Odobenus rosmarus divergens (Pacific walrus): 101382135
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Entry
101382135 CDS
T05148
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oro04121
]
101382135 (TRIM56)
Enzymes [BR:
oro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101382135 (TRIM56)
Ubiquitin system [BR:
oro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
101382135 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-RING_5
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
101382135
NCBI-ProteinID:
XP_004399108
UniProt:
A0A2U3VUN5
LinkDB
All DBs
Position
Unknown
AA seq
771 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLRAPKTLPCLHTYCQGCLAQLADGGHLRCPECR
ETVPVPPAGVAAFKTNFFVNGLLDLVRARAGGDLRAGKPACALCPLVGGAGTGGPATARC
LDCADDLCQACADGHRCTRQTHTHQVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEDLLAGVDNSLAELEAARMVEKEA
LARLREQAARVGTQVEEVTEGVLRALLAQKQEVLGQLRAHVEAAEEAARERLGELESREQ
VARAAAAFARRVLSLGREAEILSLEGAIAQRLRQLQGCPWMPGPAPCLLPRLELHPGLLD
KNCPLLQLSFDEPQLQKDSGKDEAGSQGGDEAQSRTQDGAKSERQGGIQPQSRDGAYTPK
EDRAQTPQEDGAQTPKEDRAQTPQEDGAHTPKEGRAQTPLEDEGAQTPRGSRSNKKRKFK
GRLKSISREPSPAPGLNLEGSGLLPRPIFSCSFPTRMPGDKRSPRITGLCPFGPREILVA
DEQNRALKRFSLSGDYRGAVPVPEGCSPCSVAALQGAVAFSAGARLYLISPDGEVQWRRA
LSLSQASHAVAAMPSGDRVAVSVSGHVEVYNMEGSLATRFIPGGKANRGLRALVFLTASP
QGNFVGSDWQQNSVVVCDGLGQVIGEYRGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVI
LDPKGSLLGDFLTAYHGLEKPRVTTMVDGRHLVVSLSNGTIHVFRVRPPDS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccagggatcctcgccctccctcctggaagccctgagcagcgatttcctggcc
tgtaaaatatgcctggagcagctccgcgcccccaaaacgttgccctgcctgcacacctat
tgccaaggctgcctggcccagctggccgacggcggccacctccgctgccccgagtgccgc
gagaccgtgcccgtgccgcccgcgggcgtggccgccttcaagaccaacttcttcgtcaac
gggctcctggatctggtgagggcccgggctggcggagacctgcgcgcggggaagcccgcc
tgcgcactgtgtcccctggtggggggggcgggcaccgggggcccggccacggcccggtgc
ctggactgcgcggacgacctgtgccaggcgtgtgccgatggccaccgctgcacccggcag
acccacacccaccaggtggtggacctggtgggctacagagcgggttggtatgacgaggag
gcccgggagcgccaggcggcccagtgcccccagcaccccggggaggccctgcgcttcctg
tgccagccctgctcccagctgctgtgccgtgagtgccgcctggacccccacctggaccac
ccctgcctgccgctggccgaggccgtgcgcgcccggaggcctggcctggaggacctgctg
gctggtgtggacaacagcctggccgagctcgaggccgcccggatggtggaaaaggaagcc
ttggcccggctgcgggagcaggcggctagagtggggacccaggtggaggaggtgaccgag
ggggtcctccgggccctcctggcccagaagcaggaggtgctggggcagctacgggcccac
gtggaggctgccgaggaggccgcccgggagagactgggggagctggagagccgggagcag
gtggccagggcagcggccgccttcgcccgtcgggtgctcagcctgggccgcgaggcggag
atactctcgctggaaggggcgattgcccagaggctccggcagctgcagggttgtccctgg
atgcctgggccggccccctgcctgttgccccggctggagctccatcctgggctcctggac
aagaactgccccctgctacagctctcctttgacgagccccagctccagaaggacagtggg
aaagacgaagcgggaagccagggaggggatgaagctcagagccgcacgcaggatggagcc
aagtccgagagacaaggtggaatccagccccagagcagggatggagcttacaccccaaag
gaggacagagcccagacaccccaggaagatggagcccagactccaaaggaggacagagcc
cagacaccccaggaagatggagcccataccccaaaagagggcagagcccagacaccccta
gaagacgaaggagcccagaccccgaggggcagtagatccaacaagaagagaaagttcaaa
ggcaggctcaagtcaatttcccgggagcccagcccagcacctgggctaaacctggagggc
tctggcctcctccccaggcccattttttcctgcagtttccccacacggatgcctggagac
aagcggtctcctcggatcacagggctctgtcccttcggcccccgggagatcctggtggcc
gatgagcagaacagggcactgaagcgcttctccctcagtggtgactacaggggcgcggtg
cccgtccccgagggctgctccccgtgcagtgtggctgccctgcagggggctgtggccttc
tcggctggtgcgaggctctacctcatcagccctgacggcgaggtgcagtggcgccgggcc
ctgagcctctcccaggccagccacgccgtggccgcgatgccaagcggggaccgggtggcc
gtcagcgtgtcgggccacgtggaggtgtacaacatggaaggcagcctggccacccggttt
atcccgggaggcaaggccaacaggggcctgcgggccctggtgttcctgaccgccagcccc
cagggcaattttgtggggtccgattggcagcagaatagcgtggtggtctgtgatgggctg
ggtcaggtgatcggggagtaccgggggccgggcctgcacggctgccagccaggctctgtg
tctgtggataagaaaggctacatctttctgacccttcgcgaggtcaacaaggtggtgatc
ctggatccgaaggggtcactgcttggcgacttcctgacagcctatcatggcctggagaag
cccagggtgaccaccatggtggacggcaggcacctggttgtgtccctcagtaacgggacc
atccacgtctttcgggtccgccctcctgatagttaa
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integrated database retrieval system
