Odobenus rosmarus divergens (Pacific walrus): 101381103
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Entry
101381103 CDS
T05148
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04151
PI3K-Akt signaling pathway
oro04510
Focal adhesion
oro04512
ECM-receptor interaction
oro04820
Cytoskeleton in muscle cells
oro04926
Relaxin signaling pathway
oro04933
AGE-RAGE signaling pathway in diabetic complications
oro04974
Protein digestion and absorption
oro05146
Amoebiasis
oro05165
Human papillomavirus infection
oro05200
Pathways in cancer
oro05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101381103 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101381103 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101381103 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101381103 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
101381103 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
101381103 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101381103 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
101381103 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
101381103 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
101381103 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
101381103 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oro04147
]
101381103 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
oro00536
]
101381103 (COL4A2)
Exosome [BR:
oro04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
101381103 (COL4A2)
Glycosaminoglycan binding proteins [BR:
oro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101381103 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
101381103
NCBI-ProteinID:
XP_012421071
LinkDB
All DBs
Position
Unknown
AA seq
1762 aa
AA seq
DB search
MSLPVASPDSRPPAPRSLVRACRAHLPAGCSPMSLGLPRRGLGPCASKPGLRLGAWTPGP
GRPGGLHQRTTFGITRSLCFLVQGVKKFDVPCGGRDCSGGCQCYPEKGGRGQPGPVGPQG
YTGPPGLQGFPGLQGRKGDKGERGSPGTIGPKGDVGARGVSGFPGADGIPGHPGQGGPRG
PPGYDGCNGTRGDVGRQGPVGPEGFLGPPGPQGPKGEKGEPYALSSVDRDRYRGEPGDPG
LVGFQGPPGRPGPIGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKGEKGDMGLPGP
NGIPSDTHHAIIGPMKEMFHPDQYKGERGSDGEPGVKGISLKGEEGVMGFPGPRGAAGFD
GEKGSPGQKGSRGLDGYQGPDGPPGPKGEAGDRGRPGAPAYFPHPSLIKGARGDPGFPGT
HGEPGSRGEPGDPGPPGLPGTSVRDEDGKRGLPGEMGPKGFIGDPGIPALYPGPPGTDGR
PGLPGPPGPAGPPGPDGFLFGLKGTEGKVGYPGPSGFPGARGQKGWKGDTGDCKCAESDQ
FIGGLPGLPGPKGFPGVSGEPGKKGSQGDPGQHGIPGFPGFKGAPGNVGPPGPKGVKGDS
RAVTTKGERGQPGVPGVPGLKGDDGVPGRDGLDGFPGLPGAPGDGIKGPPGDSGYPGVPG
TKGVPGERGSPGLGLPGPKGERGFPGDAGLPGPPGFPGPPGPPGTPGQIDCDTGVKRPIG
GDGQEAVQPDCVGGPKGSPGLPGPPGLTGAKGLQGIPGLSGADGAPGLKGLPGDPGREGF
PGPPGFVGPRGSKGAAGLPGADGLSGPTGLPGPIGPPGDRGLPGEVLGAQPGPRGDAGLP
GQPGLKGPPGERGPPGFRGSQGMPGMPGLKGQPGFLGPSGQPGLPGPPGQHGFPGAPGRE
GPLGLPGAPGHGGLPGDRGDPGDTGVPGPVGMKGLFGDRGDPGLLGERGPPGSPGFKGMS
GMPGIPGQKGGRGSPGMDGFQGMVGLKGRPGFPGNKGEAGFFGIPGLKGLAGEPGVKGSR
GDPGPPGPPPIILPGMKDIKGEKGDEGPMGLKGYLGLKGVPGMPGIPGLSGVPGLPGRPG
HIKGVKGDIGVPGVPGSPGFPGVPGPPGIIGFPGFTGSRGDKGAPGRAGLYGEVGPTGDF
GDIGDTIDLPGSPGLKGERGVTGAPGLKGFFGERGTVGEVGFPGITGVPGVQGPPGPKGQ
TGFPGLTGLQGPQGEPGRVGLPGDKGDHGWPGIPGLPGFPGIRGISGLHGLPGTKGFPGS
