Odobenus rosmarus divergens (Pacific walrus): 101379944
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Entry
101379944 CDS
T05148
Symbol
SOX1
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oro03000
]
101379944 (SOX1)
Transcription factors [BR:
oro03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101379944 (SOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
101379944
NCBI-ProteinID:
XP_004409650
UniProt:
A0A2U3WL47
LinkDB
All DBs
Position
Unknown
AA seq
370 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGVAKANQDRVKRPMNAFMVW
SRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDYKYR
PRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAGGGY
AHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHAHPH
NPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYAAAAAAAASSGALGALGSLVKSE
PSGSPPAPAHSRAPCPGDLREMISMYLPAGESGDPAAAAAAAAQSRLHSLPQHYQGAGAG
VNGTVPLTHI
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcctggcggcgcccaggcccccacg
aacctgtcgggcccggccggggcgggcggcggcgggggcggcggcggcggcggcggcggt
ggggtcgccaaggccaaccaggaccgggtcaagcggcccatgaacgccttcatggtgtgg
tcccgtgggcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggagatc
agcaagcgcctgggcgccgagtggaaggtcatgtccgaggccgagaagcggccgttcatc
gacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattacaagtaccgg
ccgcgccgcaagaccaagacgctgctcaagaaggacaagtactcgctggccggcgggctg
ctggcggccggcgcgggcggcggcggcgcggccgtggccatgggcgtgggcgtgggtgtg
ggcgcggcggccgtgggccagcgcctcgagagcccgggcggcgcggcgggcggcggctac
gcgcacgtcaacggctgggccaacggcgcctaccccggctcggtggcggcggcggcagcg
gccgcggccatgatgcaggaggcgcagctggcctacgggcagcacccgggcgcgggcggc
gcgcacccgcacgcgcacccggcgcacccgcacccgcaccacccgcacgcgcatccgcac
aacccgcagcccatgcaccgctacgacatgggcgcgctgcaatacagccccatctccaac
tcgcagggctacatgagcgcctcgccctcgggctacggcggcctcccctacgcggcggcg
gcggcggcggccgcgtcgtcgggcgccctgggcgcgctgggctctctcgtcaagtctgag
ccgagcggcagccctcccgccccggcgcactcgcgggcgccgtgccccggggacctgcgc
gaaatgatcagcatgtacttgcccgccggcgagagcggcgacccggcggcagccgcagca
gcggcggcgcagagccggctgcactcgctgccgcagcactaccagggcgcgggcgcgggc
gtcaacggcacggtgcccctgacgcacatttag
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