Odobenus rosmarus divergens (Pacific walrus): 101386064
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Entry
101386064 CDS
T05148
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101386064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oro03041
]
101386064
Spliceosome [BR:
oro03041
]
Complex A
U1 snRNP components
U1 related factors
101386064
Complex B
101386064
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
WW_2
Motif
Other DBs
NCBI-GeneID:
101386064
NCBI-ProteinID:
XP_012423675
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MMRPGTGAEHGGFMMGHPGMHYAPMGMHPMGQRANMPPVPHGMMPQMMPPMGGPPMGQMP
GMTSSVMPGMMMSHISQASMQPALPPGVNNMDVAAGTTSGAKSMWTEHKSPDGRTYYYNT
ETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTIESRWAKPKELEDLEGY
QNTIVAGSLIRKSNLHAMIKAEESCKQEECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVI
AAATAAAAATTAAAAANASASTFASNTVSGTGPVVPETEVTSIVATVVDNENTVTISTEE
QAQLTSTPAVQEQSMEVSSNTGEETAKQETVADFTPKKEEEESQPAKKTYTWNTKEEAKQ
VFKEFLKEKWVPSNASWEQAMKMIINDPPYSALAKLREKKQAFNAYKVQTEKEEKEEARS
KYKEAKESFQCFLENHEKMTSTTRYKKAEQMFGEMEVWNAILKRDRLEIYEDVLFFLSKK
EEQAKQLWKRNWEALKNILDNMANVTYSTTWSEAQQYLMDNPTFAEDEELQNMDKEDALI
CFEEHIXALEKEEEEEKQKSLLRERRRQLKNKESFQIFLDELHEXGQLHSMSSWMELYPT
ISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGLVVEVNTTFKDX
IISSTKRSTTLDARNIKLAFNSLLEKAEAREREREKEEAWKRKESAFKSMLKQATPPIEL
DAVWEDIRERFVKEPAFEDITLESERKXIFRDFMHVLEHECQHHHSKNKKHSKKSKKHHR
MKRSCSRSGSDSDDDSHSKKKRQQSESRSASENSSSAESERSYKKSKKHKKKSKKRRHKS
DSPESDAEQEKDKKEKDRESEKDRTRQRSESKHKSPKEKTGKDSGNWDTSGSELSEGELE
KHRRTLLEQLDDDQ
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggccggggacgggagcggagcatggaggcttcatgatggggcaccctggcatg
cattatgccccaatgggaatgcaccctatgggtcagagagcgaatatgcctcctgtacct
catggaatgatgccacaaatgatgccccctatgggagggccgccaatgggacaaatgcct
ggaatgacgtcttcagtaatgcctggaatgatgatgtctcatatatctcaggcttccatg
cagcctgccttaccgccaggagtaaataatatggatgtagcagcaggtacaacatctggt
gcaaaatcaatgtggaccgagcataagtcacctgatggaaggacttactactacaatact
gaaacaaaacagtctacgtgggagaaaccagatgatctgaaaacaccggctgagcaactt
ttatctaaatgtccctggaaggaatacaaatctgactctggaaagccttactattataat
tctcaaacaatagaatcccgctgggccaaacctaaagaacttgaggatcttgaaggatac
cagaataccattgttgctggaagtcttattagaaaatcaaacctgcatgcaatgatcaaa
gctgaagaaagctgtaagcaagaggagtgcaccacaacatcaacagccccggttcctaca
acagaaattccgaccaccatgagcaccatggctgctgcggaagcagctgccgctgtcatt
gccgccgccaccgccgctgccgccgccaccaccgccgccgccgcagccaatgccagtgct
tccacctttgcttcaaacactgtcagtggaactggtccagtcgttcccgagacagaagtt
acttcgattgttgctactgttgtagataacgagaatacagtgacaatttcaactgaagaa
caagcacaacttactagtactcctgctgttcaggaacagagtatggaagtatccagtaat
actggagaagaaacagctaagcaggaaactgtagctgattttactcccaaaaaagaagag
gaggaaagccaaccagcaaagaaaacctatacttggaatacaaaggaagaggcaaagcaa
gtgtttaaagaatttttgaaagaaaagtgggtaccatctaatgcttcatgggaacaagct
atgaaaatgatcattaatgatccaccatacagtgctttagcaaagctgagagaaaaaaag
caagcctttaatgcttacaaagtccagacagagaaagaagaaaaagaagaagcaagatca
aaatacaaagaggctaaggaatcctttcagtgttttcttgaaaatcatgagaaaatgact
tccacaaccagatacaaaaaagcagagcaaatgtttggagagatggaagtctggaatgca
atattgaaacgtgatcgtcttgaaatctatgaagatgttttattctttctttcaaaaaaa
gaagagcaagcaaagcagttatggaagagaaattgggaagccttaaaaaacatacttgac
aacatggctaatgtaacatactctactacctggtctgaagcccagcagtatctgatggat
aatccaacttttgcagaagatgaggaattacagaacatggataaagaagatgcattaatt
tgctttgaagaacacatctgagctttagaaaaggaagaagaagaagaaaaacagaagagt
ttgctgagagaaaggagacgacagcttaaaaataaagaatcttttcagatatttttagat
gaactgcatgaangtggacaactgcattctatgtcatcttggatggaattgtatccaaca
attagttctgacattagatttactaatatgcttggtcaaccgggatcaactgcacttgac
cttttcaagttttatgttgaggatcttaaagcacgttatcatgatgagaagaaaataata
aaagacattctaaaggataaaggattggtagttgaagtaaatacgactttcaaagacnnc
ataatcagttcaactaaaaggtcaaccacattagatgccagaaatattaagttggctttc
aacagtttactagaaaaggcagaagctcgtgaacgtgaacgagaaaaagaggaggcttgg
aaacgaaaagaatctgcatttaagagtatgttgaaacaagctactcctcctatagaattg
gatgctgtctgggaagatatccgggagagatttgtaaaagagccagcatttgaggacata
actttagagtctgaaagaaaatgaatatttagagattttatgcatgtgcttgagcatgaa
tgtcaacatcatcattcaaagaacaagaaacattctaaaaaatctaaaaaacatcacagg
atgaaacgttcctgctctagatcgggatcagattcagatgatgacagccattcaaagaaa
aaaagacagcaatcagagtctcggtctgcttcagaaaattcttctagtgctgagtctgag
agaagttataagaagtcaaaaaaacataagaagaaaagcaagaagaggagacataaatct
gactctccagagtcagatgctgagcaagagaaggataaaaaagaaaaagaccgagaaagt
gaaaaagacagaactagacaaagatcagaatcaaaacacaaatcacctaaggaaaagact
ggaaaggattctgggaattgggatacttctggcagtgaactgagtgaaggggaattggaa
aagcacagaaggacccttttggagcaactggatgatgatcaataa
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