Odobenus rosmarus divergens (Pacific walrus): 101382227
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Entry
101382227 CDS
T05148
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2
KO
K10897
partner and localizer of BRCA2
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03440
Homologous recombination
oro03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101382227 (PALB2)
03460 Fanconi anemia pathway
101382227 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oro03400
]
101382227 (PALB2)
DNA repair and recombination proteins [BR:
oro03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
101382227 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
101382227 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
101382227
NCBI-ProteinID:
XP_004398861
UniProt:
A0A2U3VU69
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQRAEKVKNSIKKTVEEHDCLLQ
QEISPQLNHSEPKNKVSPCDTLQISTHLDEETGEKTPITLDFEPESFNPGHGPVEELHIQ
RTGDSQEHFPYQASGSEKRQSELPGRRKKQQKRTYTAQARESFFDADSLMLSGKRLKEQE
EINRENPRTPVNERTCLSSSTSDIPGSPAPATETNARGVLIPPTAKPQRGVDALVRGNNF
PGMPTLASFTLSNSSSGPHLEHKPPKGDCELTTHNLKNINPASPVDLEAQGRKMTVYTDN
PEVNKAVSASGQLPRSPDLEANNSYSINKLTYDNLTASENQNLKGQNHTEKSLTSPHNTP
DGRNESLQENEVVSQSKSLSPEVISPASAENQTHSCTMLEGLLFPAEYYVRTTRRMSNCQ
RKVALEAVIHSHLGVRKKGFKNKNKEATKNLNLCNEETDQSEIRTSDTCTGQPSSRRRQK
GLLLTEVNSPTGPTKDNLPRKAVTQPSGRRHGGKRKSISPPVLDHHELLLPTPGTAGVNR
SKEEVTLHKDENEKLFLSILGKEDHCQKEDSLPSRNNAYLALDSAAFRASFQGNELLSLK
QLSSFLKTTDFQLPDEVFGPLKLEKLKSCSEKPVEPFVSSTYGQMHLKEGNCSILEELTP
QQINIETEDLEEEILVLPGKAQPKTSNLTSRSQKGLSSSILLFTPLNTGAPEDKNGPTAD
VCSHAFPTLGTTPAFGSQAHCEKVCAEAVGPTCSTPQLPHLKDSDQKRRNGWASPSKSDC
RLVASGREGQPSCDCDSGPQATPLPPESVPLKDSQLCGNPHPESWKQSTEQTEVTDLPAY
DTLNPRHLQLVSKLKNPSGSCSVDVSAMWWERAGFKEPCIITACEYVVSLWKPLNTWQWE
KLYSWHFTEVPVLQIVPVPDVCNLVCVALGNLEIREIRALLCSSDGKREKQVLLSSGNIK
AVLGLTEKKLVSSSGTLCDQQVEIMTFAEDGGSKEKQFLMSPEETVLTFAQVQGMQEALL
GTTMMNNIVIWNLKTGQLLKKMHIGDSYQASVCHKAYSEMGLLFVVLSHPCAKESEPLGS
PVFQLIVINPKTSLSVGVVLYCLPQGQAGRFLEGDVKDHFAASVLTSGTIAIWDLLLGHC
TALLPPVSDQHWSFVKWSGIDSHLLAGQKDGNIFVYRY
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctcccgggaagcccctcagctgtgaggagaaggaaaagttgaaggaaaaa
ttagcattcttgaaaagggaatacagcaagacactggcccgccttcagcgtgcccaaaga
gctgagaaggttaagaattctattaaaaaaacagtggaagaacatgattgcttgctccag
caagaaatttcaccacagctaaaccactcagaacctaaaaataaagtatctccttgtgac
acattacaaatcagcacccatctggatgaagaaactggagaaaagacacctatcacactt
gactttgagcctgagtccttcaaccctggacatggccctgtggaggaattacatatacaa
agaacaggtgatagccaagaacattttccctaccaggccagtggctctgagaaaaggcag
agtgagctgccagggagaagaaaaaagcagcagaagagaacatacactgcacaggcaaga
gaatctttctttgatgcggattcactcatgctttctggaaaaagactaaaggaacaggag
gaaatcaatagagaaaatcctaggacacctgtaaatgaaagaacttgtctttcaagttct
acgtctgacatccctggttctccagcaccagcgacagaaactaatgcaagaggtgtatta
attccaccaactgccaaaccgcaaagaggtgtcgatgcacttgtaagaggaaataatttc
cccgggatgcctacgcttgcttcatttactctgtcaaatagcagtagcggtccgcacctt
gaacataagcctcctaaaggtgactgtgaactcactactcacaatctgaaaaacattaac
cctgcttcacctgtagacctagaggcacaaggcagaaaaatgacggtctatacagataac
ccagaggtaaacaaagctgtaagtgcaagtggccagctgcctagaagtcctgacttagag
gcaaataattcatactctataaataaactcacttatgataacttaacagccagtgaaaac
caaaacttaaaaggacagaatcacacagagaagtctttaacatctccccataacactcct
gatggtagaaatgaaagtcttcaggaaaatgaggttgtaagtcaatctaagagtcttagc
ccagaagtaatctctcctgcttctgcagaaaatcaaacacattcttgtacaatgctcgaa
ggccttctatttcccgcagaatattatgttagaacgacacgacgcatgtcaaattgccag
aggaaggtagccctggaggctgtaattcacagtcatttgggtgtcagaaagaaagggttt
aaaaataaaaataaggaagcaactaaaaatttaaacctttgcaatgaagaaactgaccag
agtgaaattagaacatctgacacatgcacaggacaaccaagttcaagaagacgtcagaaa
ggtctcttgttaactgaagtcaactctcccaccgggcccactaaagataaccttcccagg
aaggcagttacacagccatctggtagaagacacggaggaaaaagaaagtcaatctccccg
cctgtattggatcatcatgaactacttttgccaactcctggcacagcaggtgttaataga
tccaaggaagaagtcaccctacacaaagatgagaatgaaaagttgttcctttctatttta
gggaaggaagatcattgtcaaaaagaggactcccttccttccagaaataatgcttatcta
gctttggattctgctgcattcagggcttcatttcaggggaatgaattgctaagtttaaag
caactgtcatcttttctcaaaaccacagactttcagttacctgatgaagtctttggacct
cttaagcttgaaaaactgaagtcctgttcagaaaaaccagttgagccttttgtatcaagc
acgtatggacagatgcaccttaaggagggaaactgtagcattttggaagaactgactcct
caacaaatcaatattgaaacggaggacttggaagaggaaattcttgttctcccgggaaaa
gcacaacctaaaacgtcaaacctaacaagccggtctcagaagggcctttcttcatccata
ttacttttcacgcctttaaataccggtgcccccgaggataaaaacgggcccacagcagat
gtgtgctcgcacgctttccccaccttaggcactactccagcttttggctcccaagcacac
tgtgaaaaagtgtgtgcagaggctgttgggccaacttgctctacaccccaacttcctcac
ttaaaagacagtgatcagaaacgacgaaatggttgggccagcccgtcaaaatcagattgc
cgccttgttgcgtcagggagggaaggacagccttcctgtgactgtgattctggtccccag
gcaacacctcttccccctgagtcagtccctctcaaagacagtcagctgtgtggaaatcca
cacccggagtcgtggaaacagtccaccgaacagactgaagtaactgaccttcctgcttat
gataccttaaacccacgccaccttcaattggtttcaaagttaaagaacccttccggttcc
tgttcggtggatgtgagtgccatgtggtgggaaagagcaggtttcaaagagccatgtatc
ataactgcctgtgaatacgtagtttctctttggaaacctctcaatacttggcagtgggaa
aaactttattcctggcacttcacagaggttccagtattacagatagttccagtgcctgat
gtttgtaatctcgtgtgtgtggctttgggaaatttggaaatcagagaaatcagggcatta
ctttgttcctctgatggtaaacgtgaaaagcaagtactactgagttctggaaatataaaa
gctgtgcttggcctgacagagaagaagctagtcagtagcagtggaaccctttgtgaccaa
caagtagaaatcatgacatttgcagaagatggaggaagcaaagaaaaacaatttttgatg
tcccctgaagagactgtactaacttttgcccaggtccaagggatgcaggaagctctgctt
ggtaccactatgatgaacaacattgttatttggaatttaaaaactggacagctcctgaaa
aagatgcacattggtgattcctaccaagcttcagtctgtcacaaagcctattctgaaatg
gggcttctgtttgttgttctgagccatccttgtgccaaagagagtgaaccgctgggaagc
cctgtatttcagctgatcgtgattaatcctaagacaagcctgagtgtgggcgtggtgctc
tactgtcttcctcaagggcaggctggaaggttcctggaaggagacgtgaaagatcatttt
gcggcctcagtactgacttctggaacgattgccatttgggacttacttctaggtcattgt
actgctctcctcccacctgtctctgaccagcattggtcttttgttaaatggtcaggtata
gattctcatttgctggctggacaaaaagatggaaatatatttgtataccgctactaa
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