Occallatibacter riparius: MOP44_11215
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Entry
MOP44_11215 CDS
T08486
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
orp
Occallatibacter riparius
Brite
KEGG Orthology (KO) [BR:
orp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
orp03016
]
MOP44_11215
Enzymes [BR:
orp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MOP44_11215
Transfer RNA biogenesis [BR:
orp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MOP44_11215
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
RNase_II_C_S1
S1
Motif
Other DBs
NCBI-ProteinID:
UWZ86490
UniProt:
A0A9J7BX86
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All DBs
Position
2774729..2776222
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AA seq
497 aa
AA seq
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MQTTHSTQPVHFNLVAAAHAAMLEHGFQPDFPDGTDGELTAILAEKTPPSASPRFRSDFV
DLRSLLWSSIDNDTSKDLDQIEWAERLPDGRMRVLVGVADVDSRVVRGSLIDTHARSETT
SVYTGVKVFPMLPPELSEGITSLNEDEERAAIVIEYCVDDAGAVSGGKAYRALVRNRAQL
AYNGVGAWLEDRGPAPAKVAANRELAAQLKLQDEAAQRLVGSRYQHGALDLETVETHPVM
HADEAVDLARMEKNRATSLIEEFMVAANGVLARTFDGAKVASIRRIVRTPKRWDRIVELA
EGLGHMLPKEPDSKALNDFLQTQKEKDPEHFPDLSLAVVKLMGPGEYVLVRPTDPDPGHF
GLAVQDYTHSTAPNRRFPDMVAQRILKAVIGSTAQPYSEEELNAIAERCTLMENMARKVE
REMQKRIAAVVLHPRIGQVFRAIVTGVNEYGTFVRSLDPHVEGKLIRGGKGLDVGDRLQA
RLIGTDPARGFIDFAAL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccacgcactccacccagcccgtgcatttcaatcttgtggctgcggcacatgcg
gccatgctcgagcacggatttcagcctgatttcccggatggaacagacggggagctgaca
gcgattcttgccgagaagactccgccgtccgcgtcgcccagatttcgcagcgatttcgtc
gacttgcgcagcctgctctggtcatcgatcgacaatgacacgtcgaaggacctggaccag
attgaatgggccgagcggctgcccgacggcaggatgcgcgtactcgtaggtgtcgccgat
gtcgattcgcgcgttgtgcgcgggtcattgatcgatacgcacgcacggagtgagaccacg
tcggtttacacgggggtcaaggtgtttccgatgctgccgccggagctctccgagggcatt
acctcgttgaacgaagacgaggagagagcggctatcgtcatcgagtactgcgtggacgat
gccggcgcggttagtggaggcaaggcttatcgcgcgctggtgcgtaatcgcgcacagctc
gcttacaacggtgtgggtgcgtggctcgaggatcgagggccggcgcctgcgaaggtagcc
gctaatcgcgaacttgccgctcagctcaagctgcaggatgaagcagcgcagcgcctggtg
ggaagccgttatcagcacggagcgctcgatctggagacagttgagactcaccctgtcatg
cacgccgatgaagcggtcgaccttgcgcggatggagaagaaccgcgctacctcgctgatc
gaggagttcatggtcgcggccaacggggtgctcgcgcggacctttgacggcgcgaaggtg
gcttccatccggcggattgtgcggacgccgaagaggtgggatcggattgtggaactcgcc
gaggggttggggcacatgctgcccaaggagccggattcgaaggcgctcaacgactttctg
cagacgcagaaggagaaggatccggagcactttccagatctgtcacttgcggtggtgaaa
ctgatggggccgggtgagtatgtgctggtgcggccgactgatccggaccccgggcatttt
ggcttggcggtgcaggactacacgcattcgacggcgccgaaccggcgttttcctgacatg
gtggcgcagcggattctgaaggcggtgatcggatcgacggcgcaaccttattcggaagaa
gaactcaacgcgattgccgagcggtgcacgctgatggaaaacatggcgcggaaggtggag
cgcgagatgcagaagcggattgcggcggtggtgctgcatccacggatcgggcaggtgttc
cgggctatcgttacaggcgtgaacgagtacgggacttttgtgcgaagcctcgatccgcac
gttgaagggaaattaatcagaggcggaaaaggattggacgtaggagatcggcttcaggcg
cggctcatcgggaccgatcctgcgcgggggtttatcgacttcgcggcgttgtga
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