Ornithinimicrobium ciconiae: FNH13_01810
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Entry
FNH13_01810 CDS
T06094
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
orz
Ornithinimicrobium ciconiae
Pathway
orz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
orz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FNH13_01810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
orz03400
]
FNH13_01810
Enzymes [BR:
orz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
FNH13_01810
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FNH13_01810
DNA repair and recombination proteins [BR:
orz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FNH13_01810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Cys_rich_KTR
Zn_ribbon_8
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
QDO87216
UniProt:
A0A516G6Q9
LinkDB
All DBs
Position
412222..413082
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AA seq
286 aa
AA seq
DB search
MPELPEVQALVDFLDGRVVGRVVTDVELGSIAVLKTFNPPPDSLIGRPIDGTARHGKFID
LDVDGTHLVFHLARAGWLRFSEKMPTTRVRPGKSPIALRVRLDDDSGFDLTEAGTKKGLA
AYVVDDPQEVPAIATLGPDPLGEDFTRELFGQILAGKRTQIKGLLRSQGTIAGVGNAYSD
EILHAARLSPFAIADKLTEEQVDTLYAVLREILQGAVAHSSGKPAAELKDAKRKGMAVHG
RTGQECPVCGDTVREVSFADTSLQYCPTCQTGGKPLADRRMSRLLK
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgcccgaggtccaggccctggtcgacttcctggacggtcgggtcgtgggt
cgggtcgtgacggatgtcgagttgggctccatcgcggtgctcaagaccttcaacccgcca
ccggactccctcatcgggcgaccgatcgacgggaccgcccggcacggcaagttcatcgac
ctcgacgtggacgggacgcacctggtcttccatctggcccgcgccgggtggctgcgcttc
tccgagaagatgccgaccacccgcgtgcggccgggcaagtcaccgatcgccctgcgtgtg
cgcctcgacgacgactcgggcttcgacctcaccgaggcgggcaccaagaagggcctggcg
gcatacgtcgtggacgacccgcaggaggtgccggccatcgccaccctgggacctgacccg
ctgggtgaggacttcacccgtgagctgttcgggcagatcctggcgggcaagcgcacccag
atcaagggcctgctgcgcagccagggcacgatcgcgggggtcggcaacgcctactcggac
gagatcctgcacgcggcccgcctctcccccttcgcgatcgccgacaagctcaccgaggag
caggtcgacacgctgtatgccgtgctccgcgagatcctgcagggtgccgtcgcgcacagc
tccggcaagccggccgccgagctcaaggacgccaagcgcaagggcatggcggtccacggc
cgcaccggacaggagtgtccggtctgtggtgacacggtccgcgaggtgagttttgccgac
acctcgctgcagtactgcccgacctgtcagaccggtggcaagccgctggcggaccgtcgg
atgagccgactgctgaaataa
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