Odobenus rosmarus divergens (Pacific walrus): 101380229
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Entry
101380229 CDS
T05148
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101380229 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oro03041
]
101380229 (DHX8)
Enzymes [BR:
oro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101380229 (DHX8)
Spliceosome [BR:
oro03041
]
Complex C
Other components
Step II factors
101380229 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
T2SSE
AAA_16
Sigma54_activ_2
PhoH
TsaE
nSTAND_NTPase5
OB_RRP5_4th
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101380229
NCBI-ProteinID:
XP_004407353
UniProt:
A0A2U3WFE8
LinkDB
All DBs
Position
Unknown
AA seq
1220 aa
AA seq
DB search
MAVVVALAGAVTTADLGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTGKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQKDAEHRDKTKKKKRSRSR
DRDRERDRERDRDRDRDHKRRHRSRSRSRSRTRERNKGKSRYRSRSRSQSPPKDRKNRDK
YGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISEL
RREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGETNE
ETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFPDFD
EETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAMMQS
ALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPEWKK
HAFGGNKASYGKKTQMSIIEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQ
YLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETVIKY
MTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATL
DAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDILVFL
TGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATN
IAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCY
RLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQ
LYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYR
PKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRK
QMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSA
LFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEP
LYNRYEEPNAWRISRAFRRR
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggttgtggccctggcgggagccgtaaccaccgcagacctaggccccgcggaa
gaactcgccaaactcgagtatctgtctttagtgtcgaaagtttgcaccgagctggacaat
cacctggggatcaacgacaaggatctggctgaatttgtgatcagtcttgctgagaaaaat
accacctttgatacttttaaggcttctctggtcaaaaatggtgccgaattcacggattct
cttattagtaacttgctgcgcctcatacaaaccatgcggcctccagcaaagccttctact
agcaaagatccagttgttaaacccaaaaccggaaaagaaaagctgaaggaactcttccca
gtcctttgccagccagacaacccttctgtccggaccatgctggatgaggatgatgtgaaa
gtcgctgtggatgtcctgaaggaactggaggccttgatgcccagtgcagcgggccaggag
aagcagaaagatgctgagcaccgggacaagacgaagaagaagaagcggagccggagccgc
gaccgggaccgagaacgtgaccgagagcgagaccgagaccgtgatagagaccacaagagg
agacaccggtcccgctcccggtcacgttccaggacccgggagaggaataaagggaagtct
aggtatcggtcaaggagcagaagtcagagtccccccaaagacaggaagaaccgggacaag
tatggggagaggaatctggacagatggcgggataagcatgtggaccgccctcccccagaa
gagcctgccatcggagacatttacaatggcaaagttaccagcatcatgcagtttggatgc
tttgtgcagctggagggattaaggaagcggtgggaaggcctggtgcacatctctgagctc
cgtcgagaaggccgtgtggccaatgtggctgatgtggtgagcaaaggccagagggtgaag
gtcaaagtactgtccttcactgggaccaagaccagtctgagcatgaaggatgtggatcaa
gagactggagaagatctaaaccccaatcgacgacgaaatcttgttggggagaccaatgag
gagacctccatgaggaatccggacagacctactcacctctcccttgtcagtgcccctgaa
gtagaggatgattcactggaacgcaagcgccttacccgcatctctgacccggagaagtgg
gagatcaaacagatgattgctgccaatgtcctttccaaagaagagtttccggactttgat
gaagagactggcattctccctaaagtggatgatgaagaagatgaagatcttgagattgaa
ctggttgaggaagagcctccattcctgagagggcacaccaagcaaagcatggacatgagc
cctattaaaattgttaagaacccggatggttccctctcccaagcagcaatgatgcagagt
gccttagccaaagaaaggcgggaactcaagcaggcccagcgggaagcggagatggattct
attcccatggggctcaacaaacactgggttgatcctctgcctgatgcggaaggcaggcag
attgctgccaatatgaggggtattgggatgatgcccaatgacattcccgagtggaagaag
catgcctttgggggcaacaaagcttcttatgggaaaaagacccagatgtcaatcattgag
cagagagagagcctgcccatctacaaactgaaggagcagctggtccaggctgtccatgac
aatcaaatcctgattgttattggagagacaggatctgggaagacaacgcagatcacccag
tacctggcggaggcaggctacacgtcccggggcaagattggatgtacgcagcccagaaga
gtagcagccatgtcggtggccaaaagagtgtcagaggagtttggttgttgcttgggccaa
gaggtgggctacaccattcgatttgaggactgcaccagcccagagacagtgatcaagtac
atgacagacgggatgttgctccgagagtgcctgattgaccctgacctcacacagtatgca
atcatcatgttggatgaggcgcacgagagaaccattcacactgacgtgctcttcggattg
ttgaagaagacggtgcagaaacggcaggacatgaagctgattgtcacctcagccacgctg
gatgcagtgaagttttctcagtacttctatgaagcgcccatcttcaccatcccaggtcga
acatacccagtggaaatactgtacacaaaggaacctgagacagattatctggatgccagc
ttgatcaccgtcatgcagatccacttaacagaaccaccaggtgatatcctggtcttcctg
actggtcaagaggagattgataccgcttgcgagatcctctatgaacgaatgaaatccctg
ggaccggatgttccagagctgatcatcctgccagtgtactctgctcttcccagtgagatg
cagacccgaatctttgaccccgctcctcctggcagcagaaaggtcgtgattgccaccaac
atcgcagaaacctcactgactattgatggcatctactatgtggtggaccctgggtttgtg
aagcagaaagtttacaattccaagaccggcatcgaccagctcgtggtcactccgatttct
caggctcaggcaaagcaacgagctggcagagccgggagaacaggcccagggaagtgttac
aggctgtacaccgaacgtgcctaccgagatgaaatgctgaccaccaacgtgccggaaatc
cagaggaccaacctagcaagcacagtgctctcgctcaaggccatgggcatcaatgacctg
ctgtcctttgacttcatggatgcgccgccaatggaaaccttgatcacagccatggagcag
ctatacaccctgggggccttggatgacgagggcctgctcactcgcctgggccgcaggatg
gcagaattccctctggagccgatgctgtgcaaaatgctgatcatgtccgtgcatctgggc
tgcagcgaggagatgctgaccattgtgtccatgctgtcagtgcagaacgtcttctacagg
cccaaggataaacaagccctcgcagaccagaagaaagccaagttccaccagaccgaaggg
gaccacctcaccctgctggccgtgtacaactcctggaagaacaacaagttctccaacccg
tggtgctatgagaactttatccaggctcgctctctgcgccgggcccaggatattcgcaag
cagatgttaggcataatggacagacacaagctggacgtggtctcctgtggcaagtccacg
gtgcgagtgcagaaggccatctgcagtggattcttccggaacgctgccaagaaagacccg
caggagggctaccggacgctgatcgaccagcaggtggtctacatccacccttccagcgct
ctcttcaacagacagcccgaatgggtggtgtaccacgagctggtgctgaccacgaaagag
tacatgcgtgaggtcaccactatcgacccccggtggcttgtggagtttgccccggccttc
ttcaaggtctccgacccgaccaagctgagcaagcagaagaagcagcagcgcctcgaaccc
ttgtacaatcgctacgaggagcccaacgcctggagaatatcccgggccttccgccggcgc
tga
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integrated database retrieval system