PGADIHGDPGFPGPTGDRGDPGEPNTRPGPFGAPGQKGERGDPGERGPVGSPGLQGFPGI
TPPSNMSGLPGDKGAPGIFGLEGYRGPPGPPGPAALPGSKGDVGNPGAPGNPGTKGWGGD
PGAQGRPGVLGLPGEKGPRGEPGFMGNTGATGSVGDRGPKGPKGGRGLPGAPGSVGSPGI
AGIPQKIAIQPGPVGPQGRRGPPGAQGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAIPG
FRGDQGPTGQQGPVGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTAQEPQCPVGMSK
LWSGYSLLYLEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYFASRNDKSYWLSTT
APLPMMPVAEDDIRPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTA
AGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTAIPEQTFQGAPSA
DTLKAGLVRTHISRCQVCMKNL
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcctgtggcatcccctgacagccgacccccagccccacggtccctggtgcgc
gcctgccgggcgcacctgcccgccggctgctcacccatgtccctgggccttccccggcga
ggtctggggccctgtgccagcaagcccggcctgcgcctgggggcatggacccctgggcct
ggacggcctggaggactccatcagaggacaacgtttgggataacacgttctttgtgcttc
cttgtgcagggcgtgaagaagttcgacgtgccctgtggagggagagactgcagcgggggc
tgccagtgttaccccgagaaggggggacggggccagcccgggccagtgggcccccagggg
tacaccgggcccccaggcctgcaggggttcccaggactacagggccgcaaaggtgacaag
ggcgagcggggctcccccgggaccatcggaccgaaaggagatgtgggagcgagaggtgtt
tctggattccctggcgccgacggaattcccggacaccccgggcaaggtgggcccagagga
ccgcccggttatgacggctgcaacggaaccagaggagacgtaggccggcagggacccgtt
ggccccgaggggttcctcggccctcccgggccccaaggacccaaaggagagaaaggcgag
ccatatgcgctatccagtgtggaccgcgacagatacaggggtgaacccggagatcctggc
ttggttggtttccagggcccccctggccgtcctgggcctataggacagatgggtccggtt
ggagctccgggaagaccaggcccgcctggaccccctggaccaaaagggcagccaggcaac
agaggacttggcttttatggagaaaagggtgaaaagggcgacatgggactgccgggaccc
aatgggattccatcggacacccaccatgccatcatcggacccatgaaggaaatgttccac
ccagatcaatataagggtgaaagggggagtgatggggagccgggagtaaaaggcatatcc
ttgaagggagaagaaggagtcatgggttttccgggcccacggggtgctgctggcttcgat
ggtgaaaaaggttctccgggacaaaaagggagcagaggactggatggttatcaaggcccc
gacgggcccccaggacccaagggagaagcgggtgaccgcggccgcccaggtgcacctgct
tacttccctcacccctccctaattaaaggtgccagaggcgacccaggattcccagggacc
catggggagcccggaagccgaggtgaaccaggagacccgggcccacccggcctccccggc
acgtctgtcagagatgaagatgggaagagaggtttaccgggtgaaatgggccccaaaggc
ttcataggagacccaggcatccctgcactgtaccccggcccaccgggcactgatggaagg
ccaggactcccaggacccccagggcctgccggaccaccgggaccagacggtttccttttc
ggccttaaaggaacagaagggaaggtgggctaccctgggccttctggcttccctggggct
cgcggacagaaagggtggaaaggtgacactggggactgtaagtgcgcagagagtgatcag
ttcatcggggggctcccggggctgccaggccccaagggctttcccggcgtcagtggagag
ccagggaagaaagggagccaaggagaccccggccagcacggcatccctgggtttcccggg
ttcaagggcgcccctggcaacgttggacctcccgggcccaaaggggtgaagggggattcc
agagcggtcaccaccaaaggtgagagggggcagccaggtgtcccgggtgtgccggggctg
aaaggtgacgacggtgtccctggccgcgatgggctggatggattcccaggcctcccgggc
gctccgggtgatggcatcaaaggccccccaggggactcaggttacccgggagtacctggc
actaagggcgttccaggagagaggggctccccgggactgggcctgcccggccccaaaggc
gagcgtggtttccccggagatgccggattacctggaccaccaggctttcccggtcccccc
ggccccccaggcactcccggacaaatagactgtgacacaggtgtgaaaaggcccatcgga
ggtgacggacaggaggccgtgcagccagattgtgtcggagggcccaagggatcgccaggc
ctgccgggacccccaggcctcacaggtgccaagggcctccaagggataccaggactctca
ggagctgacggagcaccagggctcaagggtctccccggagacccaggtcgtgaaggattc
