Occallatibacter riparius: MOP44_17025
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Entry
MOP44_17025 CDS
T08486
Name
(GenBank) DEAD/DEAH box helicase
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
orp
Occallatibacter riparius
Brite
KEGG Orthology (KO) [BR:
orp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
orp03019
]
MOP44_17025
Enzymes [BR:
orp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MOP44_17025
Messenger RNA biogenesis [BR:
orp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MOP44_17025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_19
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
UWZ87034
UniProt:
A0A9J7BY65
LinkDB
All DBs
Position
complement(4202567..4204897)
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AA seq
776 aa
AA seq
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MASRQLPLPVDSLLPEIVASLARTPNLVLEAEPGAGKTTRVPPALLNAVTGDVLVLEPRR
IAARLAAKRVAWELGEELGQTVGFQVRFERIAGPQTRLHFLTEGVLTRRLLSDPELEGVD
AVVLDEFHERHLETDLALALLRRLQQRRPDLRIVVMSATLDTGPVAQFLGGCPVLKSSGK
VFDLTIEHTDYSAAPLHEQVRNALEQVLREPDAGEVLVFLPGAAEIRRAAAGCEPVARAC
NRLLLPLYGDLPTSEQDRAVAPATQAKVILSTNVAESSITIDGVQTVIDSGLARMASYSP
WTGLPTLRVGRVSKASARQRAGRAGRTAPGRVIRLYSQMDYQGRADFDTPEILRSDLTQM
CLALRAMGIRDPNDIAWLDAPPAEAIDHAEKLLERLAATEADARELMRLPLHPRLSRMIE
AASERGAGRPACIAAAILASGERVQHNDLLDALDEPLGSAAQQQLRHLLRIAKPHRPNTH
DDNPLLQAVLLGFPDRVAQHKGGNQVMLASGKAAEIVGKPPSSQLLVALDVEDRTEKPLP
QVRLFARIEPEWLLDYFPEHVRDETAVIWNRQAERVDAASRLLYDELILQESIAAPDADA
AATLLADKAMEAGIGRFVDADLIEDLAGRLEFAGVAPAEIQQSFRAFCVGRRSFAELKKD
GASFVPWLEQRFEPHILRENAPRTLRLRGGRQVKIHYEPGKTPWIASRLQDFFGMDETPR
IGPRRVPVVLHLLAPNQRPVQTTTDLAGFWERLYPQVRRELMRRYPRHAWPENHRG
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgccagcttcctttacctgtcgattcccttctccctgaaatcgtcgcatcg
ctcgcgcgcacgccaaacctcgtcctggaggcggagccgggcgccggcaaaacgacgcgc
gttccgccagccttgctcaacgcggtcaccggcgacgtgctggtcctggagccgcggcgc
atcgccgcgcggctggccgcaaagcgcgtggcatgggaactgggcgaagagctgggccag
acagtcggctttcaggtccgcttcgagcgcattgcaggcccgcaaacccgactccacttc
ctgacggaaggggtgctgacgcgtcgccttctctccgacccagaactcgaaggcgtggac
gccgtcgttctcgacgaattccacgagcggcatcttgaaaccgacctcgccctggctctg
ctgcggcggctgcaacagcgtcggcccgatcttcgcattgtcgtgatgtcggctacgctc
gacaccggccccgttgcgcagtttctcggtggctgcccggtcctcaaatcaagcggaaag
gtcttcgatctaactatcgaacataccgactactccgccgcgccgctgcacgagcaggtg
cggaatgcgttggaacaagtccttcgcgagccggatgcgggcgaggtcctcgtcttcctt
ccaggcgcggcagagatccgccgagccgccgcgggatgtgagcctgttgcccgcgcatgc
aaccgcctgttgctgccgctctacggcgacctgcccacgtccgagcaggatcgtgcagtg
gctcccgcaacacaggccaaggtgattctctcgacgaacgttgccgagagttcgatcacg
atcgatggcgtgcagaccgtaatcgacagcggcttggcccgcatggccagctactcaccg
tggaccggcctgccgactctccgagtgggtcgcgtgagcaaagcctctgctcgccaacgc
gctgggcgcgccggacggacggcgccaggccgtgtcatccggctctactcccagatggac
taccaggggcgcgccgatttcgatactcccgaaatcctgcgcagcgatctgacccagatg
tgcctagccctgcgcgccatggggattcgtgatccaaacgacatcgcatggctggatgca
cctcccgccgaagcaatcgatcacgccgagaagctgctggagcgccttgcagccacagag
gcagatgcgcgcgaactcatgcgcttgcccctccatccgcgcttatcgcgcatgatcgaa
gccgcctccgagcgaggtgcaggccgccctgcttgcattgctgctgcgatactggcttcc
ggcgagcgcgttcagcacaacgatcttctcgatgcccttgatgagccgctcggcagtgca
gcccagcagcaactgcggcatctgttgcggatcgccaagccgcaccggcccaacacgcac
gacgacaatccgctgctgcaagccgtattgcttggctttccagatcgcgttgcgcagcac
aaaggcggcaaccaggtcatgctcgcgagcggcaaagcagcggagatcgtcggcaaaccg
ccatcctctcaactgctggttgcgctcgacgtagaggaccgcaccgagaagcctctgccg
caggttcgtctcttcgcccgcatagagcccgagtggcttctcgactactttcccgagcat
gttcgcgacgaaacagcggtcatctggaaccgccaggcagagcgcgtagatgcagcaagc
cggctcctctatgacgagttaattctgcaggaatcgatcgccgcgccagatgccgatgca
gcagctacgctattggcagacaaagccatggaagcaggaatcggccgcttcgtcgacgcg
gacctcatcgaagaccttgccggacgactcgagttcgccggcgttgctcctgcggaaatc
cagcagagcttcagagcgttctgcgtgggccgccgcagctttgccgagttaaagaaagat
ggcgcgagctttgtgccgtggctcgagcagcgattcgaaccgcacatcctgcgtgaaaac
gcacctcgcactctgcgcctcagaggcggccgccaggtgaagatccactatgagcccggc
aagaccccgtggatcgcatcccgcctgcaggacttcttcggcatggatgaaactccgcgc
atcggcccgcgccgcgtgccggtagtgctgcatctgcttgcgcccaatcagcgaccggtg
cagacaacaaccgacctcgccggattttgggagcgcctctatccgcaggtacgccgcgaa
ctcatgcgccgttatccaaggcacgcgtggcctgaaaatcatcgcggctga
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