Odobenus rosmarus divergens (Pacific walrus): 101380849
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Entry
101380849 CDS
T05148
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A isoform X2
KO
K12821
pre-mRNA-processing factor 40
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101380849 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oro03041
]
101380849 (PRPF40A)
Spliceosome [BR:
oro03041
]
Complex A
U1 snRNP components
U1 related factors
101380849 (PRPF40A)
Complex B
101380849 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
FF_RHG35_4th
WW_2
Motif
Other DBs
NCBI-GeneID:
101380849
NCBI-ProteinID:
XP_004394854
UniProt:
A0A2U3VJC7
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MRPGTGAERGGLMVSEMESHPPSRGPGDGERRLSGSSLCSSSWVSADGFLRRRPSMGHPG
MHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMPGMMSSVMPGMMMSHMSQAS
MQPALPPGVNNMDVAAGTTSGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQ
LLSKCPWKEYKSDSGKPYYYNSQTKESRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMI
KAEESSKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASAST
SASNTVGGTGAVVPEPEVTSIVATVVDNENTVTISTEEQTQLTSTPAVQEQSMEVSSNTG
EETAKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMK
MIINDPRYSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTST
TRYKKAEQMFGEMEVWNAISERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDN
MANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSL
LRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDL
FKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLA
FNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAF
EDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSH
SKKKRQRSESRSASEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKD
RESEKDRTRQRSESKHKSPKKKTGKDSGNWDTSGSELSEGELEKRRRTLLEQLDDDQ
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggggacgggagcggagcgtggaggcctcatggtgagtgaaatggagagccat
cctccttcgcggggtcccggggacggggagcggagattgtccggctcaagcctctgctcc
agctcttgggtctctgctgacggcttcctgaggagacggccctcgatggggcaccctggc
atgcattatgccccaatgggaatgcaccctatgggtcagagagcgaatatgcctcctgta
cctcatggaatgatgccgcaaatgatgccccctatgggagggccgccaatgggacaaatg
cctggaatgatgtcttcagtaatgcctggaatgatgatgtctcatatgtctcaggcttcc
atgcagcctgccttaccgccaggagtaaataatatggatgtagcagcaggtacaacatct
ggtgcaaaatcaatgtggaccgagcataagtcacctgatggaaggacttactactacaat
actgaaacaaaacagtctacttgggagaaaccagatgatctgaaaacacctgctgagcaa
cttttatctaaatgtccctggaaggaatacaaatctgactctggaaagccttactattat
aattctcaaacaaaagaatcccgctgggccaaacctaaagaacttgaggatcttgaagga
taccagaataccattgttgctggaagtcttattacaaaatcaaacctgcatgcaatgatc
aaagctgaagaaagcagtaagcaagaagagtgcaccacaacatcaacagccccggttcct
acaacagaaattccgaccaccatgagcaccatggctgctgcggaagctgctgctgctgtc
gttgccgccgccgccgccgctgccgccgccgccgccgccgccaatgccagtgcttccacc
tctgcttcaaatactgtcggtggaactggtgcagtcgttcctgagccagaagttacttcg
attgttgctaccgttgtagataatgagaatacagtgacaatttcaactgaagaacaaaca
cagcttactagtactcctgctgttcaggaacagagtatggaagtatccagtaatactgga
gaagaaacagctaagcaggaaactgtagctgattttactcccaaaaaagaagaggaggaa
agccaaccagcaaagaaaacctatacttggaatacaaaggaagaggcaaagcaagcattt
aaagaattattgaaagaaaagcgggtaccatctaatgcttcatgggaacaagctatgaaa
atgatcattaatgatccacgatacagtgctttagcaaagttgagtgaaaaaaagcaagcc
tttaatgcttacaaagtccagacagagaaagaagaaaaagaagaagcacgatcaaaatac
aaagaggctaaggaatcctttcagcgttttcttgaaaatcatgagaaaatgacttccaca
accagatacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgcaatatca
gaacgtgatcgtcttgaaatctatgaagatgttttattctttctttcaaaaaaagaaaag
gagcaagcaaagcagttacggaagagaaattgggaagccttaaaaaacatacttgacaac
atggctaatgtaacatactctactacctggtctgaagcccagcagtatctgatggataat
ccaacttttgcagaagatgaggaattacagaacatggataaagaagatgcattaatttgc
tttgaagaacacatccgagctttagaaaaggaagaagaagaagaaaaacagaagagtttg
ctgagagaaaggagacgacagcgtaaaaatagagaatcttttcagatatttttagatgaa
ctgcacgaacatggacaactgcattctatgtcatcttggatggaattgtatccaacaatt
agttccgacattagatttactaatatgcttggtcaaccgggatcaactgcacttgacctt
ttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaaaataataaaa
gacattctaaaggataaaggatttgtagttgaagtaaatacgactttcgaagactttgtg
gccataatcagttcaactaaaaggtcaaccacgttagatgccggaaatattaagttggct
ttcaacagtttactagaaaaggcagaagctcgtgaacgcgaacgagaaaaagaggaggct
cgaaaaatgaaacgaaaagaatctgcatttaagagtatgttgaaacaagctactcctcca
atagaattggatgctgtctgggaagatatccgggagagatttgtaaaagagccagcattt
gaggacataactctagagtctgaaagaaaacgaatatttaaagattttatgcatgtgctt
gagcatgaatgtcaacatcatcattcaaagaacaagaaacattctaaaaaatctaaaaaa
catcacaggaaacgttcccgctctagatcgggatcagattcagatgatgacgacagccat
tcaaagaaaaaaagacagcgatcagagtctcggtctgcctcagaacattcttctagtgct
gagtctgagagaagttataagaagtcaaaaaaacataagaagaaaagcaagaagaggaga
cataaatctgactctccagagtcagatgctgagcgagagaaggataaaaaagaaaaagac
cgagaaagtgaaaaagacagaactagacaaagatcagaatcaaaacacaaatcacctaag
aaaaagactggaaaggattctgggaattgggatacttctggcagtgaactgagtgaaggg
gaattggaaaagcgcagaaggacccttttggagcaactggatgatgatcaataa
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