Odobenus rosmarus divergens (Pacific walrus): 101379585
Help
Entry
101379585 CDS
T05148
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101379585 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oro03021
]
101379585 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
oro03019
]
101379585 (SUPT5H)
Transcription machinery [BR:
oro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101379585 (SUPT5H)
RNA polymerase I system
101379585 (SUPT5H)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
101379585 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
101379585
NCBI-ProteinID:
XP_004396435
UniProt:
A0A2U3VN01
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSVAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagtgaggacagcaacttctccgaggaggaggatagcgagcgcagcagtgac
ggcgaggaggccgaggtggaggaagagcggcggagtgtagcaggcagtgagaaggaggaa
gagcctgaggaagaagaggaggaggaagaggaggaagaatatgacgaggaagaggaagag
gaagatgatgaccggcctcccaagaaaccccgccatggcggcttcattctggacgaggct
gatgtggacgatgagtatgaagacgaggaccagtgggaagatggggcagaggacattctg
gagaaagaagagatcgaagcctccaatatcgataacgttgtcctggatgaagaccgttct
ggggctcgccgcctacaaaacctctggagggaccagcgagaggaagaactgggcgagtat
tacatgaagaaatatgccaagtcgtctgtgggagagacggtgtatggaggatccgatgag
ctctcggatgacatcacccagcagcagctgctcccaggagtcaaggatccaaatctgtgg
actgtcaaatgtaagatcggggaggaacgggccacagccatttccttgatgcgcaagttc
atcgcctaccagttcacagacacgcccctgcagattaagtcagtggtggcgccggagcac
gtgaagggctacatctatgtggaggcctacaagcagacgcacgtgaagcaggccatcgag
ggtgtgggcaacctgcggcttggctactggaaccagcagatggtgcccatcaaggagatg
acagatgtgcttaaagtcgtgaaggaggtggccaacctgaagcccaaatcctgggtccgc
ctcaagaggggcatctataaggacgacatcgcccaggtggattatgtggaacccagccaa
aacaccatctccttgaagatgatcccccgcattgactatgaccgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccacagaggctgttc
gacgctgagaagatcaggtccctgggcggtgatgtggcctccgatggtgacttcctcatc
ttcgaggggaaccgttacagccggaagggctttctgttcaagagctttgccatgtctgct
gtgatcacggagggtgtgaagcccacgctctctgagctggagaagtttgaggatcagccg
gagggcattgaccttgaggtggtgactgagagcacagggaaggagcgagagcacaacttc
caacctggggacaatgtggaggtgtgtgagggcgagctcatcaacctgcagggcaaaatc
ctcagcgtggatggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctggagttcccggcccaggaacttcggaagtactttaaaatgggggaccacgtgaaggtg
attgctggccgatttgagggtgacacaggcctcattgtgcgggtggaggagaacttcgtc
atcctcttctctgatctcaccatgcatgagctgaaggtgctcccccgggacctgcagctc
tgctcagagacggcatcgggcgtggatgtagggggccagcatgagtggggggagctggtg
cagctggaccctcagaccgtgggtgtcatcgtgcgactggagcgggagaccttccaggtg
ctgaacatgtatgggaaggtggtgaccgtcaggcaccaggctgtgacccggaagaaggac
aaccgctttgccgtggccctggactcggaacagaataacatccatgtgaaggacatcgtc
aaggtcattgacggcccccactcaggccgggagggcgaaattcgccatctcttccgcagc
tttgccttcctgcactgcaagaaactggtggagaatgggggcatgtttgtctgcaagacc
cgccacctcgtcctggcagggggctccaagccccgagatgtgaccaacttcacagtgggt
ggctttgcccccatgagcccccggatcagcagtcccatgcaccccagtgctggaggtcag
cgcggtggctttggcagccccggtggtggcagcggaggtatgagcaggggccgggggcgg
agagacaacgagctcatcggccagactgtgcgcatctcccaagggccctacaaaggctac
attggtgtggtgaaggatgccaccgagtccacagcccgcgtggagctgcactccacctgc
cagaccatctctgtggaccgacagcggctcacgacggtgggctcacggcgcccgggaggc
atgacctcaacctatgggcggacgcccatgtacggctcccagacgcccatgtatggctct
ggttcccgcacacccatgtatggctctcagacccctctccaggatggaagccgcaccccg
cattacggttcacagacacccctgcatgatggcagccgcactcctgctcagagtggggct
tgggaccccaacaatcccaacacgccatcccgggccgaggaagaatacgagtatgccttc
gacgacgagcccaccccgtccccacaggcctatgggggcacccccaatccccaaacacct
ggctatcctgacccctcatccccacaggtcaaccctcagtataacccacagacgccaggg
acaccagccatgtacaacacagaccagttctccccctatgccgccccctctccgcaaggc
tcctaccagcccagccccagcccccagagctaccaccaggtggcgccaagcccagcaggc
taccagaatacccactctccagccagctaccaccccacaccctcacccatggcctatcag
gccagccccagcccgagccctgttggctacagtccgatgacacctggagccccctcccct
ggtggctacaacccgcacacgccaggctcaggcattgagcagaactccagcgactgggta
accactgacatccaggtgaaggtgcgggacacctacctggatacgcaggtggtggggcag
acaggagtcatccgcagcgtcacaggaggcatgtgctctgtgtacctaaaggacagtgag
aaggtggtcagcatctccagcgagcacctggagcccatcacccccaccaagaacaacaag
gtgaaggtgattctgggtgaggatcgggaagccacaggggtcctgttgagcatcgatggt
gaggacggcatcgtccgcatggaccttgatgagcagctcaagatcctcaacctccgcttc
ctggggaagctcctggaagcctga
DBGET
integrated database retrieval system
