Occallatibacter riparius: MOP44_24105
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Entry
MOP44_24105 CDS
T08486
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
orp
Occallatibacter riparius
Pathway
orp03030
DNA replication
orp03430
Mismatch repair
orp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
orp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOP44_24105 (dnaE)
03430 Mismatch repair
MOP44_24105 (dnaE)
03440 Homologous recombination
MOP44_24105 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
orp03032
]
MOP44_24105 (dnaE)
03400 DNA repair and recombination proteins [BR:
orp03400
]
MOP44_24105 (dnaE)
Enzymes [BR:
orp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MOP44_24105 (dnaE)
DNA replication proteins [BR:
orp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MOP44_24105 (dnaE)
DNA repair and recombination proteins [BR:
orp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MOP44_24105 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Qn_am_d_aIII
Motif
Other DBs
NCBI-ProteinID:
UWZ83638
UniProt:
A0A9J7BRT9
LinkDB
All DBs
Position
complement(5899305..5902841)
Genome browser
AA seq
1178 aa
AA seq
DB search
MAEFTHLHLHTEYSLLDGACDVKKLVDRVSKLGQKSVAMTDHGNIYGAVHFFNAAKEKGI
KPILGCELYVCKNEDHRAPAQGDDYNHLLVLAENEEGYRNLIRITSEASLYGFYRKPRIS
KQYLAAHSEGLIATSGCLSGELCEYLHNEHGKWDAATGYAKAKATALQYQDIFGKGNFYL
EIQDQGLEAERKIQNDLFRLEKELDIPMLVTNDSHYLCGEDSHAHDVMLCVQTGAKIHDN
DRFKFDSDQFFVKSGDEMARLFPDNPSLLSRTMEIAERCNFKLHPVDNPFPQMDVPEGHT
VDSYFELICREGFKKRRDTAIGHLQATGQLRKSLAEYEARLNYEIGIIHQMKYSGYFLIV
WDFIKYARDHGIPVGPGRGSGAGSLVAYCMEITNIDPMQNVLLFERFLNPERVSMPDIDV
DFCMNRRGEVINYVVGKYGREQVSQIITFNTMAAKGSIKDCGRALDMPYGDVDRIAKLIP
ATVGMTIDKALEEVPDLAKIYETEQPVRELIDTAKKLEGLVRGQGVHASAVVIAPRALTE
LVPVARTKNDEIVTAYDMVAVEKMGLLKMDFLGLATLTVIEDCLTLIKQNRGIDVDIEKI
PLDDEETFKKVFQAALTSGVFQFESSGMRDMLRRYKPEKLEELTALTALFRPGPIQGGMM
EDFIERKWGRRKVEYMLPELETLLKETLGVIVYQEQVMQIANVLASYSLGEADLLRRAMG
KKKPEEMAKQRDRFISGAVANGHPKDISAELFDQMEKFAGYGFNKSHSAAYGLVSYQTAY
LKTHYPTEFMAGLLTSEVSKPENVVKYIAECKEMGIAVEPPDVQISGAQFTPHGDAIRFG
LAGIKNVGGNAIESIMKAREEVGGRFESLWQFCEKVDLRVMNKRVIESLIKAGALDSLGK
RAALYGAVDKAMERAQKAQRDREQGQHGLFGLFDDTPAHGQKNGDDLPKVPDWEEGERLA
NEKEVLGFFVSGHPLDKYAEKLRNLPGIISVAEALERKPPERVWGKQSDPTDEIQVAGTL
LGMAPRKSKRDGKIYAMGHLEDASGKIDVICFSRDYERLGEQLKTEAPVVIRGVLMGEED
SAPKISISGVQPLDAMKVKLPGGIRIRINLDRATEEIFATLKSAADAAPGPGKVMLQLEQ
KGQFAVILEPDQMAVAADKGWIERVEDLTGRGTVQIVG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatttacccacctccatctgcacaccgagtactccctcctcgacggcgcctgc
gacgtcaaaaagctagtcgaccgcgtctccaagctcggccagaagtccgtcgccatgacc
gaccacggcaacatctatggcgccgtacacttcttcaacgccgcgaaagagaagggaatc
aagcccatccttggctgcgagctctacgtgtgcaagaacgaggaccaccgcgctcctgcc
cagggcgacgactacaaccacctcctcgtcctcgcggaaaacgaagagggctaccgcaac
ctcatccgcatcacgtctgaggcctccctctacggcttctatcgcaagccgcgcatcagc
aagcaatatctcgccgcgcactctgagggcctcatcgccacctccggctgcctctcgggc
gagctctgcgagtacctccacaacgagcacggcaaatgggacgccgccaccggctacgcc
aaggccaaagccacagcccttcagtaccaggacatcttcggcaagggcaacttctatctg
gaaattcaggaccagggcctcgaagccgagcgcaagatccagaacgatctcttccgcctc
