Odobenus rosmarus divergens (Pacific walrus): 101379468
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Entry
101379468 CDS
T05148
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101379468 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oro03032
]
101379468 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
oro03400
]
101379468 (TOPBP1)
DNA replication proteins [BR:
oro03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
101379468 (TOPBP1)
DNA repair and recombination proteins [BR:
oro03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101379468 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
101379468
NCBI-ProteinID:
XP_004412132
UniProt:
A0A2U3WS35
LinkDB
All DBs
Position
Unknown
AA seq
1513 aa
AA seq
DB search
MSRNDKEPFLVKFLKSSDNSECFFKALESIKEFQSEEYLQIITGEEALKIKENDRSLYIC
DPFSGVVFDHLKKLGCRIVGPQVVIFCLHHQRCVPRAEHPVYNMVMSDVTVSCTSLEKDK
REEVHKYVQMMGGRVYRDLNISVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKIARYTDVNMEDFKCPIFLGCIICVTGLCSLDRKAVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVDKGFCQDESIYKTEPRPETKTVPDTSTPT
GWINTVDSRTLSDVSHISNISASCINESMCNSVLNSKVEPTLENLENLDVSAFQAPEDLL
DGCRIYLCGFSGRKLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWDKSAHRP
HAVGAKWLLECFSKGYMLPEEPYIHANYQPVEIPVSDQPESKTALLKKNNSFSKKDLASD
EKHEQADEDLLSQYVNNNPTVVEAVKSEVEPFNDSTHISLQEENQSSVTRCLPDASTITE
EGLFSQKSFLVLGFSNENESNIANIIRENAGKIVSLQSRIVADYAVVPLLGCEVEATVGE
VVTNTWLVTCIDYQTLIDPKSNPLFMPVPVMAGMTPLEGCVISFSQCAGAEKDSLTFLAN
RLGASVQEFFVRKSNAKKGMFASTHLVLKEPGGSKYEAAKKWNLPAVTTSWLLETARMGK
RANESHFLIEKSTKEEQSLETEITNRVNLNPDTPEHPVAQLETHRKTAVTPLDMNRFQSK
AFRAVISQHTRQVSVSPPVGQRLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETP
GGPSQQKRKLSTPLSEVIVRNLKLALANSSRNAVALSASPPLEDAQSEKEEAPKPLHKVV
VCVSKKLSKKQGELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKERGVHIV
SEHWLLECAQEYKHLPESLYPHTYNPKMSLDISTVQDGRLSNSRLLSADSTTKDDEPNHL
PIEENDIDSITTGNKESATSNGDGRNDSKGALTQTLEMRENFQKQLQEIMSATSIVKPQG
QRASLSRSGCNSASSTPDSTRSARSGRSRVLEALRQSRQIVPDVNTEPSQNEQIIWDDPT
AREERARLASNLQWPSCPTQYSELQVDLKKLEDSPSQEPLHDSEIAKQAVCDPENVCVTE
APKHPISEELETPVKDSHLIPTPQAPSIAFPLANPPVAPHPREKIITIEETHEDLKKQYI
FQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPTCTHIVVGHPLRNEKYLASVAAGKWVL
HRSYLEACRTAGHFVLEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKLQQRQESGI
VEGAFSGWKVILYVDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDFNKLKPDDS
GVNIAEAAAQNVYCLKTEYIADYLMQESPPQVENYCLPEAISFLPNNKEPGPGLSQKRKA
PTEKNKIKRPRVN
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatgacaaagaaccgtttcttgtgaagtttttaaagtcttcagacaattcc
gaatgtttttttaaagctcttgagtcaataaaagagttccaatcagaagaatatcttcag
attattacaggagaagaagcattgaagataaaggaaaatgataggtcactttatatctgt
gacccttttagtggcgttgtctttgatcacctcaaaaagcttggctgcagaattgttggc
cctcaagtagtcatattttgtttgcaccaccagcgatgcgtcccaagagctgaacatcca
gtttataatatggttatgtctgatgtaactgtatcttgtacaagcctggaaaaagataaa
agggaagaagttcataaatatgtacaaatgatgggtggacgtgtatatagagaccttaat
atatcagtaactcaccttattgcaggagaagttggcagcaaaaaatatttagttgctgca
aacctaaagaaacctattttgcttccttcttggattaaaacactctgggaaaagtcacaa
gagaaaaaaatagctaggtatactgatgtaaacatggaagacttcaagtgtcctattttt
cttggttgcataatctgtgtgactggcttgtgtagcttagacaggaaggcagttcagcaa
ctcacagttaagcacggaggtcaatacatgggacagctgaaaatgaatgaatgtacacac
ctcattgtgcaagaaccaaaaggtcagaaatacgaatgtgccaagagatggaatgtacac
tgtgtgaccacacagtggttttttgacagtgttgacaaaggtttttgtcaggacgaatcc
atatacaagacagaacctagaccagaaacaaagactgtgcctgatacttcaactcctact
ggctggatcaacacagttgatagtcgtactctttcagatgtcagccatatttccaacatc
agtgcaagttgcataaatgaatcgatgtgtaattcagttcttaatagtaaagtggagcct
acacttgaaaatctagaaaatctggatgtcagtgcatttcaagcacctgaagatttatta
