Occallatibacter riparius: MOP44_26110
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Entry
MOP44_26110 CDS
T08486
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
orp
Occallatibacter riparius
Pathway
orp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
orp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MOP44_26110 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
orp03021
]
MOP44_26110 (rho)
03019 Messenger RNA biogenesis [BR:
orp03019
]
MOP44_26110 (rho)
Transcription machinery [BR:
orp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MOP44_26110 (rho)
Messenger RNA biogenesis [BR:
orp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MOP44_26110 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
NACHT
AAA_25
ATPase_2
AAA
OB_RNB
S1CSD-TOTE-2
Spore_III_AA
HHH_RecD2
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UWZ84020
UniProt:
A0A9J7BMB1
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All DBs
Position
6407059..6408309
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AA seq
416 aa
AA seq
DB search
MTIAELKEKNITELSRIARTLEIPGASGLRKQDLIFKILQAQSEKEGHIFADGVLEILPD
GYGFLRSPDYNYLPGPDDIYVSPSQIRKFDLKTGDSISGNVRPPHEGEKYFALVKIEAIN
FESPEETRNKILFDNLTPLYPQERIKLETVREAVSGRVMDLLTPIGKGQRGLIVAPPRTG
KTMLLQSLANSITANQPEVVLIVLLIDERPEEVTDMQRSVKGEVISSTFDEPAARHVQVA
EMVIEKAKRLVEHKRDVVILLDSITRLARAYNTIVPPSGKVLSGGVDSNALQRPKRFFGA
ARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNMEIILDRKLVDKRVFPAIDIQRS
GTRKEELLIPKEDLQRIWVLRKVLNPLSPVEAMELLISRLEKVRNNAEFLQNMNQL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgcagaacttaaagaaaagaacatcaccgaactgagccgcattgcgcgcacg
ctcgaaattcccggcgccagcggccttcgcaagcaggatctgatcttcaagatcctccag
gcccagagcgaaaaagaaggacacatcttcgctgacggcgtgctggagatcctccctgac
ggctacggcttccttcgctctcctgattacaactatctgccgggcccggacgacatctac
gtttcgccgtcgcagatccgcaagttcgacctcaaaaccggcgactccatcagcggcaac
gtccgcccgccgcacgaaggcgaaaagtacttcgcgctggtcaagatcgaggccatcaat
ttcgagtcacctgaagagacgcgcaacaagatcctcttcgacaacctgacgccgctctat
ccccaggagcgcatcaagctcgaaacggtgcgcgaagccgtcagcggccgcgtcatggat
ctgctcacccccatcggcaagggccagcgcggcctcatcgtcgctccgccccgtaccggc
aaaaccatgctgctccagtcgctggccaactccatcacggccaaccagcctgaagttgtg
ttgatcgttctgctcattgacgagcgtccggaagaagtcaccgacatgcagcgctcggtg
aagggcgaagtcatcagctccaccttcgacgagcccgcggcccgccacgtacaggtcgcc
gaaatggtcatcgagaaggccaagcgcctcgtcgagcacaagcgcgacgtcgtcatcctc
ctcgactcgatcacgcgtctcgcccgcgcctacaacaccatcgtgcctccgtcgggcaag
gtgctctcgggcggcgtcgactccaacgccctgcagcgccccaagcgcttcttcggcgcg
gcccgcaacatcgaagaaggcggctcgctcaccatcatcgccacggccctcgtcgacacc
ggctcccgcatggacgaagtcatcttcgaagagttcaagggcaccggcaacatggaaatc
attctcgaccgcaagctcgtcgacaagcgcgtattccccgccatcgacatccagcgcagc
ggcacccgtaaggaagagctgctcatacccaaggaagacctgcagcgcatctgggtcctc
cgcaaggtgctcaatccactctcgccggtggaagcgatggaactcctcatcagccgcctc
gagaaggtccgcaacaacgccgagttcctgcagaacatgaaccagctctaa
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