Odobenus rosmarus divergens (Pacific walrus): 101381689
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Entry
101381689 CDS
T05148
Symbol
COL6A1
Name
(RefSeq) collagen alpha-1(VI) chain
KO
K06238
collagen type VI alpha
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04151
PI3K-Akt signaling pathway
oro04510
Focal adhesion
oro04512
ECM-receptor interaction
oro04518
Integrin signaling
oro04820
Cytoskeleton in muscle cells
oro04974
Protein digestion and absorption
oro05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
101381689 (COL6A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
101381689 (COL6A1)
04518 Integrin signaling
101381689 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
101381689 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
101381689 (COL6A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
101381689 (COL6A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
101381689 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oro04147
]
101381689 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
oro00536
]
101381689 (COL6A1)
Exosome [BR:
oro04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
101381689 (COL6A1)
Glycosaminoglycan binding proteins [BR:
oro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
101381689 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
101381689 (COL6A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Motif
Other DBs
NCBI-GeneID:
101381689
NCBI-ProteinID:
XP_004410696
UniProt:
A0A2U3WNN5
LinkDB
All DBs
Position
Unknown
AA seq
1027 aa
AA seq
DB search
MKVARALLPLLLQACWAAAQDVPGSARAVAFQDCPVDLFFVLDTSESVALRLKPYGALVD
KVKAFTKSFIDNLRDRYYRCDRNLVWNAGALHYSDEVEIISPLRPMPSDRDALKARVDAV
KYFGKGTYTDCAIKKGLEELLVGGSHLKENKYLIVVTDGHPLEGYKEPCGGLEDAVNEAK
HLGIKVFSVAITPDHLEPRLSIIATDHMYRRNFTAADWGQNRDAEEIITQTIDTITDMIK
NNVEQVCCSFECQPARGPPGPRGDAGYEGERGKPGLPGEKGEAGDPGRPGDLGPIGYQGM
KGEKGSRGEKGSRGAKGYKGEKGKRGIDGVDGMKGEMGYPGLPGCKGSPGFDGTQGPPGP
KGDAGAFGRKGEKGAPGADGEPGRPGNTGPPGDEGEPGLPGPPGEKGEAGDEGNPGPDGA
PGERGGPGERGPRGTPGVRGPRGDPGEAGPQGDQGREGPVGVPGDPGEAGPAGPKGYRGD
EGPPGPEGSRGAPGPAGPPGDPGLMGERGEDGPPGNGTEGFPGFPGYPGSRGPPGINGTK
GYPGLKGDEGEAGDPGEDNKDISPSGIKGAKGYRGPEGPPGPPGHTGPPGPDECEILDII
MKMCSCCECKCGPIDILFVLDSSESIGLQNFEIAKDFVIRVLDRLSRDELVKFEPGQSHA
GVVQYSHNQMQEHVDLRDPSIRTVQELKEAIKKLRWMAGGTFTGEALQYTRNQLLPPTQN
NRIALVITDGRSDTQRDTTPLSVLCGPDIQVVSVGIKDMFGYVAGSDQLNVISCQGLAPQ
DRPGISLVKENYAELLEDNFLKNVTTQICIDKKCPDYTCPITFSSPADITILLDGSASVG
SHNFDTTKRFAKRLAERFLTAGRTNPSHEVRVAVVQYSGPGQQRPGRGSLQFLQNYTVLA
STVDSMDFFNDATDVNDALSYVTRFYREASPREAKKKLLLFSDGNSQGATAAAIEKAVQE
AQRADIEIFVVVVGRQVNEPHIQVLVTGKTAEYDVAFGERHLFRVPSYQALMHGVFYQTV
SRKVALG
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggcccgcgctctgctccccctgctgctgcaggcttgctgggcggccgctcag
gacgtcccgggcagcgccagggccgtggccttccaggactgccctgtggacctcttcttt
gtgctggacacctctgagagcgtggccttgaggctgaagccctacggagccctggtggac
aaggtcaaggccttcaccaagagcttcatcgacaacctgagagacaggtactaccggtgt
gaccgcaacctggtgtggaacgcgggtgccctgcactacagcgacgaggtggagatcatc
