Odobenus rosmarus divergens (Pacific walrus): 101385467
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Entry
101385467 CDS
T05148
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oro04131
]
101385467 (VPS13A)
Membrane trafficking [BR:
oro04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
101385467 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Mer2
Motif
Other DBs
NCBI-GeneID:
101385467
NCBI-ProteinID:
XP_004396774
UniProt:
A0A2U3VNU4
LinkDB
All DBs
Position
Unknown
AA seq
3170 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKVKVG
HIGNLNLIIPWKNLYTQPVEAVLGDIYLLIVPSSKIKYDPLKEEKQLLEAKQHELKRIEE
AKQKVADQEKLRVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRDNPLSFGISLQ
NLSMQTTDQNWVPCLHDETEKLFCKLIRLDNLFAYWNVKSQLFYLNDYDESLDSLKKGIV
NGNIVPKGYDFVFRPISANAKLQMNRRSDFDFSAPKINLDVELHDIAIELNKPQYFSVME
LLESVDMMTQNLPYRKFKPDVPLHYHARDWWAYAIHGVLEVNVCPRLRMWSWKHIREHRQ
KMKQYKELYKKKITTKKPTGEILMSLEELEKTLDVFNITISRQQAEVEVKKAGYRIFREG
AKDSEENKGWFSWLWTWSEPRNKEQPDVKPGILEEMLTSEEKTLLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSIVLREKQETPELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPRLLSSLDDATSLFQIIFEINPLDETVAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKEVNLAQLTSATLTKLEEFRDKTATGLLYIIETQKVLDLKINLKASYVIIPQG
GIFSPTSNLLLLDLGHLKVTSKSRSELPDMKPGGARLEEIMHRAYDSFDVQLTSIQLLYS
TVGDDWREARKLNVSTQHILVPMHFNVELSKAMVFMDIRMPKFKIFGKLPLISLRISDKK
LQGILELIESIPKPTPATETYAPAKPFQIQRSTSLGTSQISQKMLPFLELPCVDDDSEEE
FFDAPCSPLDEPLQSPTEIQSYQKKFQKLDCSKNMIQYKIRFEVPEVLIQFYHLVGDSEV
PVVEVDVLGLGTDVELRTFDLKANAFLKEFCLKCPEHFDANKKPIYLITTLDNTMEDLLT
LEYVKAEKNLPNLKSTYNNAVQLIKVNFSSLDIHLHTEALLNTINYFNNIIPQLEEKPAP
VSVTETEDKGEVVKKMPLKLSKNEDIITLQILAELSCLQIFIQDQKRNIAEIKIEGLDSE
IIMRPAATEINAKLRNIIVLDSDKTAVYKKAVYITGKEVFSFKMISFVDATAGSAYTDMN
VVDVQINLTVGCIEVVFITKFLYSILAFIDNFQAAKQALAEATVQAAGMAATGVKELAQR
SSRMALDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHVITESQSNPPPVIDLITIR
LSEMRLYRTQFIDDAYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNVNAQLKPMEFIL
SQEDITTIFKTLYSNIWYEEGGGASPAGLKDRNSVNSGATNASHHLEGTTVVTAAVVEIH
SQASQVKTTLNMSFRTDYLTMVLYSPGPEQTSFTDVRDPSLKLAEFKLENIISTAKMYTD
DSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRRVRDGWVTDLVLQE
TYICASVEFLLTVANVFLEAYTTGTAVETSVQTWTAKEEVSVQESEKWEINIIIKNPEIV
FVADMTRSDAPALVITTQCEICWKGDLENNTMTAAIKDLQVRACPFLPVKRKGKITTVLQ
PCDLFYQATQIGTDPQVIDISIKSLTLKVSPVIINTVITITSALYTSKDTIPQETTSSTV
HLWEKKDTKNLKMWFLEEPNEVENKAPTTELILKGEMIRVNIDSIFIVLEAGIGHRTVPM
LLAKSRFSGEGKNWSSLINLYCQLDLEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLGI
KMKKKAKKAIVESDTEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLVKAFTEAA
TGASTVFIRDLAPFMILNSLGLTVSVSPSDSFSVLNVPLAKSYVLKNEESLSMDYVGTKD
NDHFSAMTSLSSKLFFILLTPASHSTADKIPLTKVGRRLYTVRHRASGVERSIVCQVDGV
EGSKKITIRSPVQIKNHFSIPLCVYEGNTLLGTASPGSEFNIPLTSYRSPLSLKPEDEDY
QTCERIDFEEIIKNDGTFLKKKCRSKNTAKKPFIIHVVPEKDNLASLSVYSEDGWDLPYI
MHLWPPILLRNLLPYKIAYYIEGIEHKVYTLNEGHSAHICTVHLEKARLHLKLLDYLNHD
WKSEYHIKPNQQDISFINFTCVTEIEKTDLDIAIHVTYNIGQTVVAFHSPYWMVNKTSRM
LQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAVK
CKGLQMDYQVGVTIDLSSFNITRIVTFTPFYMIENKSKYHISVAEHGNDKWLSLDLEQCI
PFWPEDASNALLIQVERNQGPPKKIHFNKQANCILLRLDNELGGIIAEVNLAEHSTVITF
SDYHDGAAPFLLINHTKSDIVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRKLKWRCGK
SHGEVAQKDDMMTPINSGKKTIYLVSFFEGLQRIILFTEDPRVFKATYESEKAELAEQEI
VLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLEKEFKEY
TESSPSEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKVEYSTSAHQSSFR
IQVYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYF
KVLIQEMDLRLDLGFVYALAELMTEAEVTEKTEIELFHKDIEAFQEEYKTASLADSSQVS
LYEYFHISPIKLHLSVSLSSGKEAKDSEQQEGLMAVRSLNLLLKSIGATLTDVQDVVFKL
AFFELNYQFHTASELQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAFFY
EPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITNAMAKGVAAMTLDEDYQQKR
REAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGA
VARPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQMLQV
MENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIVH
GRRLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILTKLEEAREPSPRF
NT seq
9513 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcggtggtcgtggacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcaccctgggcatctggggaggagctgtggccttgaagaat
cttgaaattaaagaaaacgctctgagtcaactggatgtaccatttaaagttaaagttggt
catataggtaatcttaatcttataattccatggaaaaacctgtatactcaaccagttgaa
gctgtcctgggagacatttatttactcatagtgccttcttctaaaataaaatatgatcct
ttaaaagaagaaaaacaactcttggaagcaaaacaacatgaacttaaacgaatagaagaa
gcaaaacaaaaagtagctgatcaagaaaaacttcgggtggagaaacaggacacttttaca
gaaaaattaattactcagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgttatgaggatgatatcacaaatcgagacaatccactgtcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaaaactgggttccgtgtttacatgatgaaactgag
aaactattttgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagttgttttaccttaatgattatgatgaatcattggacagcttgaagaagggcattgtc
aatggaaatattgttccaaaaggttatgattttgtgtttcgccccatatctgctaatgcc
aaacttcagatgaatcggcgatcagattttgacttttctgcccccaagataaacctggat
gttgagttacatgacatagcaattgaacttaataaaccacagtatttcagtgttatggag
cttcttgaatcagttgatatgatgacgcaaaatctcccatataggaaattcaaacctgat
gtacctcttcactatcatgccagagactggtgggcttatgctatacacggtgttcttgaa
gtaaatgtctgcccccggttacggatgtggtcatggaaacatattagagaacacaggcaa
aaaatgaagcagtataaagaactgtataaaaaaaagataacaactaagaagccaactggt
gaaattctcatgtctttggaggagttggaaaagaccttggatgtatttaatataactata
tcaagacaacaggcagaagttgaggtaaagaaagctggatataggattttcagagaagga
gcaaaagattcagaggaaaataaaggatggtttagctggctgtggacttggtcagaaccg
agaaataaagaacaaccagacgttaagcctggaattcttgaagaaatgttgacctctgaa
gaaaaaactttactctatgaagcaattggctatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagccatgaagttctttgttcacttgaaaagtatgtctattgttcta
agagaaaaacaagagacacctgagctgttagatattgtagtagaagaatttagcactttg
attgtgcaaagaccaggagcacaagccattaaatttgaaaccaaaattgattcatttcat
gttactggcttaccagataattcaacaaaaccccgcctcctttcttcattggatgatgct
acgtcactcttccaaattatatttgagataaatccattagatgaaactgttgctcaaaga
tgtatcatagaagctgaacctttagaaatgatatatgatgcaagaacagtgaatagtata
gtggaattcttcagacctccaaaagaggtaaacctagcacagctcacttcagcgactttg
acaaaacttgaagaatttcgtgacaagacagcaacaggtctactgtatattattgaaaca
cagaaagttcttgatctcaaaattaatttgaaggcttcatatgttattatcccacaaggt
ggaatatttagccctacatcaaatctactacttttggatcttggtcatctaaaggtgaca
agtaaaagtcgttcagaattgccagatatgaaaccaggtggggccagacttgaagagatc
atgcatagagcttatgattcctttgatgttcagcttacaagcatacagctgctttacagc
acagttggcgatgattggagagaagcacgaaaactcaatgtatctacacagcatattttg
gtacctatgcacttcaatgtggagctctctaaggccatggttttcatggatataaggatg
cccaaattcaagatttttggaaagttaccactgatttctttacgaatctcagataaaaaa
ctgcaaggaattttggaattgattgaaagcattccgaaacccacacctgcaactgaaaca
tatgcccctgccaaaccatttcagattcaaaggtccacttctttgggaacatcacagatt
tcacagaaaatgcttcctttcttggaacttccatgtgttgatgatgattcagaggaagaa
ttttttgatgcaccatgtagtcccttggatgaacctcttcaatctcccactgaaattcaa
agttatcagaaaaaatttcaaaagctggattgttcaaaaaatatgattcagtataaaata
agatttgaagtgccagaggttttgattcagttttatcaccttgttggagattctgaagta
cctgtggtagaagttgatgttttaggattgggcacagatgttgaacttagaacatttgat
ttgaaagcaaatgcctttttgaaagagttctgcctaaaatgcccagaacactttgatgca
aacaagaaaccaatttatttgattacaacactggataatacgatggaagatctgctaaca
ttggaatatgtgaaggctgaaaagaatctacccaacttgaaaagtacttataacaatgct
gtgcaactgattaaggtgaatttttcctctttggatattcatttacatactgaagcactt
ctgaatacaataaattattttaataatataattccacaattggaagaaaaaccagcccca
gtgtctgttacagagactgaagacaaaggagaggtcgttaaaaaaatgccgttaaaacta
tccaagaacgaagatattattaccttgcagattttagcagagttatcttgtttacagatc
tttattcaagatcagaaacgtaacattgctgaaattaagatcgaagggcttgattctgag
atcattatgaggcctgccgcaactgaaataaatgcaaagctaaggaatataattgttttg
gattctgataagacagctgtatacaaaaaggctgtttacatcactggaaaagaagttttt
agcttcaaaatgatttcttttgtggatgcaactgctggttctgcatacacagatatgaat
gtggttgacgttcaaattaatttaactgttggttgcattgaagtagtttttatcacaaaa
tttctttattctatattggcttttatagataattttcaagcggctaaacaagccttggct
gaggctactgttcaggcagcaggaatggctgctactggtgtaaaagaattggcacagagg
agttctagaatggcattggatgttaacatcaaagccccagtggtagtcatcccacagtct
ccagtttctgaaaatgtttttgttgctgattttggactaattacaatgacaaacacattc
catgtaataacagagagccagagcaaccccccacccgttattgatttgataacaataagg
ttgagtgaaatgcgactatacaggactcaatttattgatgatgcataccaggaagtacta
gatctgctattgccgttaaatcttgaggtgattgttgagcgaaatttatcttgggagtgg
taccaggaagttccttgttttaatgtaaatgctcagctaaagcccatggagttcattctt
agtcaagaagatataacaactatttttaaaacattatatagcaatatatggtatgaagaa
ggtggtggtgcctcacctgcaggactaaaagatcggaatagtgttaatagtggagctact
aatgcttcacaccatttagaaggaacaactgtagtgactgctgccgtggtagaaatacat
