Odobenus rosmarus divergens (Pacific walrus): 101380093
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Entry
101380093 CDS
T05148
Symbol
THOC5
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03013
Nucleocytoplasmic transport
oro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101380093 (THOC5)
09122 Translation
03013 Nucleocytoplasmic transport
101380093 (THOC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oro03019
]
101380093 (THOC5)
03041 Spliceosome [BR:
oro03041
]
101380093 (THOC5)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101380093 (THOC5)
Spliceosome [BR:
oro03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101380093 (THOC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
101380093
NCBI-ProteinID:
XP_012417695
LinkDB
All DBs
Position
Unknown
AA seq
694 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPAEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACAHMKSSQPPRQDKTLSVA
IEGSVDEAKALFKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVM
LDLKCKDDSVLHLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDH
GKKTPNPANQYQFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSA
SHMETTMKLLKTRVQSRLALHKQFASLEHGIVPVTNDCQCLFPAKVVSRLVKWVTIAHED
YMELHFTKDIVEAGLAEDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGE
KTNSNDDNIRAMESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETDSHDDSVEGP
KEFPQEKMCLRLFRGPSRMKPFKYNHPQGFFSHR
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcaagcaaaaaacggaagcccaaagtgatccgaagtgatggagctcca
gctgaagggaagcgtaaccgttctgacacagagcaggaaggtaaatactacagtgaggag
gctgaagtggacctgcgggaccctgggagagactatgaactgtacaagtacacatgccag
gagctacagaggctcatggctgagatccaggacctgaagagcagaggaggcaaggatgtg
gcagttgagatagaagatcggaggatccagagctgtgtgcatttcatgactctaaagaag
cttaatcgattagcccacatcaggttgaagaaaggaagagatcagacccatgaggccaag
cagaaagtagatgcctatcacctgcagctgcagaacctgttgtatgaggtgatgcacctg
cagaaagagatcaccaaatgtctggagtttaagtcaaagcatgaagaaattgatttagtc
agtttagaggaattttataaggaggctccaccagatattagcaaggctgaagtcaccatg
ggagacccccaccagcaaacccttgcacgtctggattgggagctggaacagcggaaaagg
ctggcagagaagtaccgggagtgcctgtccaacaaggaaaagatccttaaggagattgag
gtgaagaaggagtacctaagcagcctccagcctcgcctcaatagcatcatgcaggcttcc
ctccccgtgcaagagtacctgttcatgccgttcgaccaggctcacaagcaatatgagaca
gctagacacctgccacctcccctgtatgtcctctttgtccaagccactgcatatgggcag
gcctgtgctcatatgaaatcctcccagccccctagacaggataagaccttgtctgtggca
attgaaggcagtgtggacgaagccaaggctctgtttaagcctcctgaagactcccaagat
gatgagagtgactcggatgctgaggaggaacagaccacgaaacgccggcgacccacactg
ggagttcagttggatgacaaacgcaaggagatgctgaagaggcacccgctgtctgtcatg
ctggacctgaagtgcaaagatgacagcgtgcttcacctgactttctactacctcatgaac
ctcaacatcatgacggtaaaagccaaagtgacgactgccacggagctgatcacccccatc
agtgcaggtgacttgctgtctcctgactcagtcctgagctgtttgtatccaggggaccac
ggaaagaaaactccaaatccagccaatcagtatcagtttgataaagttggcatcctgact
ttgagagactacgtacttgacctaggtcacccctatttgtgggtacaaaagctgggtggt
ctccacttccccaaagagcagccccagcacacggtgattgctgaccactcactgagcgcc
agccacatggagaccaccatgaaactgctgaagaccagggtgcagtcccgcctggccctt
cataaacagtttgcatccctagaacatggcattgtaccagttaccaatgattgccagtgc
ctcttccctgcaaaggttgtctcccgcctggtgaagtgggtgacaattgcccatgaggat
tacatggagctgcatttcaccaaggacattgtggaggcgggactggctgaggacaccaat
ctctactacatggcactcgtggaaaggggcacagccaaactccaggctgctgtggtgctg
aaccctggatactcctccatcccacccattttccagctctgtctgaactggaaaggggag
aaaaccaatagcaatgacgacaacattcgggccatggagagtgaggtcaacgtgtgctac
aaggagctgtgcggcccccggcccagccatcagctcttgaccaaccagctgcagcgcctg
tgtgtgctgctggatgtctacctggagactgacagccatgacgacagcgtggaggggccc
aaggagtttccccaggagaagatgtgtctgcggcttttcaggggtcccagcaggatgaag
ccatttaaatataaccatcctcaaggattcttcagccatcgctga
DBGET
integrated database retrieval system