gatggttgtcggatatatctttgcggttttagtggcagaaagctagataaactgagaagg
cttattaacagtggaggtggagttcgttttaatcagctcaatgaagatgtaactcatgtt
attgtgggagattatgatgatgaattgaagcagttttgggataaatcggcccacaggcct
catgcagtgggagcaaagtggttgctagagtgttttagtaaaggttatatgcttcctgaa
gagccgtatatccatgctaactaccagccagtggaaattccagtttcagatcaacctgaa
agtaaaacagctcttttaaaaaagaacaacagcttctctaagaaagacttggcttctgat
gaaaagcatgaacaagctgacgaagatctgctctctcagtatgtaaataataacccaaca
gtagttgaagctgtgaagtctgaagttgagccctttaatgactctactcatatttctctg
caagaagaaaaccagtcttctgtcactcgttgcctccctgacgcttctacaattactgaa
gaaggtttatttagccaaaagagtttccttgttttggggtttagtaatgaaaatgaatct
aatattgcaaatatcataagagaaaatgctggaaaaatcgtgtcccttcagagcagaatt
gttgctgattatgctgtggttcctctgctggggtgtgaagtagaagcaactgtgggagaa
gttgtcacaaatacgtggctggtaacttgtatagactatcagactttaattgatccaaag
tcaaatcctctcttcatgccagtcccagtaatggcaggaatgactcctttagagggttgt
gttatttcgttcagccagtgtgcaggagcagaaaaagattcattgacgttcttagcaaat
cgccttggagcaagcgttcaagaattctttgttcgcaaatccaatgcaaagaaaggcatg
tttgccagtacacatcttgtattgaaagaaccaggtggatctaaatatgaagctgccaag
aagtggaatttaccagcagtcaccacatcttggttgttggagactgctagaatgggaaag
agagcaaatgaaagccattttctgattgaaaagtcaactaaagaagaacaaagtttggaa
actgaaataacaaacagggtgaatctaaatccagatactccggagcatcctgttgcacaa
ctggaaactcacaggaaaacagctgttacacctttagatatgaaccgctttcagagtaaa
gctttccgtgctgtgatctcacaacacaccagacaggtttcagtctccccaccagtggga
cagcgacttcagaaggagccctccttacatctggatacaccatcaaaatttctgtccaag
gacaaactcttcaaaccttcctttgatgtgaaggatgcacttgcagccttggaaactcca
ggaggtcctagccagcagaaaaggaaactgagtacgccactttcagaagtcattgtcaga
aacttgaaacttgctttggcaaacagctctcgaaatgctgttgctctgtctgccagccct
ccgctggaggatgcccaatcggagaaggaagaagcccccaagccacttcacaaggtagtg
gtatgtgtgagtaagaaactcagtaagaagcagggtgaactgaatgggattgcagcgtct
ctgggagcagattacagatggagttttgatgaaacggtgactcatttcatttatcaaggc
cgaccaaatgacactaaccgagagtataaatctgtaaaagaaagaggagtacacattgtt
tcagaacactggcttttagaatgtgcgcaagagtataaacatcttcctgaatctctttat
ccacatacttacaatcccaaaatgagcttggatatcagtacagtgcaagatggcagactc
tctaatagtcgactactctcagcagattcgacaacaaaggatgatgagccaaatcatttg
cctatagaagaaaacgatatagacagtataaccaccggtaataaagaatcagcaacatca
aatggagatggaaggaatgactctaaaggagctctgacacagaccttggagatgagagaa
aactttcaaaagcagctgcaggagataatgtctgcaacatcaatagtgaaaccccaagga
cagagggcttccctttcaagaagtggttgtaacagtgcttcttcaacccctgatagcact
cgctctgcccgcagtgggcgaagtagagtcctggaggcactgaggcagtcgcgtcaaata
gtacctgatgtcaacacagagccctcccagaatgaacagatcatttgggatgacccgaca
gccagggaggagagagcaaggcttgccagcaatctgcagtggccaagttgtcccacacag
tattctgagcttcaggttgaccttaaaaaattggaggattctccttcccaggagccttta
catgattcagaaattgctaaacaggctgtctgtgatcccgaaaacgtgtgtgtgactgaa
gccccaaaacacccgatctctgaagaactggaaacaccggtaaaagacagccacctgatc
cctacacctcaagcccccagtattgccttccccctagccaacccaccagtggctccacac
cctagagaaaagattataacaatagaggaaacacatgaagacttaaaaaaacagtatata
ttccagttgtcatctctgaatcctcaagaacgtattgattattgtcatctgattgaaaaa
ctaggtggattagtaatagagaaacagtgctttgatcccacttgtacacacattgttgtg
ggacatccacttcgaaacgagaagtatttagcctcagtggcagctgggaaatgggtgctt
catcgctcctacctggaagcatgccggactgctggacacttcgtgctggaagaagactat
gaatggggaagtagttccatactcgatgttttgactggaatcaatgttcagcaacgaaga
ctagcacttgcagcaatgagatggaggaaaaaactccagcaaagacaagaatcgggcatt
gttgagggggcatttagtgggtggaaagttatcttatatgttgaccaatcccgagaagca
ggattcaaacgccttcttcagtcaggaggagcaaaggtactacctggccattctgtacct
ttatttaaagaagccacacatctcttttctgacttcaataaactgaaaccagatgactca
ggggttaatatagcagaagctgccgcccaaaatgtgtactgcttgaaaacagagtacatt
gctgattatctgatgcaggaatcccctcctcaagtagaaaattactgtctaccagaagcg
atttcatttcttccgaataataaggaacctgggcctggattatcacagaagaggaaagct
cctacagagaaaaataaaatcaaacgacctagagtaaactaa
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