tcacaggcctctcaagttaagacaacactgaatatgagcttcaggaccgactatctcacc
atggtactgtatagtccaggtcctgaacagacttcctttacagatgttcgtgatccttct
ctgaaacttgctgaatttaagttggagaatatcataagcactgcaaaaatgtatacagat
gactcaacattttcttccttctcattaaaaaactgtattttagatgataaaaggcctcat
gtcaagaaggcaactcctagaatgataggactgacagttgggtttgacaaaaaggacatg
atggatgtaaagtatagaagagtcagagatggttgggtgactgatttagtccttcaagaa
acatatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttcttgaggcc
tacaccacaggcactgctgtagaaaccagtgttcagacatggactgctaaggaagaagta
tctgtacaggaatcagagaagtgggaaattaatattattattaaaaatcctgaaattgtg
tttgtggctgatatgacaagaagtgatgctcctgcattagtcattacaacacaatgtgaa
atttgttggaaaggtgaccttgagaataatacaatgactgctgccattaaagatcttcaa
gtgagagcatgcccatttcttccagtcaagagaaaaggcaaaatcactactgttttgcag
ccctgtgacttgttctatcaagctactcaaataggtacagatccacaagtgattgatata
tcaataaagtccctcacactaaaggtttcaccagttatcataaacactgtgattaccata
acatcagcactttatacatccaaggataccatcccacaagaaactacttcttctacagta
catttatgggaaaagaaggatacaaagaatttaaaaatgtggtttcttgaagaaccaaat
gaagttgaaaacaaagctcccacaactgaattgatactcaaaggagagatgataagagtg
aacattgattctatttttatagttcttgaggctggaattggtcatagaacagtgcctatg
ctgttggcaaagtcacgtttttcaggggagggcaaaaactggagttccttgataaatctc
tactgtcagcttgacctagaagtgcattattacaatgaaatgtttggtgtatgggagcct
ttgcttgaacccttagaaattgatcagactgaggattttagaccatggaatcttggaatc
aagatgaaaaagaaagcaaaaaaggccattgttgagtcagatactgaagaagaaaattac
aaagtgccagaatataaaactgttatcagtttccattcaaaagaccaactaaacattaca
ttatccaaatgtggccttgtaatgttaaataatttagtcaaggcatttacagaagctgcc
actggagcttcaactgtcttcatacgggatctagcgccatttatgattttaaattctctt
ggacttactgtctctgtttcaccaagtgattcttttagtgtacttaacgtcccattggca
aaatcgtatgtattgaaaaatgaggagagtttaagtatggactatgtgggaacgaaagac
aatgatcatttcagtgcaatgaccagcctaagcagtaaactcttcttcattcttctcaca
cctgctagccactctactgctgataaaatccctttaacaaaagtgggacgacgactgtac
actgtaagacacagagcatctggggttgaaagatcgattgtttgtcaagttgatggagtg
gaaggaagtaagaagataacaattcgctccccagtgcagattaaaaatcatttttcaatc
ccactttgtgtttatgaagggaacactttattgggaacggcttcacctggaagtgaattc
aacataccattaacatcttaccgatcacccctttctctgaagccagaagatgaggactat
caaacatgtgaaagaattgactttgaagaaattataaaaaatgatggcacttttctaaag
aagaaatgtagatctaaaaacactgctaagaaaccatttatcattcatgttgtaccggaa
aaagataatttggcttctctgtcagtgtattcagaagatggttgggacttaccatacata
atgcatttgtggccacctatcctgctccgaaatcttcttccttataaaattgcttattat
atagaggggattgaacataaagtttatactctaaatgaaggacattcagcccacatttgt
actgtgcatttggaaaaagccagactacatttaaaattacttgactatcttaatcatgat
tggaaaagtgaatatcatataaaacctaatcagcaagatattagtttcatcaattttacc
tgtgttacagaaatagaaaagactgatttagatattgctatccacgtgacttataatatt
ggccagacagttgtggcatttcatagtccttattggatggtcaataaaaccagtcgaatg
ttacagtataaagcagatggaattcatcgaaagcatccacctaattataaaaagccagtt
ctgttttcttttcaaccaaagcacttttttaataataataaggttcagcttatggtaact
gatagtgaattgtcggatcagttttcaattgatactgttggtagtcatggagctgttaaa