gaaaaagaactcgacatccccatgctggtcaccaacgactcgcactacctctgcggcgaa
gactctcacgcccacgatgtgatgctctgcgtccagaccggcgctaagatccacgacaac
gaccggttcaagttcgactctgaccagttcttcgtcaaatccggcgacgaaatggcgcgc
ctcttccccgacaatcccagcctcctctcccgcaccatggagatcgccgagcgctgcaac
ttcaagctgcaccccgtcgacaatcccttcccgcagatggatgttcccgaaggccacact
gtcgacagctacttcgagctcatatgccgcgagggattcaagaagcgccgcgacaccgcc
atcggccacctccaggccaccggccagttgcgcaagtccctcgccgagtacgaggcacgc
ctcaattacgaaatcggcattatccaccagatgaagtactcaggctacttcctcatcgtc
tgggacttcatcaaatatgcgcgcgaccacggcatccccgttggccccggccgcggatcg
ggcgcaggttcgctcgtcgcctattgcatggagatcaccaacatcgatcccatgcagaac
gtcctcctcttcgagcgcttcctcaaccctgagcgcgtgtccatgcctgatatcgacgtc
gacttctgcatgaaccgccgcggcgaagtcatcaactacgtggtgggcaaatacggccgc
gagcaggtcagccagatcatcaccttcaacaccatggccgccaagggctccatcaaagac
tgcggccgcgccctcgacatgccctatggcgacgtcgatcgcatcgccaagctcattccc
gccaccgtcggcatgaccatcgacaaggcgctcgaagaagtgcccgacctcgccaaaatt
tacgagaccgagcaacccgtccgcgagctcatcgacactgccaaaaaactcgaaggcctc
gtccgcggccagggcgtgcacgcctccgctgtcgtcatcgctccgcgcgcgctcactgaa
ctcgtccccgttgcaagaacgaaaaacgacgaaatcgtcaccgcctacgacatggtggcc
gtcgaaaaaatgggcctgctcaagatggactttcttgggctcgccaccctcaccgtcatc
gaggactgcctcacgctcatcaagcagaaccgcggcatcgacgtcgacatcgaaaagatc
ccgctcgatgacgaagagacattcaagaaagtcttccaggcggccctcacctcgggcgta
ttccagtttgaatcaagcggcatgcgcgacatgctccgccgctacaagcctgaaaagctc
gaagagctcaccgctctcacagcgctcttccgccccggccccatccagggcggcatgatg
gaagacttcatcgagcgcaagtggggccgtcgcaaagtcgagtacatgctacccgagctg
gaaaccctgctcaaggagaccctcggcgtcattgtctaccaggaacaggtcatgcagatc
gccaacgtcctcgccagctactcgctcggcgaagccgacctgctccgccgcgccatgggc
aaaaagaagcccgaagaaatggccaagcagcgcgatcgcttcatctccggtgcagtcgcc
aacggccaccccaaagacatctccgccgagctcttcgaccagatggagaagttcgcgggc
tacggcttcaacaagtcgcactccgccgcctacggtctcgtctcctatcagaccgcctat
ctcaaaacgcactaccccaccgaattcatggccggcctgctaacctcggaagtctccaag
cccgagaacgtcgtcaaatacatcgctgagtgcaaggagatgggcatcgccgtcgagccg
cctgacgtgcaaatctccggcgcgcaattcacgccccacggcgacgccatccgcttcggt
ctcgccggaatcaagaacgtcggcggcaacgccatcgaatccatcatgaaggcccgcgaa
gaagtgggtggccgcttcgaaagcctctggcaattctgcgagaaggtcgacctgcgcgta
atgaacaagcgcgtcatcgagtcgctcatcaaagccggtgccctcgactcgctcggcaag
cgcgccgccttgtacggcgcagtcgacaaagcaatggagcgcgcgcagaaagcccagcgc
gatcgcgagcaaggccagcacggtctcttcggcctctttgacgacacacccgcgcacggc
cagaagaacggcgacgacctgcccaaggtccccgactgggaagagggcgagcgcctcgcc
aacgagaaagaagtcctcggcttcttcgtctccggccatccgctcgacaagtacgccgaa
aaactccgcaaccttcccggcatcatctcggtagctgaagccctagagcgcaagccgccc
gagcgtgtctggggcaagcagagcgatcccaccgatgaaatccaggttgccggcacactc
ctcggcatggccccgcgcaaaagcaagcgcgacggcaaaatctacgccatgggccacctt
gaagacgcctccggcaaaatcgacgtcatctgtttctcgcgcgactacgaacgcctcggc
gagcagctcaagactgaagctcccgtcgtcatccgcggcgtactcatgggtgaagaagac
tcagcgcccaagatctccatcagtggtgtgcagcctctcgatgccatgaaggtcaagctc
ccaggcggcatccgcatccgcatcaatctcgatcgcgccaccgaggaaatcttcgccacc
ctcaagtccgcagcggacgccgcacccggccccggcaaggtaatgcttcaactcgaacag
aaaggccagttcgccgtcatcctcgaacccgatcagatggccgtcgccgccgacaaaggc
tggatcgagcgcgtagaagacctcaccggccgcggtacagttcagatagtcggatag
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