Odobenus rosmarus divergens (Pacific walrus): 101380790
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Entry
101380790 CDS
T05148
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oro03036
]
101380790 (HFM1)
Enzymes [BR:
oro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101380790 (HFM1)
Chromosome and associated proteins [BR:
oro03036
]
Eukaryotic type
Meiosis-specific proteins
Others
101380790 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
Helicase_C
ResIII
Hfq
AAA_22
Lipase_2
Motif
Other DBs
NCBI-GeneID:
101380790
NCBI-ProteinID:
XP_012418592
LinkDB
All DBs
Position
Unknown
AA seq
1480 aa
AA seq
DB search
MLKSNDSLFSLDTLVFEKQDEAENYPDNEKSMDWCLPPAPLISEIPDTQALEEEIGSHKL
LGQEERPKMLPSNLKITNENTNYISPTQKFQFAFSSNKYEAGDLNLGGAGNNDLSHVPGK
LMYGSSQKYKNHIGSEIATPDNTKLLNFAEDKGESISAFRKRLFKISDNIHEGVNSNDST
NLDSPIGSVKIAPTEMNKGESWKSSSSKQKHQYSEINMFTASNTFSASEIREDIFKAPTF
SVASQPHEVQGVTENDLDSLKAVTEIPAKFRSIFKEFPYFNYIQSKAFDDLLYTDRNFVI
CAPTGSGKTVVFELAITRLLMEVPLPWSNIKIVYMAPIKALCSQRFDDWKEKFGPIGLNC
KELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTRKWRDNSLVKLVRLFLIDEVHVVKDENR
GPTLEVVVSRMKTVQSLSPTSENSSTVIPMRFVAVSATIPNAEDIAEWLSDGERPAVCLK
MDERHRPVKLRKVVLGFPCRNNQTEFKFDLTLNYKIASVIQTYSDQKPTLVFCATRKGVQ
QAASVLVKDAKFIMAVEQKQRLQKCAYSIRDSKLRDILIHGVAYHHAGMELSDRKVVEGA
FTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYAGGMFEEYSETDILQMIGRAGRPQFD
TTATAVIMTRLSTKEKYIQMLACSDTVESSLHRHLIEHLNAEIVLHTITDVNIALEWIRS
TLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLKNLNDLSSLDLITMDEDVNFKPTEAG
RLMAWYYITFETVKKFCTISGKETLLDLVTMIASCKEFADVQLRINEKKTLNTLNKDPNR
VTIRFPMEGRIKTREMKVNCLIQAQLGCIPIQDFALTQDTSKIFRNGSRITRWLSEFVAV
QEKKFAVLLNSLILAKCFRCKLWENSLHISKQLEKIGITLSNAMVNAGLTSFKKIEETDA
RELELILNRHPPFGTQIKETVMYLPKYELEVEQIARYNDTIAEILVTIILRNFEQLQTKR
TAPDSHYVTLIIGDADNQLVFKHKIMDSILLKAGNWTKKIDVKRAFKSEDLSINLISSEY
VGLDIQQKFTVFYLGPKRLGSQIIMRKKSETEIFHSKHSNRSTVAGPNKGMTACKKPGNR
ECNHHCKNKHTCGHDCCKTGVAQKSEMKEPTISSYLSDLRNRNAVSSLPPVKRLKMQMSK
SQSVDLKEFGFTPKPSLPSISRSECLNIPELSIMEQRDQREICAKVQQEPSEYQDKDFSR
WNYPTTSDEKAPQTVLFNRHLNASGNQNLTDVDKNNAPFSEVLDVNFELGDEVWDDFDDE
NLLEVTSFSASTEKTKTSGFGNTLSSSTRGSKIFLQESKSKFQGEMAKSFVSSPEKPDIY
LPNSPVFKFDASSLKKLPQQAGNANIVHLQERKQQSLSPEIEKLCFTHSEKIPNSSCFVK
KVDFFIRNSECKEEIDFSRYHPDDEADEMKSFLGIFDGIF
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaatcaaatgactccttgttttctttggatactttggtttttgaaaaacaagat
gaagctgaaaactatccagacaatgaaaaatcaatggattggtgtctcccacctgctccg
ttgatttcagaaattccagatactcaggcattagaggaggaaataggaagtcataaactg
ttaggtcaggaagagaggccaaaaatgttaccatcaaatttaaagataactaatgaaaac
acaaattatatttcaccaacacaaaaattccaatttgccttttcctccaataaatatgaa
gcaggtgatctgaatttaggaggagcaggtaacaatgacttatcacatgttcctggcaag
ctgatgtatggttcttctcagaaatacaaaaatcacattggcagtgagatagcaactcca
gataatacaaaattacttaattttgcagaagataaaggagaaagcatatcagccttccga
aaaagattatttaaaatatctgacaatatacatgaaggtgttaattctaatgacagtaca
aacttggactctcctattggctcagtgaaaattgctccaacagaaatgaacaaaggggaa
tcatggaaaagtagcagtagtaagcagaaacatcaatattcagagattaacatgtttaca
gcaagcaatactttttctgcttctgaaatcagagaagacatattcaaagcaccaactttt
tcagttgcatcccagcctcatgaagttcaaggggtaacagaaaatgatttagattccttg
aaggctgtcacagaaatccccgcaaaatttagaagtattttcaaggaattcccatatttc
aactatatacagtccaaagcctttgatgatcttctttacacagataggaattttgtgatt
tgtgctccaactggttctgggaaaactgtagtgtttgaactagctataacaagattatta
atggaagtcccattgccatggtcaaacattaaaattgtttacatggcaccaataaaagcc
ctgtgtagtcagcgttttgatgattggaaagaaaaatttggaccaataggattgaattgt
aaagaactcactggagatacagtaatggatgacctatttgagattcagcatgcccatatt
