Odobenus rosmarus divergens (Pacific walrus): 101382950
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Entry
101382950 CDS
T05148
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101382950 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oro03019
]
101382950 (EDC4)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101382950 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
101382950 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_HPS5
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
DUF445
WD40_Prp19
WDR55
Motif
Other DBs
NCBI-GeneID:
101382950
NCBI-ProteinID:
XP_004393422
UniProt:
A0A2U3VFE5
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MASSCASIDIEDATQHLRDILKLDRPAGGPSAESQRPSNAYNGDLNGLLVPDPLCSGDGT
SANKPGLRAMPPINLQEKQVICLTGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVK
IQPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAASNGSAMVRVISVSASERTLLKGFTGSV
ADLAFAHLNSSQLACLDEAGNLFVWRLALVNGKIQEEILVHIQQPEGTPLNHFRRIIWCP
FIPEESEDCCEEGSPTVALLHEDRAEVWDLDMLRANHSTWPVRVSQIKQGFIVVKGHSTC
LSEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRSLSCLLFCDNHKK
QDPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAE
YLILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLP
AEEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVLAPLPTHT
AHEDFTFGESRPELGSDGLGSSTQGSQPDPRRIVELPAPADFLSLSSETKPKLMTPDAFM
TPSASLQQIAASPSSSSSSSSPSSSSLTAVSAMSSASAVDPSLPRPPEELTLSPKLQLDG
SLALSSSSGLQASPRSLLPSLLPGPADKLTPKAPGQVPTAASALSLELQEVEPLGLPQAS
PSRTRSPDVISSASTALSQDIPEIASEALSRGFVSSAPEGLEPDSMASAASALHLLSPRP
RPGPELGSQLGLDGGPGDGDRHSTPSLLEAALTQEATAPDSQVWPTAPDITRETCSSLAE
SPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASAAGGFGAKVAPPR
LPAKDWKTKGSPRASPKLKRKGKKDDGDSAVGSRLMDHQVAEAPEDWPALIWQQQRELAE
LRHSQEELLQRLCSQLEGLQSTVTGHVERALESRHEQEQRRLERALAEGQQRGGQLQEQL
TQQLSQALSSAVAGRLERSLRDEIKKTVPPCVSRSLEPVTGQLSSSVATKLTAVEGSMKE
SISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRL
GTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQGATEQMAATVSSSVRAEVQHQ
LHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPAAHLDCQA
QQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPGQVFGQPPCPLSQPVLLSLIQ
QLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSLGK
VARRLSLMLHGLVTPSLP
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatc
ctcaagctggaccggcccgcggggggtcccagtgcagagagccagcggccatctaatgcc
tacaatggggatctcaacgggcttcttgtcccagaccccctctgctcaggtgatggtact
tcagcaaacaagcctggtctccgggccatgccacctattaaccttcaggaaaagcaggtc
atctgcctcacaggagatgacagctctacatgcatcgggattttggccaaggaggtggag
attgtggctagcagtgactctagcatctcaagcaaagcacggggcagcaacaaggtgaaa
atccagcctgtggccaagtatgactgggaacagaaatactactacggcaacctgatagct
gtgtccaactcctttttggcctatgccattcgggctgccagcaacggctcggcgatggtg
cgggtgatcagtgtcagcgcttcagagcggaccctgctcaagggtttcacaggcagtgtg
gctgatctggcctttgcacacctcaattcctcacagctggcctgcctggatgaggcaggc
aacctgttcgtgtggcgcttggctctggtgaacggcaaaattcaagaagagatcttggtc
cacatccagcagccagagggcacaccactgaatcacttccgcaggatcatctggtgcccc
ttcatcccagaggagagtgaggactgctgtgaggagggcagccccacagtggccctgttg
cacgaggaccgggctgaggtgtgggatctggacatgctccgcgccaaccacagcacctgg
cctgtgcgtgtcagccaaatcaagcaaggcttcatcgtggtaaaaggccacagcacctgc
ctgagtgaaggggccctctcacctgatgggactgtcctggctactgctagccatgatggc
tttgtcaagttctggcagatctacattgaggggcaggatgagccaaggtgtctgcatgaa
tggaagcctcatgatgggcgatccctttcctgcctcctgttctgtgacaaccacaagaaa
caggaccctgaagtccctttctggaggttcctcatcactggtgctgaccagaatcgggag
ctcaagatgtggtgcacggtgtcctggacctgcctccagaccattcgcttctccccagat
atcttcagctcagtgagtgtgccccccagcctcaaggtttgtctggacctctcagcagaa
taccttattctcagcgatgtgcaacggaaggtcctctatgtgatggagctgctgcagaac
caggaggaaggccgtgcctgcttcagctccatctctgagttcctgctcacccatcctgtg
ctgagcttcggtatccaggtcgtgagtcgctgtcgactgcggcacactgaggtgctgcct
gccgaggaggagaacgacagcctaggggctgatgggacccacggagctggtgccatggag
tctgcagccggtgtgctcatcaaactcttttgtgtgcatactaaggccttgcaggacgtg
cagatccgtttccagccgcagttgaaccctgatgtgctggccccactccccacccacact
gcccatgaggacttcacatttggagagtctcggcctgaactgggctctgacggcctgggg
tcatctacccaaggctcccagcctgacccccgacgcatagtggagctgcctgcgcccgct
gacttcctcagtctgagcagtgagaccaagcccaagctgatgacacctgacgccttcatg
acacctagcgcctccctgcagcagatcgctgcgtcccccagcagctccagctccagctcc
agccccagctcctcctctcttacagctgtgtctgccatgagcagcgcctcagctgtggac
ccgtccttgcccaggccgcctgaggagctgaccttgagccccaagctgcagctggatggc
agtctggcgctgagcagcagcagcggcctgcaagcaagcccacgcagcctcttgcccagc
ctgctcccagggccagctgacaaactgactcccaaagcacctgggcaggtgcctactgct
gcctctgcactgtccctggagctgcaggaagtggagcccctggggctaccccaggcttct
cccagccgcacccgctcccctgatgttatctcctcagcttccactgccctgtcccaggac
atccctgagatcgcctctgaggccctgtcccgtggttttgtctcctctgctcctgagggt
cttgagccagacagtatggcctcagctgcctcagcgctacacctgctgtccccacggccc
cggccagggcccgagcttggctcccagcttggcctggatggaggccctggggatggggat
cggcatagtaccccttcccttttggaggcagcattgacccaggaggccacagcccctgac
agtcaggtctggcctacggcaccagacattactcgtgagacctgtagcagcctagcagag
agtcccaggaatggcctccaggagaagcacaagagcctggccttccatcgaccaccttac
cacctgctgcagcaacatgacagccaggatgccagtgctgagcaaagtgaccatgatgat
gaggtggctagccttgcttctgctgcagggggctttggcgccaaagttgcccctccacgg
ctaccggccaaggactggaagaccaagggttctcctcgagcctcacccaagcttaagaga
aagggcaagaaagatgacggggattcggctgtgggatcccggctcatggaccaccaggtg
gcagaagctcctgaggactggccagcactaatttggcaacagcagagggagctggcagag
ctgcggcacagccaggaagaattgctgcagcgtctttgcagccagcttgaaggtctgcag
agcaccgtcacgggccacgtagaacgcgccctggagtcacggcatgagcaggagcagcgg
cggctggagcgggcactggctgaggggcagcagcggggtgggcagctgcaggagcagctg
acccaacaactgtcccaggcactgtcttcggctgtagctgggcggctggagcgcagccta
cgggatgagatcaagaagacggtgcctccgtgtgtctccaggagcctggagccagtgacg
ggccagctgagtagctcagtggccaccaagctcacagccgtggagggtagcatgaaagag
agtatctccaagctgctgaagtccaagaacctgacagatgccattgcccgagcagctgca
gacacattacaggggccgatgcaggccgcctaccgtgaagccttccagagtgtggtgctg
ccggcctttgagaagagctgccaggccatgttccagcagatcaatgatagcttccgactg
ggcacgcaagagtacttgcagcagctggagagccacatgaagagccggaaggcgcgagaa
caggaggcacgggagcctgtgttggcccagctgcggggcctagtcagcacactgcagggc
gccactgagcagatggcggccaccgtgtccagcagcgtccgggctgaggtgcagcaccag
ctgcacgtggctgtgggcagtctgcaggaatccattttagcacaggtacagcgcatcgtt
aagggcgaggtaagtgtagccctcaaggagcaacaggccgccgtgacatctagcatcatg
caggccatgcgttcagctgctggcacgcctgtccccgctgcccaccttgactgccaggcc
cagcaagcccatatcctgcagctgttgcagcagggccacctcaatcaggccttccagcag
gccctgacagctgctgacctgaacctggtgctgtatgtgtgtgaaactgtggacccaggg
caggtttttgggcagccaccctgcccactctcccagcctgtgctcctttccctcatccag
cagctggcctctgaccttggtactcgaactgacctcaagctcagctacctggaagaggct
gtgatgcacctggaccacagtgaccccatcactcgggaccacatgggctccgtcatggcc
caggtgcgccagaagctcttccagttcctgcaggcggagccacacaactcacttggcaaa
gtggcccggcgtctcagcctcatgctgcacggtcttgtaacccctagcctcccttag
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integrated database retrieval system
