Odobenus rosmarus divergens (Pacific walrus): 101380308
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Entry
101380308 CDS
T05148
Symbol
ERCC2
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03022
Basal transcription factors
oro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101380308 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
101380308 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oro03021
]
101380308 (ERCC2)
03036 Chromosome and associated proteins [BR:
oro03036
]
101380308 (ERCC2)
03400 DNA repair and recombination proteins [BR:
oro03400
]
101380308 (ERCC2)
Enzymes [BR:
oro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101380308 (ERCC2)
Transcription machinery [BR:
oro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101380308 (ERCC2)
Chromosome and associated proteins [BR:
oro03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101380308 (ERCC2)
DNA repair and recombination proteins [BR:
oro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101380308 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
AAA_22
SesA
Motif
Other DBs
NCBI-GeneID:
101380308
NCBI-ProteinID:
XP_004401036
UniProt:
A0A2U3VZH7
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIMAYQ
RAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNFYEKQEGEKLPFLGLALSSRKNLCIHPE
VMPLRFGKDVDGRCHSLTASYVRAQYQQDPSLPHCRFYEEFDVHGRQVPLSAGIYNLDDL
KALGRRQGWCPYFLARYSILHANVVVYSYHYLLDPKIAELVSKELARKAVVVFDEAHNID
NVCIDSMSVNITRRTLDRCQGNLETLQKTVLRIKETDEQRLREEYRRLVEGLREASAARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSREQLESEETLRRIEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctacttcccttacgactacatctaccccgag
cagttctcgtacatgctggagctcaagcgcacgctggacgccaagggtcatggagtccta
gagatgccctcaggcactgggaagacagtgtccctgttggccctgatcatggcataccag
agggcgtatccactagaagtgactaaactcatctactgctcaaggactgtgcctgagatt
gagaaggtgattgaagagctgcgaaagttgctcaacttctatgagaagcaggagggtgag
aagctaccgtttttggggctggctctgagctcccggaagaacctgtgtattcatcctgag
gtgatgcccctgcgctttgggaaagacgtcgacgggagatgccacagcctcacagcgtcg
tacgtgcgggcgcagtaccagcaggaccccagcctgccccactgccgcttctacgaggag
tttgatgtccatgggcgccaggtgcccctctctgctggcatctacaacctggatgacctc
aaggccctgggacggcgccagggctggtgcccctacttcctcgcccgctattcgatcctg
catgccaacgtggtggtttacagctaccactacctcttggaccccaagattgcagagctg
gtgtctaaggagctggcccgcaaggctgtcgtggtcttcgacgaggcccacaacatcgac
aacgtctgcatcgactccatgagcgtcaatatcacccgccggaccctcgaccgctgccag
ggcaacctggagaccttacagaagacggtgctcaggatcaaggagacagatgagcagcgt
ctgcgggaagagtaccgacgcctggtggaggggctgcgggaggccagtgccgcccgggag
acggacgcccacctggccaaccccgtgcttcctgacgaggtgctacaggaggctgtaccc
ggctccatccgcacggccgagcacttcctgggcttcctgcggcggctgctggagtacgtc
aagtggcggctgcgggtccagcacgtggtgcaggagagcccccctgccttcctcagcggc
ctggcccagcgcgtgtgcatccagcgcaagcccctcagattctgtgccgagcgtctccgc
tccctgctgcacaccctggagatcgctgaccttgccgacttctctcccctcaccctcctg
gctaacttcgccactctcgtcagcacctacgccaagggtttcaccatcatcatcgagccc
tttgatgacaggacccccaccattgccaaccccatcctgcacttcagctgcatggacgcc
tcactggccatcaaacctgtgttcgagcgcttccagtctgtcatcatcacatctgggacg
ctgtccccactggacatctaccccaagattctggacttccaccctgtcaccatggcaacc
ttcaccatgacgctggcccgggtctgcctctgccccatgatcattggtcgtggcaacgac
caggtggccatcagctccaagtttgagacccgggaagatattgcggtgatccggaactat
gggaacctcctgctggagatgtccgccgtggtccctgatggcattgtggctttcttcact
agctaccagtacatggagagcaccgtggcctcctggtacgagcagggcattcttgaaaac
atccagaggaataagctgctcttcattgagacgcaagatggggccgagaccagcgtcgcc
ctggagaagtaccaggaggcctgtgagaatggccgtggagccatcctgctgtccgtggcc
cggggaaaagtgtccgagggaatcgactttgtgcaccattacgggcgcgcagtcatcatg
tttggcgtcccctacgtctacacgcagagccgcatcctcaaggcacggctggagtacctg
cgggaccagttccagatccgagagaatgactttctcaccttcgatgccatgcgccacgcg
gcccagtgtgtgggccgggccatccggggcaagacggactacggcctcatggtctttgcc
gataagaggtttgcccgggcagacaagcgtgggaaactgcctcgctggatccaggagcac
ctcactgacgccaacctcaacctgaccgtggatgagggggtccaggttgccaagtacttc
ctgaggcagatggctcagccattccaccgggaggaccagctgggcctgtccctgctcagc
cgggagcagctggaatccgaggagaccctgcgaaggatagagcagattgctcagcagctg
tag
DBGET
integrated database retrieval system