attatgacaactccagaaaaatgggatagcatgactagaaaatggagagacaactctttg
gtcaagctggttagactctttctcattgatgaggtacatgttgtaaaagatgaaaatcgt
ggaccaactcttgaagttgtagttagcagaatgaaaactgtacagtctttatctcctact
tctgaaaatagcagcacagttattccaatgagatttgtagctgtatctgcgacaattcca
aatgctgaggatattgcagaatggctttcagatggtgaaagacctgctgtatgtctgaaa
atggatgagagacataggccggtgaaacttcggaaagtggtccttggatttccctgcaga
aataaccaaaccgaatttaagtttgatttaaccctcaactacaaaattgccagtgttata
caaacatactctgatcagaaacccacacttgtgttttgtgcaacaaggaaaggtgtacaa
caggctgcttctgttcttgtgaaagatgctaaatttattatggctgtggaacagaaacag
aggttacagaagtgtgcatattccataagagattcaaaactgagagatatcttaatacat
ggtgttgcttatcatcatgctggtatggagctgtcagatagaaaagtagttgaaggagct
ttcactgttggagatctaccagttctttttactaccagtactttagctatgggagtaaat
ttgcctgcccacctagtagttataaaatctacgatgcattatgctggaggaatgtttgaa
gagtatagtgaaacagatattctacagatgattggtagagctggtcgacctcaatttgat
actacagctactgcagttattatgactcggttaagtacaaaagagaagtatattcagatg
ttagcttgtagtgacactgtagaaagcagtttacacagacatcttattgaacatttaaat
gcagagatagtgttacataccatcacagatgtgaatattgctttggaatggatacgatca
actttgctttatatcagagccttgaaaaatccatctcattatggttttgcatctggattg
aacaaagatggaattgaagcaaaattacaagaattatgtttgaagaatctgaatgattta
tcatctctggacttgataacgatggatgaggatgttaatttcaaaccaactgaggcagga
agattgatggcttggtattacattacatttgagacagtgaagaaattttgtaccatcagt
ggaaaagagactttattagatctggtcacaatgatagccagctgcaaggaatttgcagat
gtacagttaaggataaatgaaaagaaaacactgaatactttgaacaaagatccaaatcgg
gtaactatcagatttccaatggaaggaagaattaaaacaagagaaatgaaagtaaattgt
cttattcaggctcagctaggatgcattcccatacaagactttgctttgacacaagatacc
tcgaagattttcagaaatggctcacgaattacaagatggttgtcagaatttgtggctgtt
caagaaaagaagtttgctgtactattgaacagtttgatactagctaaatgttttagatgc
aaactttgggaaaactctctacatatatccaaacagctggaaaagattggtataacattg
tcaaatgcaatggtaaatgcaggtttgacctcctttaaaaaaatagaagaaacagatgca
agggaacttgaactgattttaaatagacaccccccttttggaacgcaaataaaagaaaca
gtgatgtatctaccaaaatatgaacttgaagtggaacagattgcaagatataatgatacc
attgcggaaatattagtgaccattatattaagaaactttgaacagctacaaactaaaaga
acagcaccagattctcactatgttaccttaatcataggtgatgcagataatcagctggtt
tttaagcacaaaataatggattctattttgctaaaagctggaaattggactaaaaagatt
gatgtgaagagagcttttaaatctgaagatcttagcataaatctaattagttctgaatat
gttggacttgatattcagcagaaatttacagtcttttacttaggacccaagaggcttgga
agtcaaataattatgcgaaaaaaatcagaaacagagattttccattctaaacattcaaat
agatctacggtagcaggacccaataaaggaatgactgcttgcaaaaaacctgggaaccga
gaatgtaatcatcactgtaaaaataaacatacatgtggacatgactgctgtaaaactgga
gttgcacaaaagtcagaaatgaaagagccaacaatttcttcatatttatccgatttaaga
aacaggaatgctgtttcatcacttcctccagttaaacgtctcaagatgcaaatgagtaaa
tctcaaagtgtggaccttaaagaatttggttttactccaaaaccttctcttcccagtata
tcaaggtcagagtgtttaaacatacctgaattgtctataatggagcagagggatcagcgt
gaaatctgtgcaaaagttcaacaagaaccatcagaatatcaagacaaagatttctctaga
tggaactatcctacaacttcagatgagaaagcccctcaaacagtgctattcaacagacat
cttaatgcatctggaaaccagaatttgacagatgtggataaaaataatgctccattctca
gaagttttggatgtgaactttgaattgggagatgaagtttgggatgattttgatgatgag
aacttattagaagttaccagtttttcagccagtactgagaagacaaaaacatcaggattt
ggaaacactttgagttcaagtaccaggggaagtaagatattcctccaagagtcaaaaagc
aaattccaaggagaaatggcaaaaagttttgtttcatcacctgagaagccagatatttac
ttaccaaattctcctgtgttcaagtttgatgcctcttccttgaaaaaattacctcaacaa
gctggaaatgcaaatattgttcatttacaagaaagaaaacaacaaagtctgtcaccagaa
attgaaaagctgtgctttactcactctgaaaaaataccaaattcttcatgttttgttaag
aaagtggatttctttattagaaacagtgaatgtaaagaggaaattgatttcagtaggtat
catcctgatgatgaagctgatgaaatgaaatcttttctgggaatatttgatggtattttc
taa
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