Occallatibacter riparius: MOP44_20430
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Entry
MOP44_20430 CDS
T08486
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
orp
Occallatibacter riparius
Pathway
orp02020
Two-component system
orp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
orp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MOP44_20430
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MOP44_20430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
orp03021
]
MOP44_20430
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
orp02035
]
MOP44_20430
Transcription machinery [BR:
orp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MOP44_20430
Bacterial motility proteins [BR:
orp02035
]
Flagellar system
Flagellar assembly proteins
Stator
MOP44_20430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
UPF0154
Motif
Other DBs
NCBI-ProteinID:
UWZ82925
UniProt:
A0A9J7BP62
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All DBs
Position
5040786..5041652
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AA seq
288 aa
AA seq
DB search
MGMLDSGYTAAVQGQAVRRGMPLTGSYPPSGSNAGMTAEQERMLLEHLPVVRFLARRIHE
RLPQHVEIEDLVSAGVVGLLDAFAKFDPEKKVQFRSYAQFRIRGAILDSLRTLDWSPREL
RRKGRAVEEAIRVLTARMGRPPHENEVAQEMDLSLDEYQQLLGDLKGLEIGTLHMERNED
SGEEELAYVPGNPEEDPLFRCLRGELAERLTDAIQNLPDRERLVMTLYYFEEMTMREIGL
ALGVVESRVSQIHASAVIHLRSALKDLAAKGAFERNGRKRLNKRTLAS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggggatgctcgattcagggtatacggctgcagttcaaggccaggcagttcgtcgcggg
atgccgcttacaggaagttatccgccgtccggcagcaatgccggaatgactgcggagcag
gaacgaatgctcctcgagcatctgcccgtggtgcgttttctggcgcgcaggattcatgag
cggctgccgcagcacgtcgaaatcgaagatcttgtttcggcgggtgtagtcgggttgctc
gacgccttcgccaagttcgatcccgaaaagaaggtccagttccgcagctacgcgcagttc
cgcatccgcggcgccattctcgacagcctgcgtaccctcgactggagcccgcgcgagttg
cgccgcaagggccgcgcggtcgaagaagccattcgcgtcctgacagcccgcatgggtcgt
ccgccgcacgagaacgaagtcgcccaggagatggatctgtcactcgacgagtatcagcaa
ttgctcggtgacctgaagggtctcgaaatcggcacgctgcacatggagcgtaacgaagac
tcaggcgaagaagagctcgcctacgttcctggtaatcccgaggaggatccactcttccgg
tgcctccgcggtgaactcgcagagcggctcacggatgccattcagaatctgcccgaccgc
gagcggctggtgatgaccctctactacttcgaagagatgaccatgcgcgagatcggcctg
gcgctcggagtggttgagtcgcgcgtctcacagattcacgcctcggccgtgatccacctg
cgttcggccctgaaggacctggcggccaaaggcgcgttcgaacgcaacggcaggaagcgg
ctgaacaagcggacacttgcaagctag
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