agcccactcaggcccatgccaagcgatcgcgacgcactcaaggccagagtggatgccgtc
aagtacttcggcaagggcacctacacggactgcgccatcaagaaggggctggaggagctc
cttgtggggggctcccacctgaaggagaacaagtacctgattgtggtgaccgacgggcac
cccctggagggctacaaggagccgtgtgggggcctggaggacgccgtgaacgaggccaag
cacctgggcatcaaggtcttctcggtggccatcacgcccgaccacctggagccacgtctg
agcatcatcgccacggaccacatgtaccgacgaaacttcacggcggccgactgggggcag
aaccgcgacgccgaagagatcatcacccagaccatcgacaccatcaccgacatgatcaaa
aacaatgtggaacaagtgtgctgctccttcgaatgccagcccgccagaggacctcccggg
ccacggggagacgccgggtacgagggagaacgtgggaagccaggtctcccaggagagaaa
ggagaagccggagaccccggaaggcccggggacctcggacccatcggctaccaggggatg
aagggagaaaaagggagccgaggggagaagggctccaggggagccaagggctacaagggc
gagaagggcaagcgtggcattgacggtgtggacggcatgaagggggagatggggtacccc
ggcctgccaggctgcaagggctctcctggattcgacggcactcaaggacccccgggaccc
aaaggcgacgcaggtgccttcggacggaaaggagagaagggtgcccctggagctgacggg
gagcccgggaggccagggaacacaggcccccccggagacgagggcgagccgggcttgcct
ggtcccccaggagagaagggagaagccggtgacgagggaaacccgggaccggatggtgcc
cccggcgagaggggcggccctggggaaagaggaccacgggggaccccaggtgtgcggggc
ccacggggggacccgggcgaagctggaccccaaggtgaccagggacgagaaggccccgtc
ggtgtccccggagacccgggcgaggctggccccgctggacctaaaggttaccgaggtgac
gaggggcccccagggcctgagggttccagaggagctccagggcccgcaggaccccctgga
gaccccgggctgatgggtgaaaggggggaagacggcccacccggaaacggcaccgagggc
tttcctggcttccctggctacccaggcagcaggggccccccggggataaatggcactaaa
ggctacccaggcctcaagggggatgagggagaagccggagaccctggagaggacaacaag
gacatctcaccctcaggcatcaaaggagcaaagggctaccggggccctgaaggccccccg
ggacccccaggccacacaggaccgccagggccagatgaatgtgagatcttggacatcatc
atgaaaatgtgctcttgctgtgagtgcaagtgtggacccatcgacatcctctttgtgctg
gacagctcggagagcattggcctgcagaacttcgagatcgccaaggacttcgtcatcagg
gtcctggaccggctgagcagagacgagctggtcaagtttgagcctgggcagtcccacgcg
ggtgtggtccagtacagccacaaccagatgcaggagcacgtggacctgagggaccccagc
atcaggaccgtccaggagctcaaggaagccatcaagaagctgcggtggatggcgggcggc
acgttcacaggagaggctctgcagtacacccggaaccagctgctgccgcccacccagaac
aacaggattgcgctcgtcataacggacggccgctcggacacccaaagggacaccaccccg
ctcagcgtgctctgtggtccagacatccaggtggtctctgtgggcatcaaggacatgttt
ggctatgtcgccggctccgaccagctcaacgtcatctcctgccaaggcctggcacctcag
gaccggccaggcatctcgctggtcaaggagaactatgcagagctgctggaggacaatttc
ctgaagaacgtcaccacccagatctgcatagacaagaaatgtccagattacacctgccca
atcacattctcctccccggccgacatcaccatcctgctggacggctcggccagcgtgggc
agccacaacttcgacaccaccaagcgctttgccaagcggctggccgagcgcttcctgacg
gcgggcaggacgaacccatcccacgaggtgcgcgtggcggtggtgcagtacagtggtccc
gggcaacagcggccggggcgtgggtccctgcagttcctgcagaactacaccgtgctggcc
agcaccgtggacagcatggacttcttcaacgacgccaccgacgtcaacgatgcccttagc
tacgtgacgcgcttctaccgtgaggcctcgccccgtgaagccaagaagaagctgctgctc
ttctccgacggcaactcgcagggggccacggcggcagccatcgagaaggcagtgcaggag
gcccagcgggcggacattgagatcttcgtggtggtggtgggccgccaggtgaacgagccc
cacatccaagtcctggtcacgggcaagacggccgagtacgacgtggcctttggcgagcgc
cacctgttccgtgtgcctagctaccaggccctgatgcacggcgtcttctaccagaccgtg
tccagaaaggtggcgctgggctag
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integrated database retrieval system