tgtaaaggcctgcaaatggactatcaagttggtgtcactatagacctcagcagttttaat
attaccagaattgtgacatttactcctttttatatgatcgaaaacaaaagcaaatatcat
atatcagtggctgaacacggaaatgataaatggctctctcttgatttggagcagtgtatc
cccttttggcctgaggatgcttctaatgcacttcttattcaagttgaaagaaatcaaggc
cctcccaaaaagatacattttaacaagcaagcaaattgtattttattgcgtctggacaat
gagcttggaggtattatagcagaagttaatttggctgagcattctacagttattacattt
tcagattatcatgatggagcagctccattcctattaataaatcacaccaagagtgacatt
gttcagtacaatcaaagttctctcagtgaaatagaagattccctccctcctggaaaagca
gtattttatacatgggctgatccagtgggctctagaaagctgaagtggagatgtggaaaa
agccatggtgaagtagcacaaaaggatgatatgatgacacctataaattcggggaaaaag
accatttatttagtttcattctttgaaggcttacaacgcattattttattcactgaagat
ccaagggtatttaaagcaacatatgaaagtgagaaagcagagttagcagagcaagaaatt
gtgttggccttacaagatgttggaatttctctcgtcaacaattacacaaagcaagaagta
gcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaaggca
agatggaagccaatgagtgtaaagcacactgagaagttagagaaagaatttaaggaatat
actgaatcttcaccttcagaagataaggttattgaattggacactaacattccggttcgc
ttcacacctagtggtactaacatgaaaattctgcagccacatgtaatagctataagaaga
aattatcttccagcattgaaagtagaatatagcacatccgcacatcagtcatcatttaga
attcaagtttacagaatacagatccaaaaccagatacatggtgctatatttccatttgtg
ttttatccaattaaacctcccaagtcggtcaccatggattcagctccaaagccctttaca
gatgtcagtattgtcatgagatctgcagggcattcccagatatcacgtattaagtatttc
aaggtgttgatccaagaaatggacctcaggttagatcttgggtttgtctatgctttagca
gaacttatgacagaagctgaagtgactgaaaaaaccgagatcgaactttttcataaagat
atagaagctttccaagaagaatataaaacagcttcattagcagattcatcacaagtcagt
ctctatgaatacttccatatatctcctatcaagttgcatttaagtgtttcactgagttcc
ggcaaagaagctaaagattcagaacaacaggaaggactgatggctgttcgttctttaaat
cttttgctgaagagtattggtgccacccttacagatgtacaagatgtagtttttaagctt
gcattttttgaactgaactatcagttccatacagcatctgaactacagtctgaagtaata
agacactattcaaaacaggccattaagcaaatgtatgtactcattcttggacttgaagtt
ttgggaaatccctttggcttgattagagaattttctgaaggtgtggaagcgtttttttat
gaaccgtaccagggagccatccagggtcccgaagagtttgtggaggggatggcattggga
ctgaaggcactagttggtggagctgttggtggattagctggtgctgcctccaaaatcacc
aatgctatggctaagggggtggcagccatgactctggatgaagactatcaacagaagaga
agagaggccatgaataagcaaccagctggtctcagagaaggcatcactcgtggaggaaaa
ggcttagtgtctggttttgtaagtggcataacaggaattgttacaaaaccaatcaaagga
gctcaaaaagaaggagcagctggtttctttaaaggtgttgggaaaggtttagttggagca
gtagcaaggccaacgggaggcatcatagacatggccagcagtacatttcagggaataaaa
agagctacagagacttctgatgaagtggagagcctgcgaccccctcgattctttaatgag
gatggagttatcagaccttacaggttgagggatgggactggaaaccagatgttacaggtc
atggaaaatgggagatttgcaaaatacaagtattttacccatgtcatgatcaataaaaca
gatatgttaatgatcactaaaagtggtgtattgtttgtaacaaaaggaacatttggacag
cttacatgtgagtggcagtacagttttgatgagtttaccaaagagccgttcattgttcac
gggaggagattacgcattgaagcaaaggaacgggtgaagtctgtgtttcatgccaaagag
tttggaaaaataattaacttcaagaccccagaggatgctaggtggatcctcacaaaacta
gaagaagcaagagaaccttccccaagattctga
DBGET
integrated database retrieval system
