Odobenus rosmarus divergens (Pacific walrus): 101383980
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Entry
101383980 CDS
T05148
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03440
Homologous recombination
oro03450
Non-homologous end-joining
oro04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101383980 (RAD50)
03450 Non-homologous end-joining
101383980 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
101383980 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oro03032
]
101383980 (RAD50)
03400 DNA repair and recombination proteins [BR:
oro03400
]
101383980 (RAD50)
DNA replication proteins [BR:
oro03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
101383980 (RAD50)
DNA repair and recombination proteins [BR:
oro03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
101383980 (RAD50)
BRCA1-C complex
101383980 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
101383980 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
AAA_15
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
101383980
NCBI-ProteinID:
XP_004408311
UniProt:
A0A2U3WHT9
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKVAQETDVRAQIRLQFRDVNGELIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSRSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLLKITRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKSNKESRLLNQEKSELLFEQGRLQLQADRH
QEHIRARDSLIQSLATQLELDGFERGPFNERHIKNFHKLVRERQEREAQIASQLMNDFTE
KETLKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELRNVKYELQQLEGSSDRILELDQE
LSKAERELSKAEKNSNVEALKTEVISLQNEKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASAEQNKNHINNELKRKEEQLSSYEDKLFDVCGSQDFESDLDRLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPVRQSIIDLKEKEIPELRNKLQNVNRDIQHLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKMELNRKLIQDQQEQIQHLKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTLEKLQQEKEELINKKNKSNKIAQDKMNDTKEKVKNIHAYMKD
IENYIQDGKDDYKKQKENELNKVIAQLSECERHKEDINKEMGIVRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHSLAIGRQKG
YEEEIIHFKRELREPQFRDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagccccctcacaattttggttggacccaatggggca
gggaagacgaccatcattgaatgtctaaaatatatttgtactggtgattttcctcctgga
accaaaggaaatacatttgttcatgatcccaaggttgctcaagaaacagatgttagagcc
cagattcgtctgcagtttcgtgatgtcaatggagagcttatagctgtacagaggtctatg
gtgtgtactcagaaaagcaaaaagacagaatttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaggtctgtgctaaataatgtcattttttgtcaccaagaa
gactctaattggcctttaagtgaaggaaaggctctgaagcaaaaatttgatgagattttt
tcagcaacaaggtacataaaagccttggaaacacttcggcaggtacgacagacacaaggt
cagaaagtaaaagaatgtcaaacggaactaaaatatttgaagcaaaataaggaaaaagct
tgtgagatacgtgaccagattactagtaaggaagcccagttaacatcctcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aatctccttaaaataacgagacttgacaatgaaattaaagccttggatagccggaagaag
caaatggagaaagataatagtgaactggaacagaaaatggagaaggtttttcaagggact
gatgagcaactaaatgatttatatcacaatcaccagagaacagtaagagagaaagaaagg
agactggtagactgtcagcgtgaactggaaaagtcaaataaagaatcaaggcttctcaat
caggaaaaatcagaactgctttttgagcagggtcgtctgcagctacaagcggatcgccat
caagaacatatccgagctagagattcattaattcaatctttggcaacacagctagaattg
gatggctttgagcgtggaccattcaatgaaagacatattaaaaattttcacaaacttgtg
agagagaggcaagaaagggaagcacaaattgccagccaactgatgaatgactttacagaa
aaagagactctgaaacaaaaacagatagatgagataagggataagaaaactggactggga
agaataattgagctaaaatcagaaatcctaactaagaagcagaatgagctgagaaatgtg
aagtatgaattacagcagttggaaggatcttcggacaggattcttgaactggaccaggag
ctctcaaaagctgaacgtgagctaagcaaggctgagaaaaacagcaatgtagaagctcta
aaaacagaagtaataagtcttcaaaatgagaaagcagacctagacaggaccctgcgtaag
ttggaccaggagatggaacagttaaaccatcatacaacaacacgcacccagatggaaatg
ctgaccaaagacaaagctgacaaagatgaacaaatcagaaaaataaaatctcgacacagt
gatgaattaacttcattgttaggatattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaagaa
ctagcttcagctgagcaaaataaaaatcatataaataatgaactaaaaaggaaagaagag
cagttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagacaggcttaaagaagaaattgaaaaatcctcaaaacagcgagccatgctggct
ggagccacagcagtttactcccagttcattactcagctaacagatgaaaaccagtcatgt
tgccctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactgaagtcaacagaatctgaactaaag
aaaaaagaaaagcggcgtgatgaaatgctgggacttgtccccgtgaggcaaagcataatt
gatttgaaggagaaggaaataccagaattaagaaacaaactgcagaatgtcaatagagac
atacagcacttaaagaatgacatagaggaacaggaaacactcttgggcacaataatgcct
gaagaagaaagtgctaaagtctgcctgacagatgttacaattatggagaggttccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaagcagctaagctgcaaggactagat
ttggatagaactgttcaacaagtaaaccaggaaaaacaagaaaagcaacacaaattagat
acagtttccagtaagatggaattgaatcgtaagcttatacaggaccagcaggaacagatt
caacacctaaaaagtacaacaaatgaacttaaatcagagaaacttcagatatctactaat
ttacaacgtcgtcagcagctagaggagcagactgtggaattatccactgaagttcagtcc
ttattcagagagataaaggatgctaaagagcagttaagccctttagaaacaacattggag
aagttgcagcaggaaaaagaagaattaatcaacaaaaaaaataaaagcaacaaaatagcc
caggataaaatgaatgataccaaagaaaaggttaaaaatattcatgcttatatgaaagac
attgagaattatattcaagatgggaaggatgactataagaagcaaaaagaaaatgaactt
aataaagtaatagctcaactaagtgaatgcgagagacacaaagaagatataaataaagaa
atgggaatcgtgagacaagatattgatacacagaagatacaagagagatggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggttttacaaatgaagaatgaacatcagaagttg
gaagaaaaaatagacaatataaaaagaaatcacagtttggcaatagggcgacagaaaggt
tatgaggaagaaattattcattttaagagagaacttcgagaacctcagtttcgggatgcg
gaggaaaagtacagggaaatgatgattgttatgagaacaacagagcttgtgaacaaggat
ctggacatttattataagacccttgatcaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaagtacctatcgtggacaagatatt
gaatacatagaaattcggtccgatgccgatgaaaatgtatcagcttctgataaaaggcgg
aattataactaccgcgtggtgatgctaaagggagacacagccttggatatgcgaggacga
tgcagtgctggacaaaaggtattagcctcactcatcattcgcctggccttggctgaaacg
ttctgcttgaactgtggcatccttgccttggacgagccaacaacaaatcttgaccgagaa
aacattgagtctcttgcacatgctcttgttgagataatcaagagtcgctcacagcagcgt
aacttccagcttctggttatcactcacgatgaagattttgtggagctcttaggccgttct
gagtatgtggagaaattctacaggattaagaagaacatcgatcagtgctcagagattgtg
aaatgtagtgttagctccctgggttcttatgttcattaa
DBGET
integrated database retrieval system