ccaggacccccagggttcgtggggccccgaggatccaaaggtgcagcaggccttcctggt
gcggatggactctcaggtcccactggtctgccaggccccatcgggccccccggggacagg
ggccttcccggagaagttctgggagcccagcccgggccccggggtgatgctggactgcct
ggacagcccgggctgaaaggccctccgggagagagaggcccacctggattcaggggaagc
cagggcatgccgggaatgccgggcctgaagggccagcccggcttcctaggaccctcgggc
cagccaggcctgcccgggccgccaggacagcacggcttcccaggagctcccggccgggag
gggcccttggggctgccaggcgcccccggtcacggaggtctgcctggagacagaggggac
ccaggagacacaggtgtccctggccctgtgggcatgaagggtctcttcggcgatagaggt
gatcctggtttgctgggggagagaggccccccaggaagtcctgggtttaaaggaatgagc
ggaatgcctggtatccctgggcagaaaggcgggagaggttcacccgggatggatggtttc
caaggcatggtcggactcaaaggaagacctgggtttccgggaaacaaaggagaggccgga
ttttttggaattccaggactgaagggtctggctggggagccgggtgtgaaaggcagccgc
ggggaccccgggcccccaggaccacctcccatcatcctgccaggaatgaaagacatcaaa
ggagaaaaaggagatgaagggcctatggggttgaaagggtacctgggcctaaaaggtgtt
cccggaatgccagggatcccagggctgtcgggagtccccgggttgccggggaggccgggc
cacatcaaaggagtcaaaggagacatcggcgttcccggcgtgcctggttcaccaggattc
cccggcgtgcctggcccccccggaatcatagggtttcccgggttcacaggaagtaggggc
gacaagggagctccgggcagagcaggcctgtacggcgaggttggccccacaggtgacttc
ggtgacattggagacactatagatctgccgggaagcccaggcctgaagggggagcggggc
gtcactggggcaccaggtctaaagggattctttggggaaagaggaacagtgggcgaagtc
ggcttccccgggataacaggcgtgccaggcgtccagggcccccccggacccaaagggcaa
acaggcttcccaggactgacagggctgcagggaccacagggagagccggggcgagtggga
ttgcccggtgacaaaggagaccacggctggccggggattccaggcttgccaggttttccc
ggcatccgaggcatcagcggactgcacggcctgccaggcaccaaaggctttccaggatcc
ccaggtgcggacatccacggagaccccggcttccccggtcctactggggaccggggtgac
ccaggagagcccaacacccgcccaggtccttttggagccccaggacagaaaggggagcga
ggagatccaggggaacgaggcccagtcgggagcccaggacttcagggcttcccaggcatc
acccccccttccaacatgtctggcttacctggtgacaaaggggcgccgggcatatttggc
ctggaaggttaccgagggcccccggggccacctggacctgccgctcttcctggaagcaaa
ggagatgtggggaacccaggagcgccaggaaaccccgggaccaaaggatggggcggagac
cccggggcccagggccggcccggcgtgctcggtctcccgggagagaaagggcccagaggg
gagccaggattcatgggaaacacgggagccaccgggagtgtgggcgaccgaggccccaag
ggacccaagggaggccggggactcccaggtgcccctggttctgtgggatcccctgggatt
gcaggaatcccccagaagattgccatccagccggggccagtgggtccgcagggaaggaga
ggcccccccggggcgcagggagagatggggccccagggccccccaggagaaccaggtttc
cgcggggctcccgggaaggcagggccccagggcagaggtggtgtgtctgctattcccgga
ttccgaggagaccaggggcccacgggacagcaggggccggtgggccaggaaggggagccg
ggccgcccagggtcccccggcctgccgggcatgcccggccgcagcgtcagcatcggctac
ttgctggtgaagcacagtcagacggcccaggagccccagtgccccgtgggcatgagcaag
ctctggagcgggtacagtctgctatacttggagggccaggagaaagcccacaaccaggac
ctgggactggcgggctcctgcctggctcggttcagcaccatgcccttcctatactgcaac
cccggggatgtgtgctacttcgccagtcggaacgacaagtcctactggctgtccaccact
gccccgctgcccatgatgcccgtggcagaggacgacatcaggccctacatcagtcgctgc
tccgtgtgcgaggccccagctgtcgccatagcggtgcacagccaagatgtctccatcccc
cactgcccagctggatggcggagtctgtggattggatactccttcctcatgcacacagcc
gccggtgacgagggaggcggacagtcgctggtgtcgccgggcagctgcctggaggacttc
cgcgccacgcccttcatcgagtgcaacgggggccgcgggacgtgccactactacgccaac
aagtacagcttctggctcaccgccatccccgagcagaccttccagggcgcgccgtctgcc
gacacgctcaaagcggggctcgtccggacgcacatcagccgctgccaggtgtgcatgaag
aacctgtga
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