Odobenus rosmarus divergens (Pacific walrus): 101381478
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Entry
101381478 CDS
T05148
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta isoform X1
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oro01001
]
101381478 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oro04121
]
101381478 (TRIM28)
Enzymes [BR:
oro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101381478 (TRIM28)
Protein kinases [BR:
oro01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
101381478 (TRIM28)
Ubiquitin system [BR:
oro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101381478 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-B_box_Trim66
PHD_2
PHD-1st_NSD
zf-C3HC4
Prok-RING_1
YqxI
YaaC
Motif
Other DBs
NCBI-GeneID:
101381478
NCBI-ProteinID:
XP_004405733
UniProt:
A0A2U3WBE6
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MAASAAAASAAAAAAAASGSPGPGEGSAGGEKRAAASSAAAAASASASSPAGGGGEALEL
LEHCGVCRERLRPEREPRLLPCLHSACSACLGPPAPAAANSSGDGGAAGDGAVVDCPVCK
QQCFSKDIVENYFMRDSGSKAATDSQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAH
QRVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQ
YQFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKMAILQ
IMKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTAL
LLSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNSTGPT
SMAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSADDPYSSAEPHVSGVKRSRSGEGEVSGL
MRKVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQPGTAPPGA
PGAPPLPGMAIVKEEETEAAIGAPPAATEGPETKPVLMALAEGPGAEGPRLASPSGSTSS
GLEVVAPEGSSAPAGGPGALDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPG
EEWSCSLCHVLPDLKEEDGSLSLDGGDSTGVVAKLSPANQQKCERVLLALFCHEPCRPLH
QLATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKAD
VQSIIGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGAGLSAQELSSGPGDGP
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcttccgcggcggcggcggcggcggccgcctcgggcagc
ccgggcccaggcgagggctcggcgggcggcgaaaagcgcgccgccgcctcgtcggccgcg
gccgcggcctcggcctcggcctcgtcgcccgcggggggcggcggcgaggcgctggagctg
ctggagcactgcggtgtgtgccgggagcgcctgcgccccgagagggagcctcgcttgttg
ccctgcctgcactcggcttgcagtgcctgcctcgggcccccggcgcccgccgccgccaac
agctcgggggatggcggcgcggcgggcgacggcgccgtggtggactgtcctgtgtgcaag
cagcaatgcttctccaaagacattgtggagaattactttatgcgtgacagcggcagcaag
gctgccacagactcgcaggatgcaaatcagtgctgcactagctgtgaggataatgcccct
gccaccagctactgtgtggagtgctctgagccgttgtgtgagacgtgtgtggaggcacac
cagcgggtgaagtacaccaaggaccacaccgtgcgctccactgggccagccaagtcaagg
gatggtgagcgtacggtgtactgcaacgtgcacaagcacgagcccctcgtgctgttctgc
gagagctgtgacaccctcacctgccgggactgccagctcaacgcccataaggaccaccaa
taccagttcctggaagatgcagtgaggaaccagcgcaagctcctggcctcgctggtgaag
cgcctcggggacaagcatgcaacgctgcagaagaacaccaaggaggttcgcagctcgatc
cgccaggtgtctgatgtacagaagcgtgtgcaggtggatgttaagatggccatcttgcag
atcatgaaggaactgaacaagcggggccgtgtgctggtcaacgatgcccagaaggtgact
gaagggcagcaggagcgcctggagcggcaacactggaccatgaccaagatccagaagcac
caggaacatatcctgcgctttgcctcatgggctctggagagtgacaacaacacggccctg
ctgctctccaagaagctgatctacttccagctgcatcgggccctcaagatgattgtggac
cctgtggagccacatggcgagatgaagttccagtgggacctcaatgcctggaccaagagt
gcagaggcttttggcaagatcgtggcagagcgtcctggcaccaactcaacaggccctacg
tccatggcccctcctcgggctccagggcccttgagcaagcagggctctggcagcagccag
cccatggaggtgcaggaaggctatggctttggctcagcagacgatccttactcgagtgca
gagccccatgtgtcaggtgtgaagcggtcccgctcaggtgagggcgaggtgagtggcctc
atgcgcaaggtgccccgggtgagcctcgagcgcttggacctggatctcacagctgatagt
cagccaccagttttcaaggtcttcccaggcagcactactgaggattacaatctcatcgtt
attgagcgtggtgctgcagctgctgcagctggacagcctgggactgctccacccggggcc
cctggggccccgcctctgcctggtatggccatagtcaaggaagaagagacagaggctgcc
attggagccccgcctgctgccactgagggccctgagaccaagcctgtgctgatggccctg
gcggagggccctggtgctgagggcccgcgcctggcctcacccagtggcagcaccagttca
ggtctggaggtggtggctccagagggcagttcagccccagcaggtggcccgggtgccctg
gatgacagtgccaccatctgccgtgtctgccagaagccaggcgatctggtcatgtgcaac
cagtgcgagttctgcttccacctggactgccacctgcctgccctgcaggatgtgccaggg
gaggagtggagttgctctctctgccatgtgctacccgatctgaaagaggaagatggcagc
ctgagcctggatggtggtgatagcaccggtgtggtggccaagctctcgccagccaaccag
cagaagtgtgagcgtgttttgctggccctgttctgtcatgagccctgccggcccctgcac
cagctggctactgactccactttctccctggatcagcctggcggcaccctggacctaacc
ttgatccgtgcccgtctccaggagaagttgtcacccccttatagttccccccaggagttt
gcccaggatgtgggccgcatgtttaagcagttcaacaagctgacagaggacaaggcagac
gtgcagtccatcatcggcctgcagcgcttctttgagactcgcatgaacgaggcctttggt
gacaccaagttctcagctgtgctggtggagcccccgccgctgagcctgcctggtgctggc
ctgagtgcccaggagctatccagtggtcctggtgatggcccttga
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