAAGEAEVPG
STAGEVEAGSVPMGGATLSTAIQDAGEGVTRGAVGEGMFTTPAAAAEVPLSTSEEEETRR
LPTGGLVPPTPTAAPEQAVASGSGDEEDLAAAAREESLSGTVAEELDSSPPEGPPLPIPT
VASERGVTPSQRGLVGRKGQVGPQAEKAEAGEGLPGPPEPARPTGPTVGAEAEGSGPGWG
SDGGSGSGDPVRGEELLRGPPGPPGPPGSPGIPGKPGTDVFMGPPGSPGQDGAAGEPGPP
GPEGQPGADGASGLPGMKGEKGARGPNGSVGEKGDPGNRGLPGPPGKNGQVGSPGVMGPP
GPPGPPGPPGPGCAAGLGFEDTEGSGSIRLLHEPRISGPVAPSGPKGEKGDQGPKGDRGM
DGASIVGPPGPRGPPGRIEVLSSSLTNVTHRFMNLSDVPELIGPPGPEGVPGLPGFPGPR
GPKGDTGVPGFPGLKGEQGEKGEPGAILTGDIPLERLQGRKGEPGVHGAPGPMGPKGPPG
HKGEFGLPGRPGRPGLNGLKGAKGDRGIMMPGPPGLPGPPGPPGPPGAVINIKGAVFPIP
VRPHCKTPADTTHPGNSELITFHGVKGEKGSWGLPGSKGEKGDQGAQGPPGPPVDPAYLR
HFLNSLKGENGDWRIKGEKGDFHGDFSVSGPPGPPGSPGLVGQKGETVIGPQGPPGAPGL
PGPPGFGRPGSPGPPGPPGPPGPPAILGAAVALPGPPGPPGQPGLPGSRNLVTAFSTMDD
MLQKAHLVIEGTFIYLRDSTEFFIRVRDGWKKLQLGELIPIPADSPPPPALSSNPHQPPP
PLMPLSSVGYERPALHLVALNTPFSGDLRADLQCFQQARAAGLLSTYRAFLSSHLQDLST
VVRKAERYSLPIVNLKGQVLFNNWDSIFSGHGGQFNTHVPIYSFDGRDVMKDPSWPQKVI
WHGSSPHGVRLVDNYCEAWRTADMAVTGLASPLSTGKILDQKTYSCANRLIVLCIENSFM
TDARK
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaggaggaacgcgcgctgctggcgcctactgtggctgctttcggtctccgcg
cttctccccgctgtcacccggacccgctccgcgacagagttggcttcccagggccacctg
gacctcacggagctcatcggtgtcccattgccctcatctgtgtcctttgtcacgggctat
ggtggcttcccagcctacagcttcgggcctggtgccaacgtcggccgcccggccaggacc
ctcatcccacctgccttcttcagggactttgccatcagtgtcacggtgaagcccagcagt
gacagaggcggcgtactctttgctgtcaccgatgccttccagaagatcatctacctgggc
ctgcggctctcgggcgtggaggatggccgccagcgggtcatcctctactacacggagcca
ggctcccacgtgtctcacgaggctgctgccttcctggtgcccgtgatgacccacaggtgg
acccgctttgcggtggttgtccagggcgaggaggtgatgctcctcgtggactgcgaggag
cacagccacgtccccttccagcggtcctcccagcccttggcttttgagcccagtgcagga
atctttgtgggcaatgcaggagcaacggggctggagagattcaccggctccatacagcag
ctcaccgtccaccctgaccccagaatccccgaggagatgtgtgaagccgaagaatcctcg
gcttcaggagaagccagcgggcttctggaaacagagggcgtcgctgagatcttggaagct
gtcacctacactcaagccccgtctaaagaagcagaagttgaacccataaacacacctcca
actccatcgcctccttctgaggatgcggagctttctggcgagcctgtacctgaggggact
ccggaaaccaccgacttgagtgtcgtcgtgcacagaagccctgagcaagggtctggtgag
gtcctgaatgacacactggagggagttcatactatggacggtgcccccattacagatgtt
ggctctggggatggggccttcattcatgtctctgaagaggtgagtttggcagccacagca
gcagtcggggaggctgaggtgcccaccagcactgccagggaagcagagaccagcggtgtg
cccactggggggccagccctctccttgtccactgaggtcatgggggaaggggtcactctg
ggtgcagatgctgaagaaggctcggcagccgctgcagctggggaggccgaggtgcccggg
agcaccgccggggaagtggaggctggcagtgtacccatggggggagccaccctctccacg
gccatccaggacgccggggaaggggtgacacggggtgcagtcggtgaaggaatgttcaca
acaccagcagctgcagcagaagtgcccctcagcacttctgaggaagaggagactcgcagg
ctccccacaggtggcctggttccccctacacccacagcggcccctgagcaagcagtcgct
tctggttctggtgatgaggaggacctggcagcagccgcaagagaggagtccctgtctggg
actgtggcagaagagctggacagcagtccccctgaggggccaccactgcccatacccaca
gtggcttctgaaagaggggtcactccatctcagagaggccttgtgggaaggaaagggcag
gttgggccccaagcagaaaaggccgaagctggggaggggcttcccggcccccctgaacct
gccaggcccaccggacccacggtgggagctgaggccgagggctccggcccgggctggggc
tcggacggcggctctggctctggtgacccggtgcgcggtgaggagctgttaagaggtccc
ccaggccccccgggcccacctggctcacctgggattccaggaaaaccaggaactgatgtt
ttcatgggaccccctggatcgcctggacaggatggagctgctggtgaacctgggcccccg
ggccctgagggacagcctggagctgatggagcctccggccttcctgggatgaagggagag
aagggcgcaagagggcccaatggctcagtcggtgaaaagggcgaccctggcaacagaggc
ttaccaggacctccagggaaaaatggacaagttggctctcctggggtcatgggaccccct
gggcctcctggacctccagggcccccaggccctggatgtgcagcgggacttgggtttgag
gatactgaagggtctggaagcatcaggctgttacatgaacccagaatctccggaccagtg
gctccgagtggtcccaaaggagaaaaaggagaccagggacccaagggtgacagaggcatg
gatggagccagcattgtgggaccccctggacccagagggccgcccggtcgcatcgaggtc
ttgtccagttccttgaccaacgtcacccacaggttcatgaatctctcggacgtccctgag
ctcattgggcctccgggtccggagggcgtacctgggctgccaggatttccaggccctcga
ggaccaaaaggtgacaccggtgtgcctggatttccaggactgaaaggagaacagggcgag
aagggagagccaggtgccatcctgacaggggacattcctctggaacggctgcaggggaga
aagggtgaacctggagtgcatggagccccgggaccaatggggcccaaaggaccaccggga
cacaaaggagagttcggccttcccggacgacctggtcgcccgggactgaatggcctcaag
ggcgccaaaggagaccgagggatcatgatgccgggcccacctggcttacctggtcctcca
gggcccccaggaccccctggagctgtgattaacatcaaaggagctgtcttccccatacca
gtccggccacactgcaaaacgccggctgacaccactcatcctgggaattcagagctcatc
acctttcatggtgttaaaggggaaaaaggatcctggggtcttccgggctcgaaaggagag
aaaggcgaccagggggcccaaggaccaccaggccctccggtggatccggcttacctaaga
cactttctgaacagcttgaagggggagaatggagactggaggatcaagggagaaaaagga
gactttcacggtgacttctctgtgtcggggcctccaggcccgccaggaagtcctggcttg
gttggccagaaaggggagactgtcattgggccccagggacccccgggggctcctggcctg
cctgggcctcctggctttggaagacctggatcccctgggccaccaggacccccagggcca
ccaggaccaccagcgatccttggagcagctgtggcccttccgggcccacccggccctcca
ggacagccagggcttcccggatccagaaatctggttacggcatttagcaccatggatgac
atgctgcagaaagcacatttggtcattgaagggacgttcatctacctgagagacagcact
gagttcttcattcgggtccgagatggttggaagaaattacagctaggagaactgatcccc
attcccgctgacagcccaccgccccctgcgctctccagcaacccacatcagccaccacct
ccgctgatgccgctttcaagtgtcggctacgagaggcctgcactgcacttggttgctctg
aacacaccattctccggagaccttcgagctgatttgcagtgcttccagcaggccagggct
gcagggctgttgtccacctaccgggccttcttatcctcccatctgcaagacctctccacg
gttgtgaggaaagcagagagatacagccttccaatagtgaacctcaagggccaagtactt
ttcaacaattgggactcaattttttctggccacggaggtcagttcaatacacacgttcca
atatattcctttgatggccgagacgtgatgaaggatccttcctggccccagaaggtcatt
tggcatggctccagcccccacggagtgcgtcttgtggataactactgtgaagcgtggcgg
acggctgacatggcagtcacgggactggcctccccactgagcacagggaagattctggac
cagaaaacatatagctgtgctaataggctcattgttctgtgtatcgaaaacagtttcatg
acagatgccaggaagtaa
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