Odobenus rosmarus divergens (Pacific walrus): 101383828
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Entry
101383828 CDS
T05148
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03013
Nucleocytoplasmic transport
oro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101383828 (CASC3)
03015 mRNA surveillance pathway
101383828 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oro03019
]
101383828 (CASC3)
Messenger RNA biogenesis [BR:
oro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101383828 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
101383828
NCBI-ProteinID:
XP_004395081
UniProt:
A0A2U3VJL5
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHNPDDIKPRRIRKPRFGSPPQRDPNWIIERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSAPRNYSRSGGFKEGRAGFRPVEAGGQHGGRCGETVKHESSYRSRRLEQTPVR
DPSPEADAQVLGSPEKEEVASEIPAAAPDTAPPAPDRPVEKKSYSRARRTRIKAGDAVKV
AEEVPPPPEGLNPAPQVPETTPPPPAKTGNWEAPVDSTTSGLEQDVAQLNIAEQNWSPGQ
PSFLQPRELRGMPNHMHMGAGPPPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHI
SIMEGHYYDPLQFQGPIYTHGDSPASLPPQGMIVQPEMHLPHPGLHPHQTPAPLPNPGLY
PPPVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQV
YGGVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcggcagcgcgcttcgcaggacacggaggacgaagagtctggtgct
tcgggctcagacagcggcggctccccggcgcggggcggcgggagctgcagcggtagcgct
ggaggcggtggcagtggctctctgccttcccagcgcggaggccgagctggggcccttcat
ctgcggcgggtggagagcgggggggctaagagcgctgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgttctgtcggattatgaaagtgcagaagactctgaaggt
gaggaaggggaatacagtgaagaggaaaactccaaagtagagctgaaatcagaagccaat
gatgctgctaattcttcagcaaaagaagagaagggagaagaaaagcctgacaccaaaggc
actgtgactggagagaggcagagtggggatggacaggagagcacagaacctgtggagaac
aaagtggggaaaaagggccctaagcatttggatgatgatgaagatcggaagaacccagcc
tacataccccggaaagggctcttctttgagcatgatcttcgagggcagacacaggaggag
gaagtcagacccaaggggcgtcagcgaaagctatggaaggatgagggtcgctgggagcat
gacaagttccgggaagatgaacaagctccaaagtcccgacaggagctcattgctctttat
ggctatgacatccgctcagctcacaatcctgatgacatcaaaccccgaagaatccggaaa
cccaggtttgggagtcctccacaaagagatccaaactggattattgagcggccaaacaag
tcccatcgccaccagggtcctgggggcaccctaccaccaaggacatttatcaacaggaat
gctgcagggactggccgaatgtctgctcccaggaattactctcgatctgggggcttcaag
gaaggtcgtgctggttttaggcctgtggaggctggtgggcagcacggtggccgttgtggt
gagactgttaaacatgaaagcagttaccgatcacggcgcctagagcagactcctgtgagg
gacccatctccagaagctgatgctcaagtgctcggcagtcccgagaaggaggaggtggcc
tcagagataccagctgctgctcccgacactgcaccaccggcccctgacaggcctgttgag
aagaaatcctactcccgggcaagaagaaccagaatcaaagctggagatgcagtcaaggtt
gcagaggaggtgccccctccacccgaagggctgaacccagcacctcaagtcccagaaacg
acccctcctccacctgctaagactggaaactgggaggctccagtggattctactacaagt
ggacttgagcaagatgtggcacaactaaatatagcagaacagaattggagtccagggcag
ccttcgttcctgcaaccacgtgagcttcggggtatgcccaaccacatgcacatgggagca
ggacctccacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaa
cgctattcatctcagcggcaaagacctgtgccagagccccctgctcctcctgtgcacatc
agtatcatggagggacattactatgatccactgcagttccagggaccaatctatacccat
ggtgacagccctgcctcactgcctcctcagggcatgattgtgcagccagaaatgcacctt
ccccacccaggtttacatccccaccagacaccagcacctctgcccaatccgggcctctat
cccccaccagtgtccatgtctccaggacagccaccacctcagcagttgcttgcccctact
tacttttctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggg
gcactgcctcccccaccgccgcctcatctgtatcctaatacgcaggccccatcacaggta
tatggaggagtgacctactataaccccgcccagcagcaggtgcagccaaagccctcccca
ccccggaggactccccagccagtcaccatcaagcccccaccacctgaggttgtaagcagg
ggttccagttaa
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