Odobenus rosmarus divergens (Pacific walrus): 101386190
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Entry
101386190 CDS
T05148
Symbol
VPS39
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
oro
Odobenus rosmarus divergens (Pacific walrus)
Pathway
oro04140
Autophagy - animal
oro04148
Efferocytosis
oro05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oro00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101386190 (VPS39)
04148 Efferocytosis
101386190 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101386190 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oro04131
]
101386190 (VPS39)
Membrane trafficking [BR:
oro04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
101386190 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
DUF4145
Hira
Motif
Other DBs
NCBI-GeneID:
101386190
NCBI-ProteinID:
XP_004400452
UniProt:
A0A2U3VY67
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDAVPTDVASPESSSCN
RFEVTLEKSNKNFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLF
TCDLQHTETGEEVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVG
FKRDYYLIRVDGKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCA
LNWTDIPVAMEHQPPYIVAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASN
HFVWRLIPVPMATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFNLFCQK
RFDESMQVFAKLGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPVLSGAELEKAHLALIDYL
TQKRSQLVKKLNDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLL
RLENNHCHIEESEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTV
QYLQHLGTENLHLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLA
IPYLEHVIHVWEETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEY
RRKLLMFLEISGYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAE
EYCHKHYDQNRDGSKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHS
KLDTTKAINLLPANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQ
QVKCIITEEKVCMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgagccagtgccaatactagaaaagctgcctctgcagatcgactgt
ctggctgcctgggaggaatggcttcttgttggcaccaaacaaggacatcttcttctctat
aggatccggaaggatgctgtgccaactgatgtagcatctcctgagagcagcagttgcaac
aggtttgaagtgacattagagaaatccaataaaaacttctccaaaaagattcagcagatc
cacgtggtttcccagtttaagattctggtcagcttgttagaaaataacatttatgtccat
gacttactgacatttcaacaaatcactacggtttcaaaggcaaagggagcctcactgttc
acatgtgacctccagcacacagagaccggtgaggaggtgctgcggatgtgtgtggccgtc
aaaaagaagctgcagctctacttctggaaggacagggaattccatgaattgcagggggac
tttagtgtaccagatgtgcccaagtccatggcctggtgcgaaaattctatctgtgtgggt
ttcaagagagactactacctaataagggtggatggaaaagggtccatcaaagagctcttt
ccaacaggaaaacagctggagccgttagttgcacctctggcagatggaaaagtggctgtg
ggtcaggatgatctcaccgtggtgctcaatgaggaggggatctgcacacagaaatgtgcc
ttgaactggacagacataccagtggccatggagcaccagcctccctacatcgttgcagtt
ttgcctcgatatgtggagatccgaacatttgaaccaaggcttctggtccagagcattgaa
ttgcaaaggccccgcttcattacctcgggaggatcaaacattatctatgtggccagcaat
cattttgtttggagactcattcctgtccccatggcaacccaaatccaacagcttctccag
gacaagcagtttgaattggctctacagcttgcagagatgaaagatgattctgacagcgaa
aagcagcaacagatccatcacatcaagaacttgtatgccttcaatctcttctgccagaag
cgttttgatgagtccatgcaggtctttgctaagcttggcacagatcctacccatgtgatg
ggcctgtacccagacctgctgcccacagactacaggaagcagctgcagtatcctaacccg
ctgcctgtgctctcgggggctgaattggagaaggcgcacttagctttgattgactacctg
acacagaaacgaagccagttggtaaagaagctgaatgactctgatcaccagtctagcacc
tccccgcttatggaaggcactcccaccatcaaatccaagaagaagctgttgcaaatcatt
gacaccaccctgctcaagtgctacctccatacgaatgtggccttggtggcccctctgctg
cgcctggagaacaaccactgccacatcgaggagagcgagcacgtgctgaagaaggcgcac
aagtatagtgagctgatcatcctctacgagaagaaggggctccatgagaaagctctgcag
gtgctggtggaccagtccaagaaggccaactcgcctctgaaaggccacgagaggacagtg
cagtatctgcagcatttgggcacagaaaacctgcatttgattttttcctactcagtgtgg
gtgctgcgagacttcccagaggatggcctgaagatctttaccgaagacctcccggaggtg
gagtctctgccgcgtgaccgagtgctcggcttcttagtggagaattttaagggtctggct
attccttatctggaacatgtcatccacgtttgggaggagacaggctctcggttccacaac
tgcctgatccagctgtactgtgagaaggtgcaaggtctgatgaaggagtatctcctgtcc
ttccctgcaggcaaaactccagttcctgctggagaggaagagggtgagctgggagagtac
cgacggaagctccttatgttcttggaaatttctggctactatgatccaggccggctgatc
tgtgactttccttttgacggcctcttagaagagcgcgcactgctgctgggccgcatgggg
aagcacgagcaagcgctcttcatctatgtgcacatcctgaaggacacaaagatggccgag
gagtactgccacaagcattacgaccaaaacagagatggcagcaaagacgtgtatctgtcc
ctgctccggatgtacctgtcgccccccagtgttcactgcctgggaccaatcaagctggaa
ctgctggagccacaggccaacctccaggccgccctgcaggtccttgagctgcaccatagc
aagctggacaccaccaaggccatcaaccttctaccagcaaacactcagattaacgatata
cgcatctttctggaaaaggtcttggaagaaaatgcacaaaaaaaacggttcaatcaagtg
ctcaagaaccttctccatgcagaatttctgagggtccaggaagagcggattttacaccag
caggtgaagtgcatcatcacagaggagaaggtttgcatggtgtgtaagaagaagattggg
aacagtgcatttgcaagataccccaacggagtggtcgtgcactacttctgttccaaagag
gtcaacccggctgacacctga
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