Odobenus rosmarus divergens (Pacific walrus): 101382903
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Entry
101382903 CDS
T05148
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04612
Antigen processing and presentation
oro05145
Toxoplasmosis
oro05152
Tuberculosis
oro05164
Influenza A
oro05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
101382903 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101382903 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
101382903 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
101382903 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
101382903 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oro01001
]
101382903 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
oro04054
]
101382903 (CIITA)
Enzymes [BR:
oro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101382903 (CIITA)
Protein kinases [BR:
oro01001
]
Serine/threonine kinases: Other
TAF1 family
101382903 (CIITA)
Pattern recognition receptors [BR:
oro04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
101382903 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
LRR_8
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
101382903
NCBI-ProteinID:
XP_012418132
LinkDB
All DBs
Position
Unknown
AA seq
1210 aa
AA seq
DB search
MNHFQTILTRVRMLLSSHRPSQVQALLDHMLEKELLSREYHFALLCEPDGEALARKISLT
LLEKGDPDLALLRWAWSGLQVPVAERNPDSKDHGGSGQCAAMELGSLEGGYLELLNSSAD
PLQLYHLYDQTDLAREEIELCSEPDMDTINCEQFSKLLCDMEGDEETREAYANIAELDQY
VFQDSQLDGLGKDIFIEHIGLEEMISESVEVLEEAGQKSQKRSFPEELSVDLKHRKLAEP
LAMPMVTGTFLVGSVSDSAALPCLSPPAVFNKEPASGQSWLEETVLMPVHPSSSLLSHLS
LPAGCIQIIPGLPSLPQGLWQISGAGMGVSGMVIYQGEMPQASQVLPSSGPAVQSLPKSP
DRPGSTSPFAPSAADLPGMPEPALTSRANTTEDQMSPIQSQAAHEISSKPPKWPESVERF
CSSLRDEYRAEFAGPEGILVEVELVKARLERSSGKSQERELATPDWAERQLARGGLAEVL
GAAGDRRRPRETQVIAVLGKAGQGKSRWAREVSRAWACGQLPQYDFVFYLPCHCLDRAKG
DTYRLQDLLFCLGPQPRPMDEEVFGHVLRRPDRVLLILDAFEGLEGQDGFLHSAGGPMST
EPHSLRGLLAGLFQRKLLRGCTLLLTARPWGRLAQSLSKADVLFEVAGFSAEQAETYMTR
YLECTGATAHRERALALLRGQPFLLSLSHSPTVCRAVCRLSEALLELGDKAELPSTLTGL
YVGLLGPAARDSPPEALAGLARLAWELGRKHQGTLQGSQFPSATVRAWAVAKGLVQPVPG
APDVELAFSSFLLQCFLGAVWLALSTEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAG
LLFQPHADCLGALAGPAAATMGARKRNVLSRYLKRLQPGTLRAGRLLELLHCAHEATDAA
IWQHVVQGLPARLSFLGTRLTPPNTYVLCSALAAAGQDFSLDLRSTGIDPAGLGSLVGLS
CVTHFRASLSDMVGLWESLQQRGETKLLRAVEEKFTIEPFKAKSPKDVEDLGNLVQIQRT
RNSSEDTAEELPAVRDLKKLEFALGSVLGPQAFPKLVRILEAFSSLQHLDLDSLSENKIG
DEGVEQLSATFPRLRALETLNLSQNSITDVGACKLAEALPSLAASLLRLSLYNNSICDVG
AESLAHVLPDMVSLRVLDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHL
QQLDSRISLR
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagaccatcctgactcgggtccggatgctgctgtccagccatcggccg
agtcaagtgcaggccctcctggaccacatgctggagaaggagcttctgtcccgggagtac
cacttcgccctgctctgcgagcctgatggcgaggccctggccaggaagatctccttgacc
ctgctggagaaaggagacccagacttggccctcttgaggtgggcatggagtgggttgcag
gtcccagtggccgagaggaatcccgactccaaggaccacggtggcagcggacagtgtgcc
gccatggagttggggtctctagaaggcgggtacctggagcttctcaacagcagtgccgat
cccttgcagctctaccacctctatgaccagacggacctggctagagaagagattgagctc
tgctcagaacccgacatggacaccatcaactgcgaacagttcagcaaactgttgtgtgac
atggaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtac
gtgtttcaggactcccaactggacggtctgggcaaagacattttcatcgagcacatagga
ttggaagaaatgatcagcgagagtgtcgaggtgctggaggaagcagggcagaaaagtcag
aaaagatccttcccagaggagctgtctgtggacttgaagcacaggaagctggccgagccc
ctcgctatgcccatggtgactggcacgttcctggtcgggtcagtgagtgactccgcagct
ctgccctgcttgtcaccacctgctgtgttcaacaaggagccagcatccggccagagctgg
ctggaggagaccgtcctgatgcctgtgcacccttccagttccttgctgagccacctgagt
cttcctgctggatgtatccagatcatccctggcctcccctctctgccccaggggctctgg
caaatctcaggggctgggatgggggtgtctggtatggtcatctatcaaggcgagatgccc
caggccagccaagtgcttccttccagtggcccagctgtgcagagcctccccaagtcccca
gatcggcccggctccaccagcccctttgccccgtctgcagctgaccttcctggaatgcca
gaaccagctttgacctcccgtgcaaatacgacagaggaccagatgtcccctatccaaagc
caggcagctcacgagatctccagcaagcctccaaaatggcctgagagcgtggagcggttc
tgcagctccctacgggacgagtaccgggctgagttcgcaggcccggaaggcatcctggtg
gaggtggagctggtgaaggcgcggctggagagaagcagtggcaaaagccaggagagggag
ctggccaccccggactgggcagagaggcagttggcccgcgggggtctggccgaggtgctg
ggggctgccggggaccgccggcggccacgggagacacaggtgatcgccgtgctgggcaaa
gcaggacaggggaagagccgttgggcccgggaagtgagccgggcctgggcctgcggccag
ttgccccagtacgacttcgtcttctacctcccctgccactgtttggaccgcgccaaaggg
gacacttaccgcctgcaggatctgctcttctgcctgggcccccagccacggcccatggac
gaggaggtcttcggccacgtcttgaggcggcccgaccgggttctgctcatcctggacgcc
ttcgaggggctcgaaggccaagatggcttcctgcacagcgcgggcggacccatgtccaca
gaaccccactccctccgggggctgctggccggactcttccagcggaagctgcttcgaggc
tgcaccctgctgctcacggcccggccctggggccgcctggcccagagcctgagcaaggcc
gacgtcctgttcgaggtggccggcttctcagccgagcaggctgaaacctacatgacgcgc
tacttggagtgcactggggcgaccgcgcaccgggagcgagccctggccctcctccggggc
cagccgttcctgctcagcctcagccacagccccaccgtgtgccgggccgtgtgccggctc
tctgaggccctgctagagctgggtgacaaggctgagctgccctccacgctcacgggactc
tacgtgggcctgctgggccccgcggcccgggacagccccccggaggccctggcaggactg
gccaggctggcctgggagctgggccgcaaacaccagggcaccttgcagggcagccagttc
ccatcggccactgtgagggcctgggccgtggccaaaggcctggtgcagcccgtcccgggc
gcccccgatgtggagctggccttctccagcttcctcctgcagtgcttcctgggggccgtg
tggctggccctgagcactgaaatcaaggacaaggagctgccacagtacttggcgttgacc
ccgaggaagaagaggccctatgacaactggctggagggcgtgccgcgcttcctggctggc
ctgcttttccagcctcacgccgactgcctcggagccctggcagggccagccgccgccacc
atgggggccaggaagcggaatgtgctcagcaggtacctgaagcgcctgcagccagggacg
ctccgggccgggcggctgctggagctgctgcactgtgcgcacgaggccaccgatgccgcg
atctggcagcacgtggtgcaggggcttccagcccgcctctccttcctgggcacccggctc
acaccccccaacacctacgtgctatgcagcgccttggcggcggctggccaagacttctcc
ctggacctccgcagcactggcattgaccccgctgggctggggagcctcgtgggactcagc
tgcgtcacccatttcagggcttcgctgagtgacatggtggggctgtgggagtctctacag
cagcgtggggagaccaagctgctccgggcggtggaggagaagttcaccatcgagcctttc
aaggccaagtccccaaaggatgtggaagacctcggcaacctcgtgcagatccagaggaca
aggaattcctcggaagacacagctgaagagctccctgctgtccgggacctaaagaagctg
gagtttgcgctgggctctgtcttaggcccccaggcttttcccaaactggtgaggatcctt
gaggccttttcctcccttcagcatctggacctggactcgctgagcgagaacaagatcggg
gacgagggtgtcgagcagttgtcagccaccttccctcggctgagggccctggagactctc
aacttgtcccagaacagcatcactgacgtgggcgcctgcaagctcgccgaggccctgccc
tccctggctgcgtccctcctcaggctgagcctgtacaataacagcatctgtgacgtggga
gctgagagcctggcacacgtgcttccagacatggtgtccctccgggtgttggacgtccag
tataacaagttcaccgccgctggggcccagcagctcgctgccagcctgagaaagtgccct
catgtggagacactggcgatgtggacgcccaccatcccgtttggcgtccatgaacacctg
cagcagctagactcacggatcagcctgagatga
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integrated database retrieval